Protein–RNA interactions for Protein: Q12950

FOXD4, Forkhead box protein D4, humanhuman

Predicted RBP Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4Q12950 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.42□□□□□ -1.7
FOXD4Q12950 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.42□□□□□ -1.7
FOXD4Q12950 AC019193.2-201ENST00000610012 634 ntBASIC4.42□□□□□ -1.7
FOXD4Q12950 AL139418.1-201ENST00000613613 177 ntBASIC4.42□□□□□ -1.7
FOXD4Q12950 AC015967.1-201ENST00000619893 476 ntBASIC4.42□□□□□ -1.7
FOXD4Q12950 AP000484.1-201ENST00000620067 1252 ntBASIC4.42□□□□□ -1.7
FOXD4Q12950 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
FOXD4Q12950 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.42□□□□□ -1.7
FOXD4Q12950 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
FOXD4Q12950 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
FOXD4Q12950 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
FOXD4Q12950 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
FOXD4Q12950 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
FOXD4Q12950 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
FOXD4Q12950 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
FOXD4Q12950 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
FOXD4Q12950 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
FOXD4Q12950 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
FOXD4Q12950 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
FOXD4Q12950 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
FOXD4Q12950 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
FOXD4Q12950 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.41□□□□□ -1.7
FOXD4Q12950 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.41□□□□□ -1.7
FOXD4Q12950 IL6STP1-201ENST00000346911 1020 ntBASIC4.41□□□□□ -1.7
FOXD4Q12950 ARF4P3-201ENST00000397387 509 ntBASIC4.41□□□□□ -1.7
FOXD4Q12950 MIR1193-201ENST00000408109 78 ntBASIC4.41□□□□□ -1.7
FOXD4Q12950 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.41□□□□□ -1.7
FOXD4Q12950 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.41□□□□□ -1.7
FOXD4Q12950 FABP7P1-201ENST00000424004 391 ntBASIC4.41□□□□□ -1.7
FOXD4Q12950 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC4.41□□□□□ -1.7
FOXD4Q12950 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.41□□□□□ -1.7
FOXD4Q12950 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC4.41□□□□□ -1.7
FOXD4Q12950 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.41□□□□□ -1.7
FOXD4Q12950 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC4.41□□□□□ -1.7
FOXD4Q12950 RPS17P8-201ENST00000434525 335 ntBASIC4.41□□□□□ -1.7
FOXD4Q12950 AL451139.1-201ENST00000434718 346 ntBASIC4.41□□□□□ -1.7
FOXD4Q12950 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC4.41□□□□□ -1.7
FOXD4Q12950 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.41□□□□□ -1.7
FOXD4Q12950 USP9YP34-201ENST00000453983 808 ntBASIC4.41□□□□□ -1.7
FOXD4Q12950 CYCSP34-201ENST00000458172 304 ntBASIC4.41□□□□□ -1.7
FOXD4Q12950 RPL23AP56-201ENST00000460778 453 ntBASIC4.41□□□□□ -1.7
FOXD4Q12950 AC092757.1-201ENST00000467293 467 ntBASIC4.41□□□□□ -1.7
FOXD4Q12950 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.41□□□□□ -1.7
FOXD4Q12950 RPS23P3-201ENST00000470993 430 ntBASIC4.41□□□□□ -1.7
FOXD4Q12950 AC012181.1-201ENST00000479895 423 ntBASIC4.41□□□□□ -1.7
FOXD4Q12950 RN7SL558P-201ENST00000497468 299 ntBASIC4.41□□□□□ -1.7
FOXD4Q12950 AC140172.1-201ENST00000502928 141 ntBASIC4.41□□□□□ -1.7
FOXD4Q12950 BNIP3P41-201ENST00000503774 571 ntBASIC4.41□□□□□ -1.7
FOXD4Q12950 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.41□□□□□ -1.7
FOXD4Q12950 AC116353.3-201ENST00000511215 249 ntBASIC4.41□□□□□ -1.7
FOXD4Q12950 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC4.41□□□□□ -1.7
FOXD4Q12950 KCTD9P2-201ENST00000512203 1013 ntBASIC4.41□□□□□ -1.7
FOXD4Q12950 AC026412.2-201ENST00000512270 1075 ntBASIC4.41□□□□□ -1.7
FOXD4Q12950 RN7SKP31-201ENST00000516354 278 ntBASIC4.41□□□□□ -1.7
FOXD4Q12950 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.41□□□□□ -1.7
FOXD4Q12950 AL139174.1-201ENST00000531489 886 ntBASIC4.41□□□□□ -1.7
FOXD4Q12950 AC009643.1-201ENST00000532030 391 ntBASIC4.41□□□□□ -1.7
FOXD4Q12950 SNRPGP16-201ENST00000533275 226 ntBASIC4.41□□□□□ -1.7
FOXD4Q12950 AC125611.1-201ENST00000549563 229 ntBASIC4.41□□□□□ -1.7
FOXD4Q12950 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
FOXD4Q12950 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.41□□□□□ -1.7
FOXD4Q12950 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC4.41□□□□□ -1.7
FOXD4Q12950 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC4.41□□□□□ -1.7
FOXD4Q12950 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.41□□□□□ -1.7
FOXD4Q12950 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.41□□□□□ -1.7
FOXD4Q12950 AC091042.1-201ENST00000579213 173 ntBASIC4.41□□□□□ -1.7
FOXD4Q12950 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC4.41□□□□□ -1.7
FOXD4Q12950 CLIC4P2-201ENST00000601934 717 ntBASIC4.41□□□□□ -1.7
FOXD4Q12950 ELOCP35-201ENST00000604289 336 ntBASIC4.41□□□□□ -1.7
FOXD4Q12950 MEMO1P5-201ENST00000604810 406 ntBASIC4.41□□□□□ -1.7
FOXD4Q12950 AL158042.1-201ENST00000605338 460 ntBASIC4.41□□□□□ -1.7
FOXD4Q12950 AP001521.1-201ENST00000609150 300 ntBASIC4.41□□□□□ -1.7
FOXD4Q12950 AL392048.1-201ENST00000613946 534 ntBASIC4.41□□□□□ -1.7
FOXD4Q12950 AC069209.1-201ENST00000619282 651 ntBASIC4.41□□□□□ -1.7
FOXD4Q12950 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
FOXD4Q12950 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
FOXD4Q12950 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
FOXD4Q12950 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
FOXD4Q12950 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC4.41□□□□□ -1.7
FOXD4Q12950 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
FOXD4Q12950 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
FOXD4Q12950 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.4□□□□□ -1.7
FOXD4Q12950 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.7
FOXD4Q12950 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
FOXD4Q12950 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
FOXD4Q12950 RNA5SP332-201ENST00000391063 115 ntBASIC4.4□□□□□ -1.71
FOXD4Q12950 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.4□□□□□ -1.71
FOXD4Q12950 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.4□□□□□ -1.71
FOXD4Q12950 LUZP4P1-201ENST00000415420 344 ntBASIC4.4□□□□□ -1.71
FOXD4Q12950 AL137014.1-201ENST00000420490 1226 ntBASIC4.4□□□□□ -1.71
FOXD4Q12950 AC011233.1-201ENST00000422812 283 ntBASIC4.4□□□□□ -1.71
FOXD4Q12950 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC4.4□□□□□ -1.71
FOXD4Q12950 EIF1P3-201ENST00000423841 334 ntBASIC4.4□□□□□ -1.71
FOXD4Q12950 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.4□□□□□ -1.71
FOXD4Q12950 NMNAT1P2-201ENST00000435192 860 ntBASIC4.4□□□□□ -1.71
FOXD4Q12950 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.4□□□□□ -1.71
FOXD4Q12950 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
FOXD4Q12950 AC112498.1-201ENST00000444401 332 ntBASIC4.4□□□□□ -1.71
FOXD4Q12950 Z95327.1-201ENST00000446082 482 ntBASIC4.4□□□□□ -1.71
FOXD4Q12950 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms