Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AC245100.7-201ENST00000609678 442 ntBASIC3.58□□□□□ -1.84
RFX7Q2KHR2 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC3.58□□□□□ -1.84
RFX7Q2KHR2 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.58□□□□□ -1.84
RFX7Q2KHR2 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.58□□□□□ -1.84
RFX7Q2KHR2 AC093908.1-201ENST00000623125 8092 ntBASIC3.58□□□□□ -1.84
RFX7Q2KHR2 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RFX7Q2KHR2 MTCO1P24-201ENST00000515438 1558 ntBASIC3.57□□□□□ -1.84
RFX7Q2KHR2 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RFX7Q2KHR2 OR5J1P-201ENST00000313544 939 ntBASIC3.57□□□□□ -1.84
RFX7Q2KHR2 HMGB1P13-201ENST00000406019 642 ntBASIC3.57□□□□□ -1.84
RFX7Q2KHR2 RN7SKP284-201ENST00000411002 343 ntBASIC3.57□□□□□ -1.84
RFX7Q2KHR2 MTND2P2-201ENST00000434633 945 ntBASIC3.57□□□□□ -1.84
RFX7Q2KHR2 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.57□□□□□ -1.84
RFX7Q2KHR2 AC105272.1-201ENST00000438604 198 ntBASIC3.57□□□□□ -1.84
RFX7Q2KHR2 AC000041.1-201ENST00000439655 175 ntBASIC3.57□□□□□ -1.84
RFX7Q2KHR2 AC093156.1-201ENST00000440382 670 ntBASIC3.57□□□□□ -1.84
RFX7Q2KHR2 RPL9P32-201ENST00000464118 620 ntBASIC3.57□□□□□ -1.84
RFX7Q2KHR2 AC118282.1-201ENST00000506408 765 ntBASIC3.57□□□□□ -1.84
RFX7Q2KHR2 AC119751.1-201ENST00000513357 765 ntBASIC3.57□□□□□ -1.84
RFX7Q2KHR2 AC026801.2-201ENST00000515352 425 ntBASIC3.57□□□□□ -1.84
RFX7Q2KHR2 RN7SKP132-201ENST00000516001 208 ntBASIC3.57□□□□□ -1.84
RFX7Q2KHR2 RNA5SP380-201ENST00000517190 98 ntBASIC3.57□□□□□ -1.84
RFX7Q2KHR2 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.57□□□□□ -1.84
RFX7Q2KHR2 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.57□□□□□ -1.84
RFX7Q2KHR2 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC3.57□□□□□ -1.84
RFX7Q2KHR2 RPL12P50-201ENST00000603116 116 ntBASIC3.57□□□□□ -1.84
RFX7Q2KHR2 AC010200.2-201ENST00000605098 235 ntBASIC3.57□□□□□ -1.84
RFX7Q2KHR2 CYCSP41-201ENST00000616920 296 ntBASIC3.57□□□□□ -1.84
RFX7Q2KHR2 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.57□□□□□ -1.84
RFX7Q2KHR2 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RFX7Q2KHR2 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RFX7Q2KHR2 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
RFX7Q2KHR2 OR10AB1P-202ENST00000641219 1686 ntBASIC3.56□□□□□ -1.84
RFX7Q2KHR2 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
RFX7Q2KHR2 AC000367.1-201ENST00000452711 1766 ntBASIC3.56□□□□□ -1.84
RFX7Q2KHR2 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
RFX7Q2KHR2 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
RFX7Q2KHR2 U3.15-201ENST00000365398 212 ntBASIC3.56□□□□□ -1.84
RFX7Q2KHR2 U3.42-201ENST00000408746 214 ntBASIC3.56□□□□□ -1.84
RFX7Q2KHR2 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.56□□□□□ -1.84
RFX7Q2KHR2 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.56□□□□□ -1.84
RFX7Q2KHR2 AL138785.1-201ENST00000425821 331 ntBASIC3.56□□□□□ -1.84
RFX7Q2KHR2 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.56□□□□□ -1.84
RFX7Q2KHR2 ARF4P2-201ENST00000430209 526 ntBASIC3.56□□□□□ -1.84
RFX7Q2KHR2 AC112653.1-201ENST00000443851 386 ntBASIC3.56□□□□□ -1.84
RFX7Q2KHR2 AC005002.1-201ENST00000447458 540 ntBASIC3.56□□□□□ -1.84
RFX7Q2KHR2 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.56□□□□□ -1.84
RFX7Q2KHR2 DNAJC19P8-201ENST00000452887 259 ntBASIC3.56□□□□□ -1.84
RFX7Q2KHR2 AC004924.1-201ENST00000480160 781 ntBASIC3.56□□□□□ -1.84
RFX7Q2KHR2 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.56□□□□□ -1.84
RFX7Q2KHR2 VN1R104P-201ENST00000505115 1009 ntBASIC3.56□□□□□ -1.84
RFX7Q2KHR2 RN7SKP272-201ENST00000516988 232 ntBASIC3.56□□□□□ -1.84
RFX7Q2KHR2 AC010306.1-201ENST00000523223 1117 ntBASIC3.56□□□□□ -1.84
RFX7Q2KHR2 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.56□□□□□ -1.84
RFX7Q2KHR2 GTF3AP2-201ENST00000557014 266 ntBASIC3.56□□□□□ -1.84
RFX7Q2KHR2 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.56□□□□□ -1.84
RFX7Q2KHR2 MIR3162-201ENST00000581818 82 ntBASIC3.56□□□□□ -1.84
RFX7Q2KHR2 VN1R84P-201ENST00000593697 235 ntBASIC3.56□□□□□ -1.84
RFX7Q2KHR2 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC3.56□□□□□ -1.84
RFX7Q2KHR2 SYT14P1-202ENST00000600441 1448 ntBASIC3.56□□□□□ -1.84
RFX7Q2KHR2 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
RFX7Q2KHR2 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RFX7Q2KHR2 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
RFX7Q2KHR2 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.56□□□□□ -1.84
RFX7Q2KHR2 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RFX7Q2KHR2 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RFX7Q2KHR2 AC062016.1-201ENST00000355719 319 ntBASIC3.55□□□□□ -1.84
RFX7Q2KHR2 MIR449A-201ENST00000362113 91 ntBASIC3.55□□□□□ -1.84
RFX7Q2KHR2 SNORA18.3-201ENST00000384122 132 ntBASIC3.55□□□□□ -1.84
RFX7Q2KHR2 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.55□□□□□ -1.84
RFX7Q2KHR2 AL445528.1-201ENST00000426330 420 ntBASIC3.55□□□□□ -1.84
RFX7Q2KHR2 NAP1L4P3-201ENST00000432820 1147 ntBASIC3.55□□□□□ -1.84
RFX7Q2KHR2 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.55□□□□□ -1.84
RFX7Q2KHR2 CFTRP1-201ENST00000456646 183 ntBASIC3.55□□□□□ -1.84
RFX7Q2KHR2 AC078785.3-201ENST00000476607 425 ntBASIC3.55□□□□□ -1.84
RFX7Q2KHR2 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.55□□□□□ -1.84
RFX7Q2KHR2 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
RFX7Q2KHR2 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.55□□□□□ -1.84
RFX7Q2KHR2 AC055876.1-202ENST00000567053 138 ntBASIC3.55□□□□□ -1.84
RFX7Q2KHR2 AC015871.2-201ENST00000603605 948 ntBASIC3.55□□□□□ -1.84
RFX7Q2KHR2 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC3.55□□□□□ -1.84
RFX7Q2KHR2 CFTRP2-201ENST00000634304 199 ntBASIC3.55□□□□□ -1.84
RFX7Q2KHR2 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
RFX7Q2KHR2 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
RFX7Q2KHR2 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
RFX7Q2KHR2 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
RFX7Q2KHR2 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RFX7Q2KHR2 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.54□□□□□ -1.84
RFX7Q2KHR2 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RFX7Q2KHR2 RNU6-851P-201ENST00000384565 107 ntBASIC3.54□□□□□ -1.84
RFX7Q2KHR2 MTND4LP20-201ENST00000402379 270 ntBASIC3.54□□□□□ -1.84
RFX7Q2KHR2 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.54□□□□□ -1.84
RFX7Q2KHR2 AC092832.1-201ENST00000422934 400 ntBASIC3.54□□□□□ -1.84
RFX7Q2KHR2 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.54□□□□□ -1.84
RFX7Q2KHR2 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.54□□□□□ -1.84
RFX7Q2KHR2 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.54□□□□□ -1.84
RFX7Q2KHR2 AC112492.1-201ENST00000449607 712 ntBASIC3.54□□□□□ -1.84
RFX7Q2KHR2 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.54□□□□□ -1.84
RFX7Q2KHR2 AC083906.5-201ENST00000503722 328 ntBASIC3.54□□□□□ -1.84
RFX7Q2KHR2 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms