Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC6.22□□□□□ -1.41
NPAS3Q8IXF0 HMGN2P36-201ENST00000529541 409 ntBASIC6.22□□□□□ -1.41
NPAS3Q8IXF0 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC6.22□□□□□ -1.41
NPAS3Q8IXF0 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC6.22□□□□□ -1.41
NPAS3Q8IXF0 AC004024.1-201ENST00000549244 247 ntBASIC6.22□□□□□ -1.41
NPAS3Q8IXF0 AC090517.1-201ENST00000569307 266 ntBASIC6.22□□□□□ -1.41
NPAS3Q8IXF0 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC6.22□□□□□ -1.41
NPAS3Q8IXF0 MIR5188-201ENST00000583467 113 ntBASIC6.22□□□□□ -1.41
NPAS3Q8IXF0 AL031320.1-201ENST00000604177 357 ntBASIC6.22□□□□□ -1.41
NPAS3Q8IXF0 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC6.22□□□□□ -1.41
NPAS3Q8IXF0 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC6.22□□□□□ -1.41
NPAS3Q8IXF0 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
NPAS3Q8IXF0 PARP4P2-201ENST00000446672 3326 ntBASIC6.22□□□□□ -1.41
NPAS3Q8IXF0 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
NPAS3Q8IXF0 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.22□□□□□ -1.41
NPAS3Q8IXF0 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
NPAS3Q8IXF0 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.22□□□□□ -1.41
NPAS3Q8IXF0 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
NPAS3Q8IXF0 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.22□□□□□ -1.41
NPAS3Q8IXF0 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
NPAS3Q8IXF0 AC123769.1-201ENST00000530992 3192 ntBASIC6.22□□□□□ -1.41
NPAS3Q8IXF0 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
NPAS3Q8IXF0 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
NPAS3Q8IXF0 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.22□□□□□ -1.41
NPAS3Q8IXF0 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
NPAS3Q8IXF0 AC007114.2-201ENST00000576014 4281 ntBASIC6.22□□□□□ -1.41
NPAS3Q8IXF0 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
NPAS3Q8IXF0 AC105749.1-201ENST00000631338 2008 ntBASIC6.21□□□□□ -1.41
NPAS3Q8IXF0 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.41
NPAS3Q8IXF0 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.21□□□□□ -1.41
NPAS3Q8IXF0 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.21□□□□□ -1.41
NPAS3Q8IXF0 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
NPAS3Q8IXF0 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.41
NPAS3Q8IXF0 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
NPAS3Q8IXF0 RNA5SP46-201ENST00000362370 120 ntBASIC6.21□□□□□ -1.42
NPAS3Q8IXF0 RNU6-858P-201ENST00000362436 107 ntBASIC6.21□□□□□ -1.42
NPAS3Q8IXF0 RN7SKP162-201ENST00000363605 345 ntBASIC6.21□□□□□ -1.42
NPAS3Q8IXF0 RNU6-682P-201ENST00000363843 106 ntBASIC6.21□□□□□ -1.42
NPAS3Q8IXF0 RNA5SP394-201ENST00000364216 119 ntBASIC6.21□□□□□ -1.42
NPAS3Q8IXF0 Y_RNA.277-201ENST00000364754 102 ntBASIC6.21□□□□□ -1.42
NPAS3Q8IXF0 RNY1P5-201ENST00000383890 115 ntBASIC6.21□□□□□ -1.42
NPAS3Q8IXF0 RNU1-149P-201ENST00000390870 161 ntBASIC6.21□□□□□ -1.42
NPAS3Q8IXF0 MIR450B-201ENST00000401182 78 ntBASIC6.21□□□□□ -1.42
NPAS3Q8IXF0 AP000580.1-201ENST00000404439 358 ntBASIC6.21□□□□□ -1.42
NPAS3Q8IXF0 AL603910.2-201ENST00000407268 136 ntBASIC6.21□□□□□ -1.42
NPAS3Q8IXF0 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC6.21□□□□□ -1.42
NPAS3Q8IXF0 USMG5P1-201ENST00000425964 177 ntBASIC6.21□□□□□ -1.42
NPAS3Q8IXF0 RPL23AP22-201ENST00000437556 453 ntBASIC6.21□□□□□ -1.42
NPAS3Q8IXF0 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.21□□□□□ -1.42
NPAS3Q8IXF0 AC073909.1-201ENST00000447112 999 ntBASIC6.21□□□□□ -1.42
NPAS3Q8IXF0 CHEK2P4-201ENST00000450340 246 ntBASIC6.21□□□□□ -1.42
NPAS3Q8IXF0 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC6.21□□□□□ -1.42
NPAS3Q8IXF0 RPS27AP3-201ENST00000453803 454 ntBASIC6.21□□□□□ -1.42
NPAS3Q8IXF0 AC011225.1-201ENST00000457751 369 ntBASIC6.21□□□□□ -1.42
NPAS3Q8IXF0 MRPL42P6-201ENST00000486397 371 ntBASIC6.21□□□□□ -1.42
NPAS3Q8IXF0 RPS27P23-201ENST00000487608 251 ntBASIC6.21□□□□□ -1.42
NPAS3Q8IXF0 AC138866.2-201ENST00000508650 584 ntBASIC6.21□□□□□ -1.42
NPAS3Q8IXF0 RNU7-200P-201ENST00000516105 62 ntBASIC6.21□□□□□ -1.42
NPAS3Q8IXF0 RNU6-1004P-201ENST00000516584 111 ntBASIC6.21□□□□□ -1.42
NPAS3Q8IXF0 RN7SKP82-201ENST00000516786 223 ntBASIC6.21□□□□□ -1.42
NPAS3Q8IXF0 SNORA31.18-201ENST00000517043 134 ntBASIC6.21□□□□□ -1.42
NPAS3Q8IXF0 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC6.21□□□□□ -1.42
NPAS3Q8IXF0 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC6.21□□□□□ -1.42
NPAS3Q8IXF0 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC6.21□□□□□ -1.42
NPAS3Q8IXF0 MIR4505-201ENST00000582238 73 ntBASIC6.21□□□□□ -1.42
NPAS3Q8IXF0 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC6.21□□□□□ -1.42
NPAS3Q8IXF0 FO393422.1-201ENST00000603908 708 ntBASIC6.21□□□□□ -1.42
NPAS3Q8IXF0 MIR6719-201ENST00000622428 87 ntBASIC6.21□□□□□ -1.42
NPAS3Q8IXF0 AC130454.1-201ENST00000622948 401 ntBASIC6.21□□□□□ -1.42
NPAS3Q8IXF0 AL445363.3-201ENST00000623080 671 ntBASIC6.21□□□□□ -1.42
NPAS3Q8IXF0 AL691477.1-201ENST00000624398 162 ntBASIC6.21□□□□□ -1.42
NPAS3Q8IXF0 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
NPAS3Q8IXF0 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
NPAS3Q8IXF0 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
NPAS3Q8IXF0 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
NPAS3Q8IXF0 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.21□□□□□ -1.42
NPAS3Q8IXF0 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
NPAS3Q8IXF0 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.21□□□□□ -1.42
NPAS3Q8IXF0 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC6.21□□□□□ -1.42
NPAS3Q8IXF0 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
NPAS3Q8IXF0 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
NPAS3Q8IXF0 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
NPAS3Q8IXF0 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
NPAS3Q8IXF0 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.21□□□□□ -1.42
NPAS3Q8IXF0 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
NPAS3Q8IXF0 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.21□□□□□ -1.42
NPAS3Q8IXF0 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.2□□□□□ -1.42
NPAS3Q8IXF0 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
NPAS3Q8IXF0 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC6.2□□□□□ -1.42
NPAS3Q8IXF0 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.2□□□□□ -1.42
NPAS3Q8IXF0 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
NPAS3Q8IXF0 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
NPAS3Q8IXF0 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
NPAS3Q8IXF0 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
NPAS3Q8IXF0 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC6.2□□□□□ -1.42
NPAS3Q8IXF0 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
NPAS3Q8IXF0 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
NPAS3Q8IXF0 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
NPAS3Q8IXF0 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
NPAS3Q8IXF0 IGKV7-3-201ENST00000357453 298 ntBASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms