Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.5□□□□□ -1.53
PDLIM7Q9NR12 AC009159.1-201ENST00000618386 642 ntBASIC5.5□□□□□ -1.53
PDLIM7Q9NR12 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.5□□□□□ -1.53
PDLIM7Q9NR12 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC5.5□□□□□ -1.53
PDLIM7Q9NR12 MIR3662-201ENST00000637030 95 ntBASIC5.5□□□□□ -1.53
PDLIM7Q9NR12 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
PDLIM7Q9NR12 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PDLIM7Q9NR12 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PDLIM7Q9NR12 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PDLIM7Q9NR12 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.5□□□□□ -1.53
PDLIM7Q9NR12 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PDLIM7Q9NR12 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PDLIM7Q9NR12 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
PDLIM7Q9NR12 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
PDLIM7Q9NR12 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.49□□□□□ -1.53
PDLIM7Q9NR12 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC5.49□□□□□ -1.53
PDLIM7Q9NR12 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PDLIM7Q9NR12 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC5.49□□□□□ -1.53
PDLIM7Q9NR12 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.49□□□□□ -1.53
PDLIM7Q9NR12 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
PDLIM7Q9NR12 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC5.49□□□□□ -1.53
PDLIM7Q9NR12 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PDLIM7Q9NR12 AC006378.2-201ENST00000623178 2476 ntBASIC5.49□□□□□ -1.53
PDLIM7Q9NR12 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PDLIM7Q9NR12 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PDLIM7Q9NR12 Y_RNA.1-201ENST00000352915 104 ntBASIC5.49□□□□□ -1.53
PDLIM7Q9NR12 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
PDLIM7Q9NR12 RNU6-483P-201ENST00000384088 108 ntBASIC5.49□□□□□ -1.53
PDLIM7Q9NR12 SNORA5.1-201ENST00000384275 131 ntBASIC5.49□□□□□ -1.53
PDLIM7Q9NR12 RPL31P1-201ENST00000398116 372 ntBASIC5.49□□□□□ -1.53
PDLIM7Q9NR12 AL356057.2-201ENST00000403318 432 ntBASIC5.49□□□□□ -1.53
PDLIM7Q9NR12 RNU6-603P-201ENST00000411403 107 ntBASIC5.49□□□□□ -1.53
PDLIM7Q9NR12 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PDLIM7Q9NR12 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.49□□□□□ -1.53
PDLIM7Q9NR12 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC5.49□□□□□ -1.53
PDLIM7Q9NR12 DYNLL1P7-201ENST00000429273 258 ntBASIC5.49□□□□□ -1.53
PDLIM7Q9NR12 OR2B7P-201ENST00000429302 934 ntBASIC5.49□□□□□ -1.53
PDLIM7Q9NR12 AC104850.1-201ENST00000435940 476 ntBASIC5.49□□□□□ -1.53
PDLIM7Q9NR12 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC5.49□□□□□ -1.53
PDLIM7Q9NR12 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5.49□□□□□ -1.53
PDLIM7Q9NR12 SKP1P1-201ENST00000438081 489 ntBASIC5.49□□□□□ -1.53
PDLIM7Q9NR12 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC5.49□□□□□ -1.53
PDLIM7Q9NR12 Z82190.1-201ENST00000454534 490 ntBASIC5.49□□□□□ -1.53
PDLIM7Q9NR12 PMCHL2-203ENST00000457791 237 ntBASIC5.49□□□□□ -1.53
PDLIM7Q9NR12 AC087312.1-201ENST00000471411 480 ntBASIC5.49□□□□□ -1.53
PDLIM7Q9NR12 HMGN1P10-201ENST00000474557 553 ntBASIC5.49□□□□□ -1.53
PDLIM7Q9NR12 SNRPCP3-201ENST00000474888 476 ntBASIC5.49□□□□□ -1.53
PDLIM7Q9NR12 RPS29P25-201ENST00000481709 171 ntBASIC5.49□□□□□ -1.53
PDLIM7Q9NR12 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC5.49□□□□□ -1.53
PDLIM7Q9NR12 AC010493.1-201ENST00000513479 292 ntBASIC5.49□□□□□ -1.53
PDLIM7Q9NR12 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC5.49□□□□□ -1.53
PDLIM7Q9NR12 SCARNA15.1-201ENST00000516384 125 ntBASIC5.49□□□□□ -1.53
PDLIM7Q9NR12 RNU6-347P-201ENST00000516658 105 ntBASIC5.49□□□□□ -1.53
PDLIM7Q9NR12 LY96-202ENST00000518893 430 ntTSL 3 BASIC5.49□□□□□ -1.53
PDLIM7Q9NR12 ARL2BPP5-201ENST00000523141 481 ntBASIC5.49□□□□□ -1.53
PDLIM7Q9NR12 AF235103.2-201ENST00000525753 346 ntBASIC5.49□□□□□ -1.53
PDLIM7Q9NR12 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.49□□□□□ -1.53
PDLIM7Q9NR12 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC5.49□□□□□ -1.53
PDLIM7Q9NR12 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC5.49□□□□□ -1.53
PDLIM7Q9NR12 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC5.49□□□□□ -1.53
PDLIM7Q9NR12 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC5.49□□□□□ -1.53
PDLIM7Q9NR12 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC5.49□□□□□ -1.53
PDLIM7Q9NR12 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC5.49□□□□□ -1.53
PDLIM7Q9NR12 AC243773.3-201ENST00000613270 256 ntBASIC5.49□□□□□ -1.53
PDLIM7Q9NR12 DLEU1_2.1-201ENST00000617920 342 ntBASIC5.49□□□□□ -1.53
PDLIM7Q9NR12 PACRG-211ENST00000621363 360 ntTSL 5 BASIC5.49□□□□□ -1.53
PDLIM7Q9NR12 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.49□□□□□ -1.53
PDLIM7Q9NR12 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.49□□□□□ -1.53
PDLIM7Q9NR12 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PDLIM7Q9NR12 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.49□□□□□ -1.53
PDLIM7Q9NR12 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PDLIM7Q9NR12 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC5.49□□□□□ -1.53
PDLIM7Q9NR12 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PDLIM7Q9NR12 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
PDLIM7Q9NR12 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
PDLIM7Q9NR12 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
PDLIM7Q9NR12 ZNF652P1-201ENST00000442420 1309 ntBASIC5.48□□□□□ -1.53
PDLIM7Q9NR12 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
PDLIM7Q9NR12 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PDLIM7Q9NR12 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
PDLIM7Q9NR12 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.48□□□□□ -1.53
PDLIM7Q9NR12 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
PDLIM7Q9NR12 RNU6-1085P-201ENST00000363576 107 ntBASIC5.48□□□□□ -1.53
PDLIM7Q9NR12 RNU6-777P-201ENST00000364265 104 ntBASIC5.48□□□□□ -1.53
PDLIM7Q9NR12 Y_RNA.356-201ENST00000365475 113 ntBASIC5.48□□□□□ -1.53
PDLIM7Q9NR12 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC5.48□□□□□ -1.53
PDLIM7Q9NR12 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC5.48□□□□□ -1.53
PDLIM7Q9NR12 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
PDLIM7Q9NR12 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
PDLIM7Q9NR12 RNA5SP345-201ENST00000410646 108 ntBASIC5.48□□□□□ -1.53
PDLIM7Q9NR12 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.48□□□□□ -1.53
PDLIM7Q9NR12 AMD1P2-201ENST00000412936 992 ntBASIC5.48□□□□□ -1.53
PDLIM7Q9NR12 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC5.48□□□□□ -1.53
PDLIM7Q9NR12 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC5.48□□□□□ -1.53
PDLIM7Q9NR12 ISCA1P6-201ENST00000427740 390 ntBASIC5.48□□□□□ -1.53
PDLIM7Q9NR12 ARL2BPP10-201ENST00000446487 531 ntBASIC5.48□□□□□ -1.53
PDLIM7Q9NR12 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.48□□□□□ -1.53
PDLIM7Q9NR12 AC079448.1-201ENST00000449377 373 ntBASIC5.48□□□□□ -1.53
PDLIM7Q9NR12 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC5.48□□□□□ -1.53
PDLIM7Q9NR12 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms