Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC6.02□□□□□ -1.45
COL25A1Q9BXS0 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC6.02□□□□□ -1.45
COL25A1Q9BXS0 TXNP6-201ENST00000510190 310 ntBASIC6.02□□□□□ -1.45
COL25A1Q9BXS0 AC021146.3-201ENST00000511911 260 ntBASIC6.02□□□□□ -1.45
COL25A1Q9BXS0 RNA5SP503-201ENST00000517047 117 ntBASIC6.02□□□□□ -1.45
COL25A1Q9BXS0 RNU6-570P-201ENST00000517051 105 ntBASIC6.02□□□□□ -1.45
COL25A1Q9BXS0 AC022559.1-201ENST00000520905 205 ntBASIC6.02□□□□□ -1.45
COL25A1Q9BXS0 CARD16-203ENST00000525374 503 ntTSL 3 BASIC6.02□□□□□ -1.45
COL25A1Q9BXS0 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC6.02□□□□□ -1.45
COL25A1Q9BXS0 AC040926.1-201ENST00000530195 238 ntBASIC6.02□□□□□ -1.45
COL25A1Q9BXS0 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COL25A1Q9BXS0 OR11H5P-201ENST00000554039 926 ntBASIC6.02□□□□□ -1.45
COL25A1Q9BXS0 AL049839.1-201ENST00000556151 657 ntBASIC6.02□□□□□ -1.45
COL25A1Q9BXS0 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC6.02□□□□□ -1.45
COL25A1Q9BXS0 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC6.02□□□□□ -1.45
COL25A1Q9BXS0 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC6.02□□□□□ -1.45
COL25A1Q9BXS0 AC012669.1-201ENST00000603209 283 ntBASIC6.02□□□□□ -1.45
COL25A1Q9BXS0 AC010900.2-201ENST00000604508 210 ntBASIC6.02□□□□□ -1.45
COL25A1Q9BXS0 RAC1P9-201ENST00000604990 392 ntBASIC6.02□□□□□ -1.45
COL25A1Q9BXS0 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.02□□□□□ -1.45
COL25A1Q9BXS0 LDHA-225ENST00000625635 141 ntTSL 5 BASIC6.02□□□□□ -1.45
COL25A1Q9BXS0 PABPC1P7-201ENST00000413177 1513 ntBASIC6.02□□□□□ -1.45
COL25A1Q9BXS0 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COL25A1Q9BXS0 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
COL25A1Q9BXS0 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
COL25A1Q9BXS0 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.02□□□□□ -1.45
COL25A1Q9BXS0 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COL25A1Q9BXS0 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
COL25A1Q9BXS0 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC6.02□□□□□ -1.45
COL25A1Q9BXS0 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
COL25A1Q9BXS0 SLC36A2-201ENST00000335244 3421 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
COL25A1Q9BXS0 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL25A1Q9BXS0 MTCO1P24-201ENST00000515438 1558 ntBASIC6.01□□□□□ -1.45
COL25A1Q9BXS0 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
COL25A1Q9BXS0 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
COL25A1Q9BXS0 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL25A1Q9BXS0 SDAD1P2-201ENST00000441308 2028 ntBASIC6.01□□□□□ -1.45
COL25A1Q9BXS0 NPIPB6-201ENST00000532254 2016 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL25A1Q9BXS0 COG2-209ENST00000534989 2963 ntTSL 2 BASIC6.01□□□□□ -1.45
COL25A1Q9BXS0 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL25A1Q9BXS0 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL25A1Q9BXS0 NDUFS1-204ENST00000440274 2394 ntTSL 2 BASIC6.01□□□□□ -1.45
COL25A1Q9BXS0 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
COL25A1Q9BXS0 SPATA31C2-201ENST00000324915 3777 ntBASIC6.01□□□□□ -1.45
COL25A1Q9BXS0 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
COL25A1Q9BXS0 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
COL25A1Q9BXS0 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL25A1Q9BXS0 TPTE2P4-201ENST00000258589 1605 ntBASIC6.01□□□□□ -1.45
COL25A1Q9BXS0 RNA5SP131-201ENST00000365452 119 ntBASIC6.01□□□□□ -1.45
COL25A1Q9BXS0 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL25A1Q9BXS0 RNU6-1151P-201ENST00000384684 107 ntBASIC6.01□□□□□ -1.45
COL25A1Q9BXS0 DUTP5-201ENST00000406790 469 ntBASIC6.01□□□□□ -1.45
COL25A1Q9BXS0 RNU6-735P-201ENST00000410612 107 ntBASIC6.01□□□□□ -1.45
COL25A1Q9BXS0 RNU6-272P-201ENST00000411028 104 ntBASIC6.01□□□□□ -1.45
COL25A1Q9BXS0 AC119751.6-201ENST00000416712 186 ntBASIC6.01□□□□□ -1.45
COL25A1Q9BXS0 AC068533.1-201ENST00000418542 415 ntBASIC6.01□□□□□ -1.45
COL25A1Q9BXS0 AC012065.2-201ENST00000421295 375 ntBASIC6.01□□□□□ -1.45
COL25A1Q9BXS0 MYL8P-204ENST00000431574 518 ntBASIC6.01□□□□□ -1.45
COL25A1Q9BXS0 AC093156.1-201ENST00000440382 670 ntBASIC6.01□□□□□ -1.45
COL25A1Q9BXS0 AL162388.1-201ENST00000450912 352 ntBASIC6.01□□□□□ -1.45
COL25A1Q9BXS0 TRBVB-201ENST00000477100 408 ntBASIC6.01□□□□□ -1.45
COL25A1Q9BXS0 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC6.01□□□□□ -1.45
COL25A1Q9BXS0 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC6.01□□□□□ -1.45
COL25A1Q9BXS0 Y_RNA.683-201ENST00000516508 93 ntBASIC6.01□□□□□ -1.45
COL25A1Q9BXS0 RNA5SP384-201ENST00000516615 116 ntBASIC6.01□□□□□ -1.45
COL25A1Q9BXS0 TBCA-207ENST00000520039 157 ntTSL 3 BASIC6.01□□□□□ -1.45
COL25A1Q9BXS0 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC6.01□□□□□ -1.45
COL25A1Q9BXS0 AP000907.2-201ENST00000530827 353 ntBASIC6.01□□□□□ -1.45
COL25A1Q9BXS0 LSM3P2-201ENST00000551246 273 ntBASIC6.01□□□□□ -1.45
COL25A1Q9BXS0 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC6.01□□□□□ -1.45
COL25A1Q9BXS0 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC6.01□□□□□ -1.45
COL25A1Q9BXS0 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC6.01□□□□□ -1.45
COL25A1Q9BXS0 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC6.01□□□□□ -1.45
COL25A1Q9BXS0 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC6.01□□□□□ -1.45
COL25A1Q9BXS0 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC6.01□□□□□ -1.45
COL25A1Q9BXS0 AC015712.7-201ENST00000615211 635 ntBASIC6.01□□□□□ -1.45
COL25A1Q9BXS0 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC6.01□□□□□ -1.45
COL25A1Q9BXS0 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC6.01□□□□□ -1.45
COL25A1Q9BXS0 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL25A1Q9BXS0 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL25A1Q9BXS0 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
COL25A1Q9BXS0 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC6.01□□□□□ -1.45
COL25A1Q9BXS0 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
COL25A1Q9BXS0 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
COL25A1Q9BXS0 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL25A1Q9BXS0 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL25A1Q9BXS0 RBM11-201ENST00000400577 1934 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL25A1Q9BXS0 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
COL25A1Q9BXS0 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC6.01□□□□□ -1.45
COL25A1Q9BXS0 PTK2-240ENST00000522684 4955 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL25A1Q9BXS0 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL25A1Q9BXS0 PIAS1-201ENST00000249636 8115 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL25A1Q9BXS0 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL25A1Q9BXS0 AC104837.1-201ENST00000444644 1587 ntBASIC6.01□□□□□ -1.45
COL25A1Q9BXS0 AC092821.2-201ENST00000545710 2042 ntBASIC6.01□□□□□ -1.45
COL25A1Q9BXS0 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
COL25A1Q9BXS0 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.01□□□□□ -1.45
COL25A1Q9BXS0 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL25A1Q9BXS0 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
COL25A1Q9BXS0 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms