Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CUEDC1Q9NWM3 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CUEDC1Q9NWM3 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CUEDC1Q9NWM3 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC6.13□□□□□ -1.43
CUEDC1Q9NWM3 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CUEDC1Q9NWM3 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.13□□□□□ -1.43
CUEDC1Q9NWM3 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
CUEDC1Q9NWM3 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.13□□□□□ -1.43
CUEDC1Q9NWM3 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.13□□□□□ -1.43
CUEDC1Q9NWM3 SNORD113-1-201ENST00000365321 69 ntBASIC6.13□□□□□ -1.43
CUEDC1Q9NWM3 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CUEDC1Q9NWM3 Y_RNA.424-201ENST00000384063 103 ntBASIC6.13□□□□□ -1.43
CUEDC1Q9NWM3 RNU6-1029P-201ENST00000384109 107 ntBASIC6.13□□□□□ -1.43
CUEDC1Q9NWM3 RNU6-662P-201ENST00000384253 104 ntBASIC6.13□□□□□ -1.43
CUEDC1Q9NWM3 RPSAP35-201ENST00000413753 818 ntBASIC6.13□□□□□ -1.43
CUEDC1Q9NWM3 AC243428.1-201ENST00000421099 264 ntBASIC6.13□□□□□ -1.43
CUEDC1Q9NWM3 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
CUEDC1Q9NWM3 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC6.13□□□□□ -1.43
CUEDC1Q9NWM3 OSTCP4-201ENST00000424397 449 ntBASIC6.13□□□□□ -1.43
CUEDC1Q9NWM3 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.13□□□□□ -1.43
CUEDC1Q9NWM3 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC6.13□□□□□ -1.43
CUEDC1Q9NWM3 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.13□□□□□ -1.43
CUEDC1Q9NWM3 MTATP6P16-201ENST00000434543 526 ntBASIC6.13□□□□□ -1.43
CUEDC1Q9NWM3 GAPDHP59-201ENST00000435908 267 ntBASIC6.13□□□□□ -1.43
CUEDC1Q9NWM3 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC6.13□□□□□ -1.43
CUEDC1Q9NWM3 AP000281.1-201ENST00000444036 316 ntBASIC6.13□□□□□ -1.43
CUEDC1Q9NWM3 AC020550.1-201ENST00000447385 163 ntBASIC6.13□□□□□ -1.43
CUEDC1Q9NWM3 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC6.13□□□□□ -1.43
CUEDC1Q9NWM3 RPL39P38-201ENST00000467018 153 ntBASIC6.13□□□□□ -1.43
CUEDC1Q9NWM3 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC6.13□□□□□ -1.43
CUEDC1Q9NWM3 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.13□□□□□ -1.43
CUEDC1Q9NWM3 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC6.13□□□□□ -1.43
CUEDC1Q9NWM3 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC6.13□□□□□ -1.43
CUEDC1Q9NWM3 AC008526.1-201ENST00000509149 338 ntBASIC6.13□□□□□ -1.43
CUEDC1Q9NWM3 AC116337.1-201ENST00000509680 687 ntBASIC6.13□□□□□ -1.43
CUEDC1Q9NWM3 MTND1P19-201ENST00000511780 315 ntBASIC6.13□□□□□ -1.43
CUEDC1Q9NWM3 PRMT5P1-201ENST00000514351 598 ntBASIC6.13□□□□□ -1.43
CUEDC1Q9NWM3 AC022868.1-201ENST00000517767 391 ntBASIC6.13□□□□□ -1.43
CUEDC1Q9NWM3 AC011979.2-201ENST00000527568 352 ntBASIC6.13□□□□□ -1.43
CUEDC1Q9NWM3 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC6.13□□□□□ -1.43
CUEDC1Q9NWM3 DEFB109D-201ENST00000529497 240 ntBASIC6.13□□□□□ -1.43
CUEDC1Q9NWM3 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC6.13□□□□□ -1.43
CUEDC1Q9NWM3 CYCSP28-201ENST00000534284 321 ntBASIC6.13□□□□□ -1.43
CUEDC1Q9NWM3 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC6.13□□□□□ -1.43
CUEDC1Q9NWM3 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC6.13□□□□□ -1.43
CUEDC1Q9NWM3 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.13□□□□□ -1.43
CUEDC1Q9NWM3 AC233702.7-202ENST00000582941 211 ntBASIC6.13□□□□□ -1.43
CUEDC1Q9NWM3 AC011445.2-201ENST00000599274 173 ntBASIC6.13□□□□□ -1.43
CUEDC1Q9NWM3 Z98751.3-201ENST00000604447 521 ntBASIC6.13□□□□□ -1.43
CUEDC1Q9NWM3 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC6.13□□□□□ -1.43
CUEDC1Q9NWM3 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
CUEDC1Q9NWM3 AC244100.1-202ENST00000621554 382 ntBASIC6.13□□□□□ -1.43
CUEDC1Q9NWM3 AC132825.6-201ENST00000638861 357 ntBASIC6.13□□□□□ -1.43
CUEDC1Q9NWM3 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
CUEDC1Q9NWM3 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.13□□□□□ -1.43
CUEDC1Q9NWM3 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
CUEDC1Q9NWM3 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC6.13□□□□□ -1.43
CUEDC1Q9NWM3 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CUEDC1Q9NWM3 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CUEDC1Q9NWM3 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.13□□□□□ -1.43
CUEDC1Q9NWM3 AC091812.1-201ENST00000432235 1948 ntBASIC6.13□□□□□ -1.43
CUEDC1Q9NWM3 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
CUEDC1Q9NWM3 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CUEDC1Q9NWM3 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CUEDC1Q9NWM3 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CUEDC1Q9NWM3 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
CUEDC1Q9NWM3 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
CUEDC1Q9NWM3 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CUEDC1Q9NWM3 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CUEDC1Q9NWM3 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.12□□□□□ -1.43
CUEDC1Q9NWM3 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.12□□□□□ -1.43
CUEDC1Q9NWM3 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.12□□□□□ -1.43
CUEDC1Q9NWM3 Y_RNA.210-201ENST00000364161 110 ntBASIC6.12□□□□□ -1.43
CUEDC1Q9NWM3 RNU6-39P-201ENST00000384344 107 ntBASIC6.12□□□□□ -1.43
CUEDC1Q9NWM3 SNORA70.9-201ENST00000384370 135 ntBASIC6.12□□□□□ -1.43
CUEDC1Q9NWM3 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
CUEDC1Q9NWM3 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.12□□□□□ -1.43
CUEDC1Q9NWM3 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.12□□□□□ -1.43
CUEDC1Q9NWM3 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.12□□□□□ -1.43
CUEDC1Q9NWM3 AL133482.1-201ENST00000415988 498 ntBASIC6.12□□□□□ -1.43
CUEDC1Q9NWM3 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CUEDC1Q9NWM3 RPL12P12-201ENST00000424633 501 ntBASIC6.12□□□□□ -1.43
CUEDC1Q9NWM3 AL606753.1-201ENST00000427435 87 ntBASIC6.12□□□□□ -1.43
CUEDC1Q9NWM3 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC6.12□□□□□ -1.43
CUEDC1Q9NWM3 CEP57L1P1-201ENST00000430943 1201 ntBASIC6.12□□□□□ -1.43
CUEDC1Q9NWM3 RPL23AP74-201ENST00000437246 471 ntBASIC6.12□□□□□ -1.43
CUEDC1Q9NWM3 REG1CP-206ENST00000447469 496 ntBASIC6.12□□□□□ -1.43
CUEDC1Q9NWM3 AL118520.1-201ENST00000450770 291 ntBASIC6.12□□□□□ -1.43
CUEDC1Q9NWM3 AC112492.4-201ENST00000456549 352 ntBASIC6.12□□□□□ -1.43
CUEDC1Q9NWM3 SETP20-201ENST00000457046 852 ntBASIC6.12□□□□□ -1.43
CUEDC1Q9NWM3 SNX18P26-201ENST00000458433 740 ntBASIC6.12□□□□□ -1.43
CUEDC1Q9NWM3 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC6.12□□□□□ -1.43
CUEDC1Q9NWM3 RN7SL552P-201ENST00000462094 276 ntBASIC6.12□□□□□ -1.43
CUEDC1Q9NWM3 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC6.12□□□□□ -1.43
CUEDC1Q9NWM3 RN7SL714P-201ENST00000487050 298 ntBASIC6.12□□□□□ -1.43
CUEDC1Q9NWM3 AC116562.3-201ENST00000506136 177 ntBASIC6.12□□□□□ -1.43
CUEDC1Q9NWM3 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CUEDC1Q9NWM3 TXNP6-201ENST00000510190 310 ntBASIC6.12□□□□□ -1.43
CUEDC1Q9NWM3 RNA5SP206-201ENST00000516703 121 ntBASIC6.12□□□□□ -1.43
CUEDC1Q9NWM3 AC060775.1-201ENST00000518241 520 ntBASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms