Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.08□□□□□ -1.6
NUP43Q8NFH3 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC5.08□□□□□ -1.6
NUP43Q8NFH3 ELOCP31-201ENST00000540463 467 ntBASIC5.08□□□□□ -1.6
NUP43Q8NFH3 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC5.08□□□□□ -1.6
NUP43Q8NFH3 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.08□□□□□ -1.6
NUP43Q8NFH3 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
NUP43Q8NFH3 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.08□□□□□ -1.6
NUP43Q8NFH3 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC5.08□□□□□ -1.6
NUP43Q8NFH3 MIR4675-201ENST00000577898 77 ntBASIC5.08□□□□□ -1.6
NUP43Q8NFH3 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.08□□□□□ -1.6
NUP43Q8NFH3 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.08□□□□□ -1.6
NUP43Q8NFH3 AC006504.6-201ENST00000590142 199 ntBASIC5.08□□□□□ -1.6
NUP43Q8NFH3 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.08□□□□□ -1.6
NUP43Q8NFH3 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC5.08□□□□□ -1.6
NUP43Q8NFH3 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.08□□□□□ -1.6
NUP43Q8NFH3 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NUP43Q8NFH3 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.08□□□□□ -1.6
NUP43Q8NFH3 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.08□□□□□ -1.6
NUP43Q8NFH3 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.08□□□□□ -1.6
NUP43Q8NFH3 OR2L1P-202ENST00000641567 1023 ntBASIC5.08□□□□□ -1.6
NUP43Q8NFH3 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NUP43Q8NFH3 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NUP43Q8NFH3 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NUP43Q8NFH3 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NUP43Q8NFH3 AP001029.2-203ENST00000589795 4910 ntBASIC5.08□□□□□ -1.6
NUP43Q8NFH3 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NUP43Q8NFH3 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
NUP43Q8NFH3 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NUP43Q8NFH3 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NUP43Q8NFH3 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.07□□□□□ -1.6
NUP43Q8NFH3 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NUP43Q8NFH3 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NUP43Q8NFH3 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.07□□□□□ -1.6
NUP43Q8NFH3 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.07□□□□□ -1.6
NUP43Q8NFH3 AL118496.1-201ENST00000440201 1812 ntBASIC5.07□□□□□ -1.6
NUP43Q8NFH3 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.07□□□□□ -1.6
NUP43Q8NFH3 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
NUP43Q8NFH3 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NUP43Q8NFH3 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
NUP43Q8NFH3 Y_RNA.128-201ENST00000363391 112 ntBASIC5.07□□□□□ -1.6
NUP43Q8NFH3 Y_RNA.216-201ENST00000364205 93 ntBASIC5.07□□□□□ -1.6
NUP43Q8NFH3 SNORA4.3-201ENST00000365564 137 ntBASIC5.07□□□□□ -1.6
NUP43Q8NFH3 RNU6-474P-201ENST00000384243 107 ntBASIC5.07□□□□□ -1.6
NUP43Q8NFH3 SNORA16A-201ENST00000384342 137 ntBASIC5.07□□□□□ -1.6
NUP43Q8NFH3 RNU6-1160P-201ENST00000384546 104 ntBASIC5.07□□□□□ -1.6
NUP43Q8NFH3 RNU6-606P-201ENST00000384721 111 ntBASIC5.07□□□□□ -1.6
NUP43Q8NFH3 Y_RNA.579-201ENST00000390939 94 ntBASIC5.07□□□□□ -1.6
NUP43Q8NFH3 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
NUP43Q8NFH3 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NUP43Q8NFH3 AL356421.1-201ENST00000403255 413 ntBASIC5.07□□□□□ -1.6
NUP43Q8NFH3 RPL12P17-201ENST00000432393 498 ntBASIC5.07□□□□□ -1.6
NUP43Q8NFH3 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NUP43Q8NFH3 AC012075.1-201ENST00000436549 580 ntBASIC5.07□□□□□ -1.6
NUP43Q8NFH3 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.07□□□□□ -1.6
NUP43Q8NFH3 DDX3P2-201ENST00000446138 111 ntBASIC5.07□□□□□ -1.6
NUP43Q8NFH3 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC5.07□□□□□ -1.6
NUP43Q8NFH3 AC073415.1-201ENST00000449240 153 ntBASIC5.07□□□□□ -1.6
NUP43Q8NFH3 YWHAEP1-201ENST00000453697 763 ntBASIC5.07□□□□□ -1.6
NUP43Q8NFH3 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
NUP43Q8NFH3 TRBV26-201ENST00000456572 344 ntBASIC5.07□□□□□ -1.6
NUP43Q8NFH3 AC092754.1-201ENST00000472975 479 ntBASIC5.07□□□□□ -1.6
NUP43Q8NFH3 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.07□□□□□ -1.6
NUP43Q8NFH3 AL163973.1-201ENST00000484753 577 ntBASIC5.07□□□□□ -1.6
NUP43Q8NFH3 AC093267.1-201ENST00000489176 961 ntBASIC5.07□□□□□ -1.6
NUP43Q8NFH3 AP001284.1-201ENST00000528393 2118 ntBASIC5.07□□□□□ -1.6
NUP43Q8NFH3 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NUP43Q8NFH3 ARL6IP1P1-201ENST00000545836 610 ntBASIC5.07□□□□□ -1.6
NUP43Q8NFH3 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC5.07□□□□□ -1.6
NUP43Q8NFH3 LSM6P2-201ENST00000552208 177 ntBASIC5.07□□□□□ -1.6
NUP43Q8NFH3 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC5.07□□□□□ -1.6
NUP43Q8NFH3 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.07□□□□□ -1.6
NUP43Q8NFH3 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC5.07□□□□□ -1.6
NUP43Q8NFH3 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.07□□□□□ -1.6
NUP43Q8NFH3 AC087763.1-201ENST00000603391 286 ntBASIC5.07□□□□□ -1.6
NUP43Q8NFH3 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC5.07□□□□□ -1.6
NUP43Q8NFH3 AC127024.6-201ENST00000621598 424 ntBASIC5.07□□□□□ -1.6
NUP43Q8NFH3 AC079597.1-201ENST00000624306 508 ntBASIC5.07□□□□□ -1.6
NUP43Q8NFH3 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC5.07□□□□□ -1.6
NUP43Q8NFH3 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.07□□□□□ -1.6
NUP43Q8NFH3 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NUP43Q8NFH3 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
NUP43Q8NFH3 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
NUP43Q8NFH3 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
NUP43Q8NFH3 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
NUP43Q8NFH3 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.06□□□□□ -1.6
NUP43Q8NFH3 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC5.06□□□□□ -1.6
NUP43Q8NFH3 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5.06□□□□□ -1.6
NUP43Q8NFH3 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.06□□□□□ -1.6
NUP43Q8NFH3 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
NUP43Q8NFH3 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
NUP43Q8NFH3 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
NUP43Q8NFH3 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.06□□□□□ -1.6
NUP43Q8NFH3 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
NUP43Q8NFH3 RNU6-43P-201ENST00000384302 107 ntBASIC5.06□□□□□ -1.6
NUP43Q8NFH3 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
NUP43Q8NFH3 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.06□□□□□ -1.6
NUP43Q8NFH3 SPRYD7P1-201ENST00000443861 570 ntBASIC5.06□□□□□ -1.6
NUP43Q8NFH3 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.06□□□□□ -1.6
NUP43Q8NFH3 AC006480.1-201ENST00000449887 378 ntBASIC5.06□□□□□ -1.6
NUP43Q8NFH3 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 144.4 ms