Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.21□□□□□ -1.9
RTL4Q6ZR62 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.21□□□□□ -1.9
RTL4Q6ZR62 SNORA70.19-201ENST00000516717 90 ntBASIC3.21□□□□□ -1.9
RTL4Q6ZR62 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.21□□□□□ -1.9
RTL4Q6ZR62 POLR2KP1-201ENST00000553226 168 ntBASIC3.21□□□□□ -1.9
RTL4Q6ZR62 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3.21□□□□□ -1.9
RTL4Q6ZR62 MIR5186-201ENST00000577504 120 ntBASIC3.21□□□□□ -1.9
RTL4Q6ZR62 AP000919.1-202ENST00000581139 1264 ntBASIC3.21□□□□□ -1.9
RTL4Q6ZR62 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC3.21□□□□□ -1.9
RTL4Q6ZR62 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC3.21□□□□□ -1.9
RTL4Q6ZR62 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.21□□□□□ -1.9
RTL4Q6ZR62 AC006557.5-201ENST00000603126 811 ntBASIC3.21□□□□□ -1.9
RTL4Q6ZR62 AC009948.4-201ENST00000604692 675 ntBASIC3.21□□□□□ -1.9
RTL4Q6ZR62 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.21□□□□□ -1.9
RTL4Q6ZR62 MIR7975-201ENST00000619350 68 ntBASIC3.21□□□□□ -1.9
RTL4Q6ZR62 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC3.21□□□□□ -1.9
RTL4Q6ZR62 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.21□□□□□ -1.9
RTL4Q6ZR62 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.21□□□□□ -1.9
RTL4Q6ZR62 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
RTL4Q6ZR62 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
RTL4Q6ZR62 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
RTL4Q6ZR62 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.2□□□□□ -1.9
RTL4Q6ZR62 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
RTL4Q6ZR62 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
RTL4Q6ZR62 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RTL4Q6ZR62 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
RTL4Q6ZR62 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
RTL4Q6ZR62 RNU4-35P-201ENST00000362588 141 ntBASIC3.2□□□□□ -1.9
RTL4Q6ZR62 RNA5SP391-201ENST00000363456 119 ntBASIC3.2□□□□□ -1.9
RTL4Q6ZR62 SNORD115-48-201ENST00000364764 76 ntBASIC3.2□□□□□ -1.9
RTL4Q6ZR62 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RTL4Q6ZR62 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
RTL4Q6ZR62 EIF5P1-201ENST00000400019 1231 ntBASIC3.2□□□□□ -1.9
RTL4Q6ZR62 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RTL4Q6ZR62 ZNF965P-201ENST00000432501 817 ntBASIC3.2□□□□□ -1.9
RTL4Q6ZR62 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.2□□□□□ -1.9
RTL4Q6ZR62 AC097499.1-201ENST00000444277 208 ntBASIC3.2□□□□□ -1.9
RTL4Q6ZR62 AC125238.1-201ENST00000448842 249 ntBASIC3.2□□□□□ -1.9
RTL4Q6ZR62 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RTL4Q6ZR62 HMGN2P16-201ENST00000456802 261 ntBASIC3.2□□□□□ -1.9
RTL4Q6ZR62 RPL37P6-202ENST00000464216 403 ntBASIC3.2□□□□□ -1.9
RTL4Q6ZR62 RPL23AP67-201ENST00000465341 474 ntBASIC3.2□□□□□ -1.9
RTL4Q6ZR62 AC091153.1-201ENST00000466297 402 ntBASIC3.2□□□□□ -1.9
RTL4Q6ZR62 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.2□□□□□ -1.9
RTL4Q6ZR62 AC110792.2-201ENST00000510278 224 ntBASIC3.2□□□□□ -1.9
RTL4Q6ZR62 TMEM248P1-201ENST00000510579 951 ntBASIC3.2□□□□□ -1.9
RTL4Q6ZR62 AC093755.1-201ENST00000512950 1023 ntBASIC3.2□□□□□ -1.9
RTL4Q6ZR62 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RTL4Q6ZR62 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.2□□□□□ -1.9
RTL4Q6ZR62 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.2□□□□□ -1.9
RTL4Q6ZR62 AC007458.1-201ENST00000542812 373 ntBASIC3.2□□□□□ -1.9
RTL4Q6ZR62 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.2□□□□□ -1.9
RTL4Q6ZR62 TRAV37-201ENST00000553906 342 ntBASIC3.2□□□□□ -1.9
RTL4Q6ZR62 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.2□□□□□ -1.9
RTL4Q6ZR62 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.2□□□□□ -1.9
RTL4Q6ZR62 AC005951.1-201ENST00000576706 485 ntBASIC3.2□□□□□ -1.9
RTL4Q6ZR62 MIR3690-201ENST00000580266 75 ntBASIC3.2□□□□□ -1.9
RTL4Q6ZR62 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.2□□□□□ -1.9
RTL4Q6ZR62 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.2□□□□□ -1.9
RTL4Q6ZR62 AC011374.2-201ENST00000607135 526 ntBASIC3.2□□□□□ -1.9
RTL4Q6ZR62 AC243756.2-201ENST00000618406 463 ntBASIC3.2□□□□□ -1.9
RTL4Q6ZR62 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
RTL4Q6ZR62 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.19□□□□□ -1.9
RTL4Q6ZR62 FAM35CP-201ENST00000554755 2470 ntBASIC3.19□□□□□ -1.9
RTL4Q6ZR62 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RTL4Q6ZR62 MTND5P27-201ENST00000428871 1720 ntBASIC3.19□□□□□ -1.9
RTL4Q6ZR62 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RTL4Q6ZR62 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RTL4Q6ZR62 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.19□□□□□ -1.9
RTL4Q6ZR62 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.19□□□□□ -1.9
RTL4Q6ZR62 METTL21EP-201ENST00000298105 713 ntBASIC3.19□□□□□ -1.9
RTL4Q6ZR62 RPL7P26-201ENST00000333817 754 ntBASIC3.19□□□□□ -1.9
RTL4Q6ZR62 RNU6-600P-201ENST00000362524 99 ntBASIC3.19□□□□□ -1.9
RTL4Q6ZR62 SNORD51.1-201ENST00000365405 77 ntBASIC3.19□□□□□ -1.9
RTL4Q6ZR62 MIR490-201ENST00000384865 128 ntBASIC3.19□□□□□ -1.9
RTL4Q6ZR62 RN7SKP111-201ENST00000410349 271 ntBASIC3.19□□□□□ -1.9
RTL4Q6ZR62 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.19□□□□□ -1.9
RTL4Q6ZR62 CR848007.2-201ENST00000424918 787 ntBASIC3.19□□□□□ -1.9
RTL4Q6ZR62 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.19□□□□□ -1.9
RTL4Q6ZR62 AP000907.1-201ENST00000428428 510 ntBASIC3.19□□□□□ -1.9
RTL4Q6ZR62 HSPE1P28-201ENST00000443139 211 ntBASIC3.19□□□□□ -1.9
RTL4Q6ZR62 AC096992.1-201ENST00000459808 709 ntBASIC3.19□□□□□ -1.9
RTL4Q6ZR62 RPL21P10-201ENST00000463521 490 ntBASIC3.19□□□□□ -1.9
RTL4Q6ZR62 RPL32P34-201ENST00000486380 400 ntBASIC3.19□□□□□ -1.9
RTL4Q6ZR62 AP000563.1-201ENST00000490865 758 ntBASIC3.19□□□□□ -1.9
RTL4Q6ZR62 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RTL4Q6ZR62 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.19□□□□□ -1.9
RTL4Q6ZR62 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.19□□□□□ -1.9
RTL4Q6ZR62 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.19□□□□□ -1.9
RTL4Q6ZR62 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.19□□□□□ -1.9
RTL4Q6ZR62 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.19□□□□□ -1.9
RTL4Q6ZR62 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.19□□□□□ -1.9
RTL4Q6ZR62 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.19□□□□□ -1.9
RTL4Q6ZR62 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC3.19□□□□□ -1.9
RTL4Q6ZR62 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC3.19□□□□□ -1.9
RTL4Q6ZR62 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.19□□□□□ -1.9
RTL4Q6ZR62 AC011611.1-201ENST00000552179 197 ntBASIC3.19□□□□□ -1.9
RTL4Q6ZR62 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.19□□□□□ -1.9
RTL4Q6ZR62 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.19□□□□□ -1.9
RTL4Q6ZR62 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms