Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC6.17□□□□□ -1.42
USB1Q9BQ65 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC6.17□□□□□ -1.42
USB1Q9BQ65 OR1M4P-201ENST00000589199 287 ntBASIC6.17□□□□□ -1.42
USB1Q9BQ65 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC6.17□□□□□ -1.42
USB1Q9BQ65 AC111186.1-201ENST00000604684 130 ntBASIC6.17□□□□□ -1.42
USB1Q9BQ65 AC004832.4-201ENST00000608952 331 ntBASIC6.17□□□□□ -1.42
USB1Q9BQ65 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC6.17□□□□□ -1.42
USB1Q9BQ65 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC6.17□□□□□ -1.42
USB1Q9BQ65 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC6.17□□□□□ -1.42
USB1Q9BQ65 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
USB1Q9BQ65 GTF2IP4-201ENST00000453092 2054 ntBASIC6.17□□□□□ -1.42
USB1Q9BQ65 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
USB1Q9BQ65 AC008758.3-201ENST00000507003 1829 ntBASIC6.17□□□□□ -1.42
USB1Q9BQ65 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
USB1Q9BQ65 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
USB1Q9BQ65 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
USB1Q9BQ65 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
USB1Q9BQ65 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC6.17□□□□□ -1.42
USB1Q9BQ65 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
USB1Q9BQ65 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
USB1Q9BQ65 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
USB1Q9BQ65 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
USB1Q9BQ65 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.17□□□□□ -1.42
USB1Q9BQ65 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
USB1Q9BQ65 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
USB1Q9BQ65 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
USB1Q9BQ65 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
USB1Q9BQ65 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
USB1Q9BQ65 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
USB1Q9BQ65 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC6.16□□□□□ -1.42
USB1Q9BQ65 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
USB1Q9BQ65 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
USB1Q9BQ65 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC6.16□□□□□ -1.42
USB1Q9BQ65 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
USB1Q9BQ65 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
USB1Q9BQ65 LARS-212ENST00000510191 3737 ntTSL 2 BASIC6.16□□□□□ -1.42
USB1Q9BQ65 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
USB1Q9BQ65 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
USB1Q9BQ65 OR10D1P-201ENST00000355343 936 ntBASIC6.16□□□□□ -1.42
USB1Q9BQ65 RN7SKP184-201ENST00000362348 333 ntBASIC6.16□□□□□ -1.42
USB1Q9BQ65 Y_RNA.122-201ENST00000363331 96 ntBASIC6.16□□□□□ -1.42
USB1Q9BQ65 RNU6-708P-201ENST00000384217 107 ntBASIC6.16□□□□□ -1.42
USB1Q9BQ65 AL136100.1-201ENST00000407696 330 ntBASIC6.16□□□□□ -1.42
USB1Q9BQ65 RN7SKP188-201ENST00000410789 317 ntBASIC6.16□□□□□ -1.42
USB1Q9BQ65 EIF1P2-201ENST00000428233 350 ntBASIC6.16□□□□□ -1.42
USB1Q9BQ65 AC006946.1-201ENST00000429106 328 ntBASIC6.16□□□□□ -1.42
USB1Q9BQ65 CYCSP43-201ENST00000438233 310 ntBASIC6.16□□□□□ -1.42
USB1Q9BQ65 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC6.16□□□□□ -1.42
USB1Q9BQ65 AC011411.1-201ENST00000509592 876 ntBASIC6.16□□□□□ -1.42
USB1Q9BQ65 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC6.16□□□□□ -1.42
USB1Q9BQ65 RNU6-390P-201ENST00000516259 103 ntBASIC6.16□□□□□ -1.42
USB1Q9BQ65 Y_RNA.683-201ENST00000516508 93 ntBASIC6.16□□□□□ -1.42
USB1Q9BQ65 SCARNA11.1-201ENST00000516918 132 ntBASIC6.16□□□□□ -1.42
USB1Q9BQ65 RN7SKP60-201ENST00000516985 239 ntBASIC6.16□□□□□ -1.42
USB1Q9BQ65 AC011853.1-201ENST00000518911 454 ntBASIC6.16□□□□□ -1.42
USB1Q9BQ65 HIGD1AP5-201ENST00000529959 259 ntBASIC6.16□□□□□ -1.42
USB1Q9BQ65 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC6.16□□□□□ -1.42
USB1Q9BQ65 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC6.16□□□□□ -1.42
USB1Q9BQ65 AC068790.4-201ENST00000602474 263 ntBASIC6.16□□□□□ -1.42
USB1Q9BQ65 AC007619.2-201ENST00000605743 379 ntBASIC6.16□□□□□ -1.42
USB1Q9BQ65 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC6.16□□□□□ -1.42
USB1Q9BQ65 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
USB1Q9BQ65 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
USB1Q9BQ65 DLEU1_1.1-201ENST00000618107 190 ntBASIC6.16□□□□□ -1.42
USB1Q9BQ65 FP236240.3-201ENST00000623061 327 ntBASIC6.16□□□□□ -1.42
USB1Q9BQ65 AC008626.2-201ENST00000624425 248 ntBASIC6.16□□□□□ -1.42
USB1Q9BQ65 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC6.16□□□□□ -1.42
USB1Q9BQ65 ERVFRD-3-201ENST00000578561 1617 ntBASIC6.16□□□□□ -1.42
USB1Q9BQ65 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
USB1Q9BQ65 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.16□□□□□ -1.42
USB1Q9BQ65 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
USB1Q9BQ65 SELE-203ENST00000367775 3389 ntTSL 5 BASIC6.16□□□□□ -1.42
USB1Q9BQ65 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
USB1Q9BQ65 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
USB1Q9BQ65 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
USB1Q9BQ65 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
USB1Q9BQ65 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
USB1Q9BQ65 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
USB1Q9BQ65 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.15□□□□□ -1.42
USB1Q9BQ65 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
USB1Q9BQ65 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
USB1Q9BQ65 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
USB1Q9BQ65 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.42
USB1Q9BQ65 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
USB1Q9BQ65 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
USB1Q9BQ65 SNORD81.1-201ENST00000363064 77 ntBASIC6.15□□□□□ -1.42
USB1Q9BQ65 Y_RNA.199-201ENST00000364014 102 ntBASIC6.15□□□□□ -1.42
USB1Q9BQ65 MIR551B-201ENST00000384984 96 ntBASIC6.15□□□□□ -1.42
USB1Q9BQ65 U3.42-201ENST00000408746 214 ntBASIC6.15□□□□□ -1.42
USB1Q9BQ65 GSTA6P-201ENST00000424144 582 ntBASIC6.15□□□□□ -1.42
USB1Q9BQ65 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC6.15□□□□□ -1.42
USB1Q9BQ65 TRAPPC2P5-201ENST00000426293 308 ntBASIC6.15□□□□□ -1.42
USB1Q9BQ65 RPL3P11-201ENST00000434028 1146 ntBASIC6.15□□□□□ -1.42
USB1Q9BQ65 CYCSP12-201ENST00000437729 300 ntBASIC6.15□□□□□ -1.42
USB1Q9BQ65 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
USB1Q9BQ65 AC093815.1-201ENST00000508637 280 ntBASIC6.15□□□□□ -1.42
USB1Q9BQ65 RNU6-352P-201ENST00000516908 107 ntBASIC6.15□□□□□ -1.42
USB1Q9BQ65 IGLVV-66-201ENST00000523818 341 ntBASIC6.15□□□□□ -1.42
USB1Q9BQ65 EIF4A2P5-201ENST00000529914 499 ntBASIC6.15□□□□□ -1.42
USB1Q9BQ65 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 134.9 ms