Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 AC122718.1-201ENST00000439448 744 ntBASIC5.36□□□□□ -1.55
TRIM55Q9BYV6 USP9YP15-201ENST00000442391 422 ntBASIC5.36□□□□□ -1.55
TRIM55Q9BYV6 AL136380.1-201ENST00000447970 162 ntBASIC5.36□□□□□ -1.55
TRIM55Q9BYV6 AC132479.1-201ENST00000449160 144 ntBASIC5.36□□□□□ -1.55
TRIM55Q9BYV6 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.36□□□□□ -1.55
TRIM55Q9BYV6 MTND1P12-201ENST00000455231 147 ntBASIC5.36□□□□□ -1.55
TRIM55Q9BYV6 FAM133DP-201ENST00000464802 691 ntBASIC5.36□□□□□ -1.55
TRIM55Q9BYV6 AC023598.1-201ENST00000472521 361 ntBASIC5.36□□□□□ -1.55
TRIM55Q9BYV6 RN7SL727P-201ENST00000482164 296 ntBASIC5.36□□□□□ -1.55
TRIM55Q9BYV6 AC007182.2-201ENST00000489251 402 ntBASIC5.36□□□□□ -1.55
TRIM55Q9BYV6 ARL4AP2-201ENST00000507378 601 ntBASIC5.36□□□□□ -1.55
TRIM55Q9BYV6 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC5.36□□□□□ -1.55
TRIM55Q9BYV6 PGBD4P4-201ENST00000509673 613 ntBASIC5.36□□□□□ -1.55
TRIM55Q9BYV6 AC009646.1-201ENST00000510455 318 ntBASIC5.36□□□□□ -1.55
TRIM55Q9BYV6 RNU6-445P-201ENST00000516949 107 ntBASIC5.36□□□□□ -1.55
TRIM55Q9BYV6 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.36□□□□□ -1.55
TRIM55Q9BYV6 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC5.36□□□□□ -1.55
TRIM55Q9BYV6 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.36□□□□□ -1.55
TRIM55Q9BYV6 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC5.36□□□□□ -1.55
TRIM55Q9BYV6 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC5.36□□□□□ -1.55
TRIM55Q9BYV6 AC011840.5-201ENST00000582125 771 ntBASIC5.36□□□□□ -1.55
TRIM55Q9BYV6 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC5.36□□□□□ -1.55
TRIM55Q9BYV6 AC010680.4-201ENST00000605334 543 ntBASIC5.36□□□□□ -1.55
TRIM55Q9BYV6 AP002360.4-201ENST00000606980 481 ntBASIC5.36□□□□□ -1.55
TRIM55Q9BYV6 AC244107.2-201ENST00000611773 76 ntBASIC5.36□□□□□ -1.55
TRIM55Q9BYV6 AC099669.2-201ENST00000616549 437 ntBASIC5.36□□□□□ -1.55
TRIM55Q9BYV6 AC118658.2-201ENST00000618697 459 ntBASIC5.36□□□□□ -1.55
TRIM55Q9BYV6 AC112204.3-201ENST00000623822 332 ntBASIC5.36□□□□□ -1.55
TRIM55Q9BYV6 CR381572.1-201ENST00000625098 102 ntBASIC5.36□□□□□ -1.55
TRIM55Q9BYV6 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.36□□□□□ -1.55
TRIM55Q9BYV6 MIR3688-2-201ENST00000636963 87 ntBASIC5.36□□□□□ -1.55
TRIM55Q9BYV6 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
TRIM55Q9BYV6 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC5.36□□□□□ -1.55
TRIM55Q9BYV6 AC004520.1-201ENST00000608362 1413 ntBASIC5.36□□□□□ -1.55
TRIM55Q9BYV6 AC027287.1-201ENST00000553115 1453 ntBASIC5.36□□□□□ -1.55
TRIM55Q9BYV6 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM55Q9BYV6 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM55Q9BYV6 AC000374.1-201ENST00000434698 1745 ntBASIC5.36□□□□□ -1.55
TRIM55Q9BYV6 HSP90AA5P-201ENST00000438353 2192 ntBASIC5.36□□□□□ -1.55
TRIM55Q9BYV6 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM55Q9BYV6 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM55Q9BYV6 LINC01963-201ENST00000562038 3148 ntBASIC5.36□□□□□ -1.55
TRIM55Q9BYV6 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
TRIM55Q9BYV6 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.36□□□□□ -1.55
TRIM55Q9BYV6 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM55Q9BYV6 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM55Q9BYV6 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM55Q9BYV6 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM55Q9BYV6 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.35□□□□□ -1.55
TRIM55Q9BYV6 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM55Q9BYV6 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
TRIM55Q9BYV6 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM55Q9BYV6 PABPC1P6-201ENST00000445594 1829 ntBASIC5.35□□□□□ -1.55
TRIM55Q9BYV6 USP44-208ENST00000552440 1818 ntTSL 5 BASIC5.35□□□□□ -1.55
TRIM55Q9BYV6 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC5.35□□□□□ -1.55
TRIM55Q9BYV6 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM55Q9BYV6 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC5.35□□□□□ -1.55
TRIM55Q9BYV6 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM55Q9BYV6 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM55Q9BYV6 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM55Q9BYV6 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
TRIM55Q9BYV6 RNU6-780P-201ENST00000391030 104 ntBASIC5.35□□□□□ -1.55
TRIM55Q9BYV6 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC5.35□□□□□ -1.55
TRIM55Q9BYV6 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC5.35□□□□□ -1.55
TRIM55Q9BYV6 SLC35E1P1-201ENST00000419313 864 ntBASIC5.35□□□□□ -1.55
TRIM55Q9BYV6 AC104333.2-201ENST00000422630 192 ntBASIC5.35□□□□□ -1.55
TRIM55Q9BYV6 AC000111.3-201ENST00000433478 193 ntBASIC5.35□□□□□ -1.55
TRIM55Q9BYV6 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM55Q9BYV6 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC5.35□□□□□ -1.55
TRIM55Q9BYV6 AL353572.1-201ENST00000442490 417 ntBASIC5.35□□□□□ -1.55
TRIM55Q9BYV6 AL512326.1-201ENST00000443050 721 ntBASIC5.35□□□□□ -1.55
TRIM55Q9BYV6 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.35□□□□□ -1.55
TRIM55Q9BYV6 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
TRIM55Q9BYV6 AC100832.1-201ENST00000471945 383 ntBASIC5.35□□□□□ -1.55
TRIM55Q9BYV6 ST13P14-201ENST00000474095 734 ntBASIC5.35□□□□□ -1.55
TRIM55Q9BYV6 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC5.35□□□□□ -1.55
TRIM55Q9BYV6 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC5.35□□□□□ -1.55
TRIM55Q9BYV6 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.35□□□□□ -1.55
TRIM55Q9BYV6 RPS3AP4-201ENST00000555161 764 ntBASIC5.35□□□□□ -1.55
TRIM55Q9BYV6 AL390726.5-202ENST00000564800 256 ntBASIC5.35□□□□□ -1.55
TRIM55Q9BYV6 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.35□□□□□ -1.55
TRIM55Q9BYV6 AC022884.2-201ENST00000578535 580 ntBASIC5.35□□□□□ -1.55
TRIM55Q9BYV6 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.35□□□□□ -1.55
TRIM55Q9BYV6 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.35□□□□□ -1.55
TRIM55Q9BYV6 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.35□□□□□ -1.55
TRIM55Q9BYV6 ELOCP28-201ENST00000590044 317 ntBASIC5.35□□□□□ -1.55
TRIM55Q9BYV6 AC063977.5-201ENST00000601044 974 ntBASIC5.35□□□□□ -1.55
TRIM55Q9BYV6 AL391646.1-201ENST00000603860 190 ntBASIC5.35□□□□□ -1.55
TRIM55Q9BYV6 RDM1-219ENST00000615378 542 ntTSL 3 BASIC5.35□□□□□ -1.55
TRIM55Q9BYV6 MIR8080-201ENST00000622224 89 ntBASIC5.35□□□□□ -1.55
TRIM55Q9BYV6 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
TRIM55Q9BYV6 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.35□□□□□ -1.55
TRIM55Q9BYV6 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.35□□□□□ -1.55
TRIM55Q9BYV6 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
TRIM55Q9BYV6 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM55Q9BYV6 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM55Q9BYV6 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
TRIM55Q9BYV6 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM55Q9BYV6 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.35□□□□□ -1.55
TRIM55Q9BYV6 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms