Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.44□□□□□ -1.7
EBF3Q9H4W6 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.44□□□□□ -1.7
EBF3Q9H4W6 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.44□□□□□ -1.7
EBF3Q9H4W6 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.44□□□□□ -1.7
EBF3Q9H4W6 AC093648.1-201ENST00000623546 606 ntBASIC4.44□□□□□ -1.7
EBF3Q9H4W6 AL008636.1-201ENST00000625038 1018 ntBASIC4.44□□□□□ -1.7
EBF3Q9H4W6 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
EBF3Q9H4W6 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
EBF3Q9H4W6 AC093311.1-201ENST00000506586 2021 ntBASIC4.44□□□□□ -1.7
EBF3Q9H4W6 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
EBF3Q9H4W6 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
EBF3Q9H4W6 AP000776.1-201ENST00000530032 1663 ntBASIC4.44□□□□□ -1.7
EBF3Q9H4W6 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.44□□□□□ -1.7
EBF3Q9H4W6 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
EBF3Q9H4W6 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
EBF3Q9H4W6 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
EBF3Q9H4W6 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
EBF3Q9H4W6 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.44□□□□□ -1.7
EBF3Q9H4W6 AL450326.2-201ENST00000421913 1962 ntBASIC4.44□□□□□ -1.7
EBF3Q9H4W6 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.43□□□□□ -1.7
EBF3Q9H4W6 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
EBF3Q9H4W6 AC100871.1-201ENST00000507871 1456 ntBASIC4.43□□□□□ -1.7
EBF3Q9H4W6 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.43□□□□□ -1.7
EBF3Q9H4W6 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.43□□□□□ -1.7
EBF3Q9H4W6 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
EBF3Q9H4W6 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
EBF3Q9H4W6 AL672167.1-206ENST00000356293 943 ntBASIC4.43□□□□□ -1.7
EBF3Q9H4W6 RNU4-21P-201ENST00000362802 126 ntBASIC4.43□□□□□ -1.7
EBF3Q9H4W6 Y_RNA.88-201ENST00000363029 99 ntBASIC4.43□□□□□ -1.7
EBF3Q9H4W6 RNU6-560P-201ENST00000364007 108 ntBASIC4.43□□□□□ -1.7
EBF3Q9H4W6 RNA5SP151-201ENST00000365632 117 ntBASIC4.43□□□□□ -1.7
EBF3Q9H4W6 MIR23B-201ENST00000384832 97 ntBASIC4.43□□□□□ -1.7
EBF3Q9H4W6 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
EBF3Q9H4W6 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
EBF3Q9H4W6 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC4.43□□□□□ -1.7
EBF3Q9H4W6 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.43□□□□□ -1.7
EBF3Q9H4W6 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.43□□□□□ -1.7
EBF3Q9H4W6 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.43□□□□□ -1.7
EBF3Q9H4W6 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
EBF3Q9H4W6 AC062016.2-201ENST00000420950 676 ntBASIC4.43□□□□□ -1.7
EBF3Q9H4W6 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
EBF3Q9H4W6 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.43□□□□□ -1.7
EBF3Q9H4W6 NANOGP6-201ENST00000429190 847 ntBASIC4.43□□□□□ -1.7
EBF3Q9H4W6 CDY14P-201ENST00000431260 1014 ntBASIC4.43□□□□□ -1.7
EBF3Q9H4W6 AL139415.2-201ENST00000431968 163 ntBASIC4.43□□□□□ -1.7
EBF3Q9H4W6 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.43□□□□□ -1.7
EBF3Q9H4W6 AC234064.1-201ENST00000436312 247 ntBASIC4.43□□□□□ -1.7
EBF3Q9H4W6 AL451050.1-201ENST00000450126 415 ntBASIC4.43□□□□□ -1.7
EBF3Q9H4W6 CDY23P-201ENST00000451661 1014 ntBASIC4.43□□□□□ -1.7
EBF3Q9H4W6 DDX39BP2-208ENST00000453923 258 ntBASIC4.43□□□□□ -1.7
EBF3Q9H4W6 AL359385.1-201ENST00000456509 365 ntBASIC4.43□□□□□ -1.7
EBF3Q9H4W6 RNU6-956P-201ENST00000458868 103 ntBASIC4.43□□□□□ -1.7
EBF3Q9H4W6 SNORA84-201ENST00000459229 133 ntBASIC4.43□□□□□ -1.7
EBF3Q9H4W6 RPL7P48-201ENST00000461513 746 ntBASIC4.43□□□□□ -1.7
EBF3Q9H4W6 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.43□□□□□ -1.7
EBF3Q9H4W6 RN7SL809P-201ENST00000482040 297 ntBASIC4.43□□□□□ -1.7
EBF3Q9H4W6 AC104687.1-201ENST00000485829 412 ntBASIC4.43□□□□□ -1.7
EBF3Q9H4W6 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC4.43□□□□□ -1.7
EBF3Q9H4W6 DSTNP2-201ENST00000504533 515 ntBASIC4.43□□□□□ -1.7
EBF3Q9H4W6 AC020593.1-201ENST00000507399 299 ntBASIC4.43□□□□□ -1.7
EBF3Q9H4W6 AC023632.1-201ENST00000518463 375 ntBASIC4.43□□□□□ -1.7
EBF3Q9H4W6 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC4.43□□□□□ -1.7
EBF3Q9H4W6 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.43□□□□□ -1.7
EBF3Q9H4W6 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.43□□□□□ -1.7
EBF3Q9H4W6 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
EBF3Q9H4W6 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.43□□□□□ -1.7
EBF3Q9H4W6 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.43□□□□□ -1.7
EBF3Q9H4W6 EEF1B2P4-201ENST00000551398 348 ntBASIC4.43□□□□□ -1.7
EBF3Q9H4W6 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.43□□□□□ -1.7
EBF3Q9H4W6 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.43□□□□□ -1.7
EBF3Q9H4W6 AC044913.1-201ENST00000557200 430 ntBASIC4.43□□□□□ -1.7
EBF3Q9H4W6 ROCK1P1-201ENST00000573767 549 ntBASIC4.43□□□□□ -1.7
EBF3Q9H4W6 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.43□□□□□ -1.7
EBF3Q9H4W6 MIR4719-201ENST00000585233 84 ntBASIC4.43□□□□□ -1.7
EBF3Q9H4W6 U73023.1-201ENST00000603134 700 ntBASIC4.43□□□□□ -1.7
EBF3Q9H4W6 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.43□□□□□ -1.7
EBF3Q9H4W6 AL391497.1-201ENST00000608671 547 ntBASIC4.43□□□□□ -1.7
EBF3Q9H4W6 AP000238.1-201ENST00000608759 426 ntBASIC4.43□□□□□ -1.7
EBF3Q9H4W6 Z99129.1-201ENST00000612510 255 ntBASIC4.43□□□□□ -1.7
EBF3Q9H4W6 AC008498.1-201ENST00000613012 531 ntBASIC4.43□□□□□ -1.7
EBF3Q9H4W6 AC008083.4-201ENST00000615076 444 ntBASIC4.43□□□□□ -1.7
EBF3Q9H4W6 AC145207.9-201ENST00000623802 325 ntBASIC4.43□□□□□ -1.7
EBF3Q9H4W6 AC008785.1-201ENST00000624475 456 ntBASIC4.43□□□□□ -1.7
EBF3Q9H4W6 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC4.43□□□□□ -1.7
EBF3Q9H4W6 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
EBF3Q9H4W6 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC4.43□□□□□ -1.7
EBF3Q9H4W6 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.43□□□□□ -1.7
EBF3Q9H4W6 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
EBF3Q9H4W6 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.43□□□□□ -1.7
EBF3Q9H4W6 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
EBF3Q9H4W6 HSPA8P17-201ENST00000427029 1382 ntBASIC4.42□□□□□ -1.7
EBF3Q9H4W6 CR848007.1-201ENST00000442354 1699 ntBASIC4.42□□□□□ -1.7
EBF3Q9H4W6 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.42□□□□□ -1.7
EBF3Q9H4W6 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
EBF3Q9H4W6 RNA5SP130-201ENST00000364431 114 ntBASIC4.42□□□□□ -1.7
EBF3Q9H4W6 Y_RNA.248-201ENST00000364501 109 ntBASIC4.42□□□□□ -1.7
EBF3Q9H4W6 RNU6-707P-201ENST00000364647 95 ntBASIC4.42□□□□□ -1.7
EBF3Q9H4W6 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
EBF3Q9H4W6 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
EBF3Q9H4W6 AL359837.1-201ENST00000381357 287 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms