Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.96□□□□□ -1.62
HPS3Q969F9 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HPS3Q969F9 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HPS3Q969F9 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
HPS3Q969F9 MAPK10-303ENST00000641324 3959 ntBASIC4.96□□□□□ -1.62
HPS3Q969F9 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
HPS3Q969F9 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HPS3Q969F9 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HPS3Q969F9 AC091046.3-201ENST00000631455 1574 ntBASIC4.95□□□□□ -1.62
HPS3Q969F9 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.95□□□□□ -1.62
HPS3Q969F9 AC087190.4-201ENST00000574616 8334 ntBASIC4.95□□□□□ -1.62
HPS3Q969F9 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC4.95□□□□□ -1.62
HPS3Q969F9 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
HPS3Q969F9 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
HPS3Q969F9 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HPS3Q969F9 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HPS3Q969F9 RPL23AP57-201ENST00000332361 466 ntBASIC4.95□□□□□ -1.62
HPS3Q969F9 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.95□□□□□ -1.62
HPS3Q969F9 RNU4-21P-201ENST00000362802 126 ntBASIC4.95□□□□□ -1.62
HPS3Q969F9 HSPD1P16-201ENST00000402302 394 ntBASIC4.95□□□□□ -1.62
HPS3Q969F9 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC4.95□□□□□ -1.62
HPS3Q969F9 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.95□□□□□ -1.62
HPS3Q969F9 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.95□□□□□ -1.62
HPS3Q969F9 AC004448.2-201ENST00000422360 586 ntBASIC4.95□□□□□ -1.62
HPS3Q969F9 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.95□□□□□ -1.62
HPS3Q969F9 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC4.95□□□□□ -1.62
HPS3Q969F9 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC4.95□□□□□ -1.62
HPS3Q969F9 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.95□□□□□ -1.62
HPS3Q969F9 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC4.95□□□□□ -1.62
HPS3Q969F9 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.95□□□□□ -1.62
HPS3Q969F9 BMI1P1-201ENST00000445879 941 ntBASIC4.95□□□□□ -1.62
HPS3Q969F9 ARL2BPP10-201ENST00000446487 531 ntBASIC4.95□□□□□ -1.62
HPS3Q969F9 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC4.95□□□□□ -1.62
HPS3Q969F9 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC4.95□□□□□ -1.62
HPS3Q969F9 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.95□□□□□ -1.62
HPS3Q969F9 USP9YP34-201ENST00000453983 808 ntBASIC4.95□□□□□ -1.62
HPS3Q969F9 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HPS3Q969F9 AL136126.1-201ENST00000473603 402 ntBASIC4.95□□□□□ -1.62
HPS3Q969F9 AC087385.1-201ENST00000475062 312 ntBASIC4.95□□□□□ -1.62
HPS3Q969F9 RPL23AP65-201ENST00000475608 468 ntBASIC4.95□□□□□ -1.62
HPS3Q969F9 AC017015.1-201ENST00000477387 286 ntBASIC4.95□□□□□ -1.62
HPS3Q969F9 IGKV1-32-201ENST00000519290 311 ntBASIC4.95□□□□□ -1.62
HPS3Q969F9 IGLVIV-53-201ENST00000520107 367 ntBASIC4.95□□□□□ -1.62
HPS3Q969F9 AC022861.1-201ENST00000522981 663 ntBASIC4.95□□□□□ -1.62
HPS3Q969F9 AP000873.5-201ENST00000533906 236 ntBASIC4.95□□□□□ -1.62
HPS3Q969F9 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.95□□□□□ -1.62
HPS3Q969F9 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.95□□□□□ -1.62
HPS3Q969F9 AC141257.3-201ENST00000572906 215 ntBASIC4.95□□□□□ -1.62
HPS3Q969F9 AC103987.3-201ENST00000582071 292 ntBASIC4.95□□□□□ -1.62
HPS3Q969F9 RPL7P50-201ENST00000600588 727 ntBASIC4.95□□□□□ -1.62
HPS3Q969F9 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.95□□□□□ -1.62
HPS3Q969F9 AL133243.1-201ENST00000614487 366 ntBASIC4.95□□□□□ -1.62
HPS3Q969F9 AC009318.4-201ENST00000620496 486 ntBASIC4.95□□□□□ -1.62
HPS3Q969F9 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
HPS3Q969F9 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
HPS3Q969F9 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.95□□□□□ -1.62
HPS3Q969F9 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HPS3Q969F9 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HPS3Q969F9 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
HPS3Q969F9 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HPS3Q969F9 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HPS3Q969F9 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
HPS3Q969F9 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
HPS3Q969F9 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
HPS3Q969F9 RNA5SP332-201ENST00000391063 115 ntBASIC4.94□□□□□ -1.62
HPS3Q969F9 RPS16P5-201ENST00000406501 404 ntBASIC4.94□□□□□ -1.62
HPS3Q969F9 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC4.94□□□□□ -1.62
HPS3Q969F9 TPMTP2-201ENST00000414372 726 ntBASIC4.94□□□□□ -1.62
HPS3Q969F9 AC119751.6-201ENST00000416712 186 ntBASIC4.94□□□□□ -1.62
HPS3Q969F9 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.94□□□□□ -1.62
HPS3Q969F9 UQCRBP1-201ENST00000421129 336 ntBASIC4.94□□□□□ -1.62
HPS3Q969F9 COX6CP17-201ENST00000421389 185 ntBASIC4.94□□□□□ -1.62
HPS3Q969F9 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC4.94□□□□□ -1.62
HPS3Q969F9 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.94□□□□□ -1.62
HPS3Q969F9 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC4.94□□□□□ -1.62
HPS3Q969F9 AL365184.2-201ENST00000431139 435 ntBASIC4.94□□□□□ -1.62
HPS3Q969F9 AL117351.1-201ENST00000438864 766 ntBASIC4.94□□□□□ -1.62
HPS3Q969F9 UBE2V1P3-201ENST00000439651 417 ntBASIC4.94□□□□□ -1.62
HPS3Q969F9 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.94□□□□□ -1.62
HPS3Q969F9 TPT1P12-201ENST00000448968 492 ntBASIC4.94□□□□□ -1.62
HPS3Q969F9 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.94□□□□□ -1.62
HPS3Q969F9 VN1R32P-201ENST00000452234 905 ntBASIC4.94□□□□□ -1.62
HPS3Q969F9 AL513533.1-201ENST00000453728 415 ntBASIC4.94□□□□□ -1.62
HPS3Q969F9 NDUFA12P1-201ENST00000455914 406 ntBASIC4.94□□□□□ -1.62
HPS3Q969F9 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.94□□□□□ -1.62
HPS3Q969F9 RN7SL817P-201ENST00000480777 288 ntBASIC4.94□□□□□ -1.62
HPS3Q969F9 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.94□□□□□ -1.62
HPS3Q969F9 POU5F1P7-201ENST00000508759 541 ntBASIC4.94□□□□□ -1.62
HPS3Q969F9 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.94□□□□□ -1.62
HPS3Q969F9 MTND3P5-201ENST00000512798 333 ntBASIC4.94□□□□□ -1.62
HPS3Q969F9 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.94□□□□□ -1.62
HPS3Q969F9 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.94□□□□□ -1.62
HPS3Q969F9 RFPL1S-203ENST00000539579 330 ntBASIC4.94□□□□□ -1.62
HPS3Q969F9 GTF2IP22-201ENST00000554443 182 ntBASIC4.94□□□□□ -1.62
HPS3Q969F9 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC4.94□□□□□ -1.62
HPS3Q969F9 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.94□□□□□ -1.62
HPS3Q969F9 AC090582.1-201ENST00000636321 199 ntBASIC4.94□□□□□ -1.62
HPS3Q969F9 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.94□□□□□ -1.62
HPS3Q969F9 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HPS3Q969F9 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms