Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 RNA5SP129-201ENST00000410276 118 ntBASIC2.78□□□□□ -1.96
CCDC58Q4VC31 RNU6-1077P-201ENST00000410506 102 ntBASIC2.78□□□□□ -1.96
CCDC58Q4VC31 HMGN1P24-201ENST00000412282 298 ntBASIC2.78□□□□□ -1.96
CCDC58Q4VC31 RAD23BP2-201ENST00000416003 1207 ntBASIC2.78□□□□□ -1.96
CCDC58Q4VC31 BX842559.1-201ENST00000419615 532 ntBASIC2.78□□□□□ -1.96
CCDC58Q4VC31 KCTD10P1-201ENST00000434203 625 ntBASIC2.78□□□□□ -1.96
CCDC58Q4VC31 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC2.78□□□□□ -1.96
CCDC58Q4VC31 RPL7P15-201ENST00000461190 712 ntBASIC2.78□□□□□ -1.96
CCDC58Q4VC31 AC091959.2-201ENST00000477363 321 ntBASIC2.78□□□□□ -1.96
CCDC58Q4VC31 RPL7P38-201ENST00000488396 739 ntBASIC2.78□□□□□ -1.96
CCDC58Q4VC31 HMGB1P3-201ENST00000502802 616 ntBASIC2.78□□□□□ -1.96
CCDC58Q4VC31 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.78□□□□□ -1.96
CCDC58Q4VC31 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC2.78□□□□□ -1.96
CCDC58Q4VC31 AC025881.1-201ENST00000518851 512 ntBASIC2.78□□□□□ -1.96
CCDC58Q4VC31 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC2.78□□□□□ -1.96
CCDC58Q4VC31 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC2.78□□□□□ -1.96
CCDC58Q4VC31 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC2.78□□□□□ -1.96
CCDC58Q4VC31 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC2.78□□□□□ -1.96
CCDC58Q4VC31 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC2.78□□□□□ -1.96
CCDC58Q4VC31 CR392039.4-201ENST00000624968 501 ntBASIC2.78□□□□□ -1.96
CCDC58Q4VC31 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC2.78□□□□□ -1.96
CCDC58Q4VC31 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC2.78□□□□□ -1.97
CCDC58Q4VC31 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC2.78□□□□□ -1.97
CCDC58Q4VC31 ASNSP3-201ENST00000451989 1306 ntBASIC2.77□□□□□ -1.97
CCDC58Q4VC31 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CCDC58Q4VC31 OR1S2-201ENST00000302592 978 ntBASIC2.77□□□□□ -1.97
CCDC58Q4VC31 AC234772.1-201ENST00000377927 937 ntBASIC2.77□□□□□ -1.97
CCDC58Q4VC31 SNORA5A-201ENST00000384111 134 ntBASIC2.77□□□□□ -1.97
CCDC58Q4VC31 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
CCDC58Q4VC31 SNORD88.1-201ENST00000408684 91 ntBASIC2.77□□□□□ -1.97
CCDC58Q4VC31 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC2.77□□□□□ -1.97
CCDC58Q4VC31 CASKP1-201ENST00000412870 582 ntBASIC2.77□□□□□ -1.97
CCDC58Q4VC31 SYF2P2-201ENST00000417620 583 ntBASIC2.77□□□□□ -1.97
CCDC58Q4VC31 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC2.77□□□□□ -1.97
CCDC58Q4VC31 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.77□□□□□ -1.97
CCDC58Q4VC31 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC2.77□□□□□ -1.97
CCDC58Q4VC31 RPL21P110-201ENST00000433345 446 ntBASIC2.77□□□□□ -1.97
CCDC58Q4VC31 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC2.77□□□□□ -1.97
CCDC58Q4VC31 RNU7-27P-201ENST00000459281 62 ntBASIC2.77□□□□□ -1.97
CCDC58Q4VC31 ACTR3P3-201ENST00000480448 893 ntBASIC2.77□□□□□ -1.97
CCDC58Q4VC31 MTCO3P35-201ENST00000485582 781 ntBASIC2.77□□□□□ -1.97
CCDC58Q4VC31 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC2.77□□□□□ -1.97
CCDC58Q4VC31 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC2.77□□□□□ -1.97
CCDC58Q4VC31 SEM1P1-201ENST00000506694 209 ntBASIC2.77□□□□□ -1.97
CCDC58Q4VC31 AC090071.1-201ENST00000507713 644 ntBASIC2.77□□□□□ -1.97
CCDC58Q4VC31 RNU6-1073P-201ENST00000517182 106 ntBASIC2.77□□□□□ -1.97
CCDC58Q4VC31 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC2.77□□□□□ -1.97
CCDC58Q4VC31 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.77□□□□□ -1.97
CCDC58Q4VC31 GTF2IP22-201ENST00000554443 182 ntBASIC2.77□□□□□ -1.97
CCDC58Q4VC31 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC2.77□□□□□ -1.97
CCDC58Q4VC31 MIR2682-201ENST00000580305 110 ntBASIC2.77□□□□□ -1.97
CCDC58Q4VC31 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.77□□□□□ -1.97
CCDC58Q4VC31 AC015849.2-201ENST00000605738 409 ntBASIC2.77□□□□□ -1.97
CCDC58Q4VC31 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.77□□□□□ -1.97
CCDC58Q4VC31 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
CCDC58Q4VC31 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.77□□□□□ -1.97
CCDC58Q4VC31 ZNF285B-201ENST00000561698 1767 ntBASIC2.77□□□□□ -1.97
CCDC58Q4VC31 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CCDC58Q4VC31 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CCDC58Q4VC31 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.76□□□□□ -1.97
CCDC58Q4VC31 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.76□□□□□ -1.97
CCDC58Q4VC31 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.76□□□□□ -1.97
CCDC58Q4VC31 AC240504.1-201ENST00000395709 845 ntBASIC2.76□□□□□ -1.97
CCDC58Q4VC31 MIR1289-1-201ENST00000408836 144 ntBASIC2.76□□□□□ -1.97
CCDC58Q4VC31 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.76□□□□□ -1.97
CCDC58Q4VC31 RN7SKP220-201ENST00000410611 288 ntBASIC2.76□□□□□ -1.97
CCDC58Q4VC31 RN7SKP159-201ENST00000410657 292 ntBASIC2.76□□□□□ -1.97
CCDC58Q4VC31 BX682237.1-201ENST00000415016 335 ntBASIC2.76□□□□□ -1.97
CCDC58Q4VC31 AC004975.1-201ENST00000428733 208 ntBASIC2.76□□□□□ -1.97
CCDC58Q4VC31 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC2.76□□□□□ -1.97
CCDC58Q4VC31 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC2.76□□□□□ -1.97
CCDC58Q4VC31 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC2.76□□□□□ -1.97
CCDC58Q4VC31 RPL7P23-201ENST00000493874 747 ntBASIC2.76□□□□□ -1.97
CCDC58Q4VC31 CDH12P2-201ENST00000504393 298 ntBASIC2.76□□□□□ -1.97
CCDC58Q4VC31 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
CCDC58Q4VC31 MTND5P4-201ENST00000514978 288 ntBASIC2.76□□□□□ -1.97
CCDC58Q4VC31 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC2.76□□□□□ -1.97
CCDC58Q4VC31 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC2.76□□□□□ -1.97
CCDC58Q4VC31 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC2.76□□□□□ -1.97
CCDC58Q4VC31 AC069304.3-201ENST00000603938 1084 ntBASIC2.76□□□□□ -1.97
CCDC58Q4VC31 SNHG22-203ENST00000617833 660 ntBASIC2.76□□□□□ -1.97
CCDC58Q4VC31 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC2.76□□□□□ -1.97
CCDC58Q4VC31 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
CCDC58Q4VC31 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.75□□□□□ -1.97
CCDC58Q4VC31 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
CCDC58Q4VC31 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC2.75□□□□□ -1.97
CCDC58Q4VC31 AC026951.1-201ENST00000559530 2459 ntBASIC2.75□□□□□ -1.97
CCDC58Q4VC31 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
CCDC58Q4VC31 DEFB109C-201ENST00000382575 264 ntBASIC2.75□□□□□ -1.97
CCDC58Q4VC31 DEFB109B-201ENST00000382656 264 ntBASIC2.75□□□□□ -1.97
CCDC58Q4VC31 MIR141-201ENST00000384975 95 ntBASIC2.75□□□□□ -1.97
CCDC58Q4VC31 MIR218-2-201ENST00000385006 110 ntBASIC2.75□□□□□ -1.97
CCDC58Q4VC31 AC110754.1-201ENST00000399740 601 ntBASIC2.75□□□□□ -1.97
CCDC58Q4VC31 FO393413.1-201ENST00000402892 195 ntBASIC2.75□□□□□ -1.97
CCDC58Q4VC31 AL590004.2-201ENST00000404787 371 ntBASIC2.75□□□□□ -1.97
CCDC58Q4VC31 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC2.75□□□□□ -1.97
CCDC58Q4VC31 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC2.75□□□□□ -1.97
CCDC58Q4VC31 RPS6P14-201ENST00000425165 719 ntBASIC2.75□□□□□ -1.97
CCDC58Q4VC31 RAB28P3-201ENST00000448325 597 ntBASIC2.75□□□□□ -1.97
CCDC58Q4VC31 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms