Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CPEB3Q8NE35 Y_RNA.535-201ENST00000384612 99 ntBASIC4.51□□□□□ -1.69
CPEB3Q8NE35 MT-TD-201ENST00000387419 68 ntBASIC4.51□□□□□ -1.69
CPEB3Q8NE35 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.51□□□□□ -1.69
CPEB3Q8NE35 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.51□□□□□ -1.69
CPEB3Q8NE35 JKAMPP1-201ENST00000413804 919 ntBASIC4.51□□□□□ -1.69
CPEB3Q8NE35 TPMTP2-201ENST00000414372 726 ntBASIC4.51□□□□□ -1.69
CPEB3Q8NE35 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC4.51□□□□□ -1.69
CPEB3Q8NE35 RPL37P1-201ENST00000432310 284 ntBASIC4.51□□□□□ -1.69
CPEB3Q8NE35 RPS3AP54-201ENST00000435535 734 ntBASIC4.51□□□□□ -1.69
CPEB3Q8NE35 YWHAZP8-201ENST00000436935 731 ntBASIC4.51□□□□□ -1.69
CPEB3Q8NE35 RPL22P17-201ENST00000438729 315 ntBASIC4.51□□□□□ -1.69
CPEB3Q8NE35 BX842559.2-201ENST00000451418 605 ntBASIC4.51□□□□□ -1.69
CPEB3Q8NE35 AC243772.1-201ENST00000451620 410 ntBASIC4.51□□□□□ -1.69
CPEB3Q8NE35 MTCO3P2-201ENST00000457365 171 ntBASIC4.51□□□□□ -1.69
CPEB3Q8NE35 PMCHL2-203ENST00000457791 237 ntBASIC4.51□□□□□ -1.69
CPEB3Q8NE35 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CPEB3Q8NE35 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.51□□□□□ -1.69
CPEB3Q8NE35 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC4.51□□□□□ -1.69
CPEB3Q8NE35 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
CPEB3Q8NE35 Y_RNA.672-201ENST00000516289 104 ntBASIC4.51□□□□□ -1.69
CPEB3Q8NE35 HMGB1P19-201ENST00000517578 577 ntBASIC4.51□□□□□ -1.69
CPEB3Q8NE35 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC4.51□□□□□ -1.69
CPEB3Q8NE35 SOD1P3-201ENST00000518682 454 ntBASIC4.51□□□□□ -1.69
CPEB3Q8NE35 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.51□□□□□ -1.69
CPEB3Q8NE35 COX6CP8-201ENST00000522620 226 ntBASIC4.51□□□□□ -1.69
CPEB3Q8NE35 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.51□□□□□ -1.69
CPEB3Q8NE35 CYCSP28-201ENST00000534284 321 ntBASIC4.51□□□□□ -1.69
CPEB3Q8NE35 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.51□□□□□ -1.69
CPEB3Q8NE35 AC123904.3-201ENST00000547218 814 ntBASIC4.51□□□□□ -1.69
CPEB3Q8NE35 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.51□□□□□ -1.69
CPEB3Q8NE35 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.51□□□□□ -1.69
CPEB3Q8NE35 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC4.51□□□□□ -1.69
CPEB3Q8NE35 AC090312.1-201ENST00000580637 348 ntBASIC4.51□□□□□ -1.69
CPEB3Q8NE35 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.51□□□□□ -1.69
CPEB3Q8NE35 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.51□□□□□ -1.69
CPEB3Q8NE35 AC005261.5-201ENST00000596280 355 ntBASIC4.51□□□□□ -1.69
CPEB3Q8NE35 AL009028.1-201ENST00000604895 802 ntBASIC4.51□□□□□ -1.69
CPEB3Q8NE35 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.51□□□□□ -1.69
CPEB3Q8NE35 AC019193.2-201ENST00000610012 634 ntBASIC4.51□□□□□ -1.69
CPEB3Q8NE35 AL136295.6-201ENST00000610486 658 ntBASIC4.51□□□□□ -1.69
CPEB3Q8NE35 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC4.51□□□□□ -1.69
CPEB3Q8NE35 AC139792.3-201ENST00000623525 224 ntBASIC4.51□□□□□ -1.69
CPEB3Q8NE35 CR392039.4-201ENST00000624968 501 ntBASIC4.51□□□□□ -1.69
CPEB3Q8NE35 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.51□□□□□ -1.69
CPEB3Q8NE35 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.51□□□□□ -1.69
CPEB3Q8NE35 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CPEB3Q8NE35 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CPEB3Q8NE35 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CPEB3Q8NE35 AC097504.1-201ENST00000515103 2415 ntBASIC4.51□□□□□ -1.69
CPEB3Q8NE35 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.51□□□□□ -1.69
CPEB3Q8NE35 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CPEB3Q8NE35 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.5□□□□□ -1.69
CPEB3Q8NE35 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CPEB3Q8NE35 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
CPEB3Q8NE35 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CPEB3Q8NE35 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CPEB3Q8NE35 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
CPEB3Q8NE35 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CPEB3Q8NE35 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
CPEB3Q8NE35 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
CPEB3Q8NE35 MAPK10-263ENST00000641052 4307 ntBASIC4.5□□□□□ -1.69
CPEB3Q8NE35 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.5□□□□□ -1.69
CPEB3Q8NE35 Y_RNA.279-201ENST00000364763 95 ntBASIC4.5□□□□□ -1.69
CPEB3Q8NE35 RNU6-282P-201ENST00000365357 103 ntBASIC4.5□□□□□ -1.69
CPEB3Q8NE35 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
CPEB3Q8NE35 MIR105-2-201ENST00000385083 81 ntBASIC4.5□□□□□ -1.69
CPEB3Q8NE35 RPL7P25-201ENST00000404151 721 ntBASIC4.5□□□□□ -1.69
CPEB3Q8NE35 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC4.5□□□□□ -1.69
CPEB3Q8NE35 ZNF90P2-204ENST00000419323 1075 ntBASIC4.5□□□□□ -1.69
CPEB3Q8NE35 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.5□□□□□ -1.69
CPEB3Q8NE35 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
CPEB3Q8NE35 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.5□□□□□ -1.69
CPEB3Q8NE35 AC133104.1-201ENST00000429100 218 ntBASIC4.5□□□□□ -1.69
CPEB3Q8NE35 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC4.5□□□□□ -1.69
CPEB3Q8NE35 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.5□□□□□ -1.69
CPEB3Q8NE35 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.5□□□□□ -1.69
CPEB3Q8NE35 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.5□□□□□ -1.69
CPEB3Q8NE35 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.5□□□□□ -1.69
CPEB3Q8NE35 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC4.5□□□□□ -1.69
CPEB3Q8NE35 PRPF38AP1-201ENST00000451976 933 ntBASIC4.5□□□□□ -1.69
CPEB3Q8NE35 FAM172BP-201ENST00000487497 1089 ntBASIC4.5□□□□□ -1.69
CPEB3Q8NE35 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.5□□□□□ -1.69
CPEB3Q8NE35 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC4.5□□□□□ -1.69
CPEB3Q8NE35 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC4.5□□□□□ -1.69
CPEB3Q8NE35 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.5□□□□□ -1.69
CPEB3Q8NE35 OR8L1P-201ENST00000534005 955 ntBASIC4.5□□□□□ -1.69
CPEB3Q8NE35 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.5□□□□□ -1.69
CPEB3Q8NE35 CBX3P5-201ENST00000552017 521 ntBASIC4.5□□□□□ -1.69
CPEB3Q8NE35 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC4.5□□□□□ -1.69
CPEB3Q8NE35 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC4.5□□□□□ -1.69
CPEB3Q8NE35 AC011840.5-201ENST00000582125 771 ntBASIC4.5□□□□□ -1.69
CPEB3Q8NE35 PRPF19P1-201ENST00000584766 898 ntBASIC4.5□□□□□ -1.69
CPEB3Q8NE35 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.5□□□□□ -1.69
CPEB3Q8NE35 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.5□□□□□ -1.69
CPEB3Q8NE35 AC044792.1-201ENST00000593294 196 ntBASIC4.5□□□□□ -1.69
CPEB3Q8NE35 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.5□□□□□ -1.69
CPEB3Q8NE35 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.5□□□□□ -1.69
CPEB3Q8NE35 AC090948.2-201ENST00000607363 564 ntBASIC4.5□□□□□ -1.69
CPEB3Q8NE35 AC007497.1-201ENST00000610421 561 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 169 ms