Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.38□□□□□ -1.39
RNF135Q8IUD6 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.38□□□□□ -1.39
RNF135Q8IUD6 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
RNF135Q8IUD6 RNU6-1252P-201ENST00000363054 104 ntBASIC6.38□□□□□ -1.39
RNF135Q8IUD6 RNU6-179P-201ENST00000363350 107 ntBASIC6.38□□□□□ -1.39
RNF135Q8IUD6 AL121834.1-202ENST00000404494 277 ntBASIC6.38□□□□□ -1.39
RNF135Q8IUD6 RNU2-50P-201ENST00000410494 143 ntBASIC6.38□□□□□ -1.39
RNF135Q8IUD6 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.38□□□□□ -1.39
RNF135Q8IUD6 UBE2V1P14-201ENST00000415815 558 ntBASIC6.38□□□□□ -1.39
RNF135Q8IUD6 TEX41-206ENST00000432608 661 ntTSL 3 BASIC6.38□□□□□ -1.39
RNF135Q8IUD6 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC6.38□□□□□ -1.39
RNF135Q8IUD6 RPL23AP43-201ENST00000446445 471 ntBASIC6.38□□□□□ -1.39
RNF135Q8IUD6 RPL30P15-201ENST00000457129 321 ntBASIC6.38□□□□□ -1.39
RNF135Q8IUD6 AC079168.1-201ENST00000458741 345 ntBASIC6.38□□□□□ -1.39
RNF135Q8IUD6 SNORD121B-201ENST00000458838 81 ntBASIC6.38□□□□□ -1.39
RNF135Q8IUD6 RNU7-59P-201ENST00000459101 61 ntBASIC6.38□□□□□ -1.39
RNF135Q8IUD6 snoU13.7-201ENST00000459220 104 ntBASIC6.38□□□□□ -1.39
RNF135Q8IUD6 AC006499.3-201ENST00000506077 748 ntBASIC6.38□□□□□ -1.39
RNF135Q8IUD6 RN7SKP40-201ENST00000517211 242 ntBASIC6.38□□□□□ -1.39
RNF135Q8IUD6 RNA5SP454-201ENST00000517231 127 ntBASIC6.38□□□□□ -1.39
RNF135Q8IUD6 CDH12P4-201ENST00000517835 295 ntBASIC6.38□□□□□ -1.39
RNF135Q8IUD6 CDH12P3-201ENST00000517935 295 ntBASIC6.38□□□□□ -1.39
RNF135Q8IUD6 CDH12P1-201ENST00000518435 295 ntBASIC6.38□□□□□ -1.39
RNF135Q8IUD6 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC6.38□□□□□ -1.39
RNF135Q8IUD6 PTP4A1P6-201ENST00000531034 478 ntBASIC6.38□□□□□ -1.39
RNF135Q8IUD6 AP001858.2-201ENST00000536213 601 ntBASIC6.38□□□□□ -1.39
RNF135Q8IUD6 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC6.38□□□□□ -1.39
RNF135Q8IUD6 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC6.38□□□□□ -1.39
RNF135Q8IUD6 RPL12P48-201ENST00000605620 304 ntBASIC6.38□□□□□ -1.39
RNF135Q8IUD6 MIR7159-201ENST00000620587 66 ntBASIC6.38□□□□□ -1.39
RNF135Q8IUD6 AC011155.2-201ENST00000623202 216 ntBASIC6.38□□□□□ -1.39
RNF135Q8IUD6 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC6.38□□□□□ -1.39
RNF135Q8IUD6 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
RNF135Q8IUD6 AC011369.2-201ENST00000624423 1567 ntBASIC6.38□□□□□ -1.39
RNF135Q8IUD6 ALB-209ENST00000503124 1741 ntTSL 5 BASIC6.38□□□□□ -1.39
RNF135Q8IUD6 MTND5P19-201ENST00000424872 1794 ntBASIC6.38□□□□□ -1.39
RNF135Q8IUD6 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC6.38□□□□□ -1.39
RNF135Q8IUD6 AL442639.1-201ENST00000625030 1899 ntBASIC6.38□□□□□ -1.39
RNF135Q8IUD6 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RNF135Q8IUD6 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC6.38□□□□□ -1.39
RNF135Q8IUD6 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RNF135Q8IUD6 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RNF135Q8IUD6 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
RNF135Q8IUD6 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.37□□□□□ -1.39
RNF135Q8IUD6 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RNF135Q8IUD6 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RNF135Q8IUD6 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RNF135Q8IUD6 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
RNF135Q8IUD6 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
RNF135Q8IUD6 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RNF135Q8IUD6 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
RNF135Q8IUD6 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.37□□□□□ -1.39
RNF135Q8IUD6 Y_RNA.148-201ENST00000363557 117 ntBASIC6.37□□□□□ -1.39
RNF135Q8IUD6 RNU6-379P-201ENST00000363813 104 ntBASIC6.37□□□□□ -1.39
RNF135Q8IUD6 RNU6-209P-201ENST00000384118 107 ntBASIC6.37□□□□□ -1.39
RNF135Q8IUD6 AP003170.5-201ENST00000397185 335 ntBASIC6.37□□□□□ -1.39
RNF135Q8IUD6 AL359643.1-201ENST00000404109 423 ntBASIC6.37□□□□□ -1.39
RNF135Q8IUD6 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC6.37□□□□□ -1.39
RNF135Q8IUD6 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
RNF135Q8IUD6 AL590609.2-201ENST00000421430 368 ntBASIC6.37□□□□□ -1.39
RNF135Q8IUD6 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC6.37□□□□□ -1.39
RNF135Q8IUD6 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.37□□□□□ -1.39
RNF135Q8IUD6 CFL1P1-202ENST00000432948 411 ntBASIC6.37□□□□□ -1.39
RNF135Q8IUD6 AC005019.1-201ENST00000436455 431 ntBASIC6.37□□□□□ -1.39
RNF135Q8IUD6 AF228730.2-201ENST00000438784 848 ntBASIC6.37□□□□□ -1.39
RNF135Q8IUD6 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC6.37□□□□□ -1.39
RNF135Q8IUD6 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC6.37□□□□□ -1.39
RNF135Q8IUD6 AC020550.1-201ENST00000447385 163 ntBASIC6.37□□□□□ -1.39
RNF135Q8IUD6 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC6.37□□□□□ -1.39
RNF135Q8IUD6 AC011225.1-201ENST00000457751 369 ntBASIC6.37□□□□□ -1.39
RNF135Q8IUD6 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC6.37□□□□□ -1.39
RNF135Q8IUD6 TRBVA-201ENST00000498804 316 ntBASIC6.37□□□□□ -1.39
RNF135Q8IUD6 HMGN1P9-201ENST00000515212 298 ntBASIC6.37□□□□□ -1.39
RNF135Q8IUD6 RN7SKP295-201ENST00000517264 153 ntBASIC6.37□□□□□ -1.39
RNF135Q8IUD6 AC009902.1-201ENST00000519351 183 ntBASIC6.37□□□□□ -1.39
RNF135Q8IUD6 AL137161.1-201ENST00000532231 390 ntBASIC6.37□□□□□ -1.39
RNF135Q8IUD6 OR10G5P-201ENST00000532733 358 ntBASIC6.37□□□□□ -1.39
RNF135Q8IUD6 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC6.37□□□□□ -1.39
RNF135Q8IUD6 MIR5583-1-201ENST00000580941 59 ntBASIC6.37□□□□□ -1.39
RNF135Q8IUD6 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC6.37□□□□□ -1.39
RNF135Q8IUD6 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC6.37□□□□□ -1.39
RNF135Q8IUD6 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.37□□□□□ -1.39
RNF135Q8IUD6 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.37□□□□□ -1.39
RNF135Q8IUD6 Z82243.1-201ENST00000609432 473 ntBASIC6.37□□□□□ -1.39
RNF135Q8IUD6 AL590099.1-201ENST00000615276 138 ntBASIC6.37□□□□□ -1.39
RNF135Q8IUD6 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
RNF135Q8IUD6 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC6.37□□□□□ -1.39
RNF135Q8IUD6 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RNF135Q8IUD6 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
RNF135Q8IUD6 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
RNF135Q8IUD6 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RNF135Q8IUD6 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RNF135Q8IUD6 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC6.37□□□□□ -1.39
RNF135Q8IUD6 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RNF135Q8IUD6 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RNF135Q8IUD6 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RNF135Q8IUD6 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
RNF135Q8IUD6 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
RNF135Q8IUD6 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
RNF135Q8IUD6 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms