Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CLDN18P56856 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.19□□□□□ -1.9
CLDN18P56856 RNU6-50P-201ENST00000362356 103 ntBASIC3.19□□□□□ -1.9
CLDN18P56856 SNORA63.1-201ENST00000362493 131 ntBASIC3.19□□□□□ -1.9
CLDN18P56856 RNU1-18P-201ENST00000363062 164 ntBASIC3.19□□□□□ -1.9
CLDN18P56856 Y_RNA.493-201ENST00000384422 102 ntBASIC3.19□□□□□ -1.9
CLDN18P56856 MIR183-201ENST00000384958 110 ntBASIC3.19□□□□□ -1.9
CLDN18P56856 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.19□□□□□ -1.9
CLDN18P56856 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CLDN18P56856 RNA5SP44-201ENST00000410446 133 ntBASIC3.19□□□□□ -1.9
CLDN18P56856 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.19□□□□□ -1.9
CLDN18P56856 AC068533.1-201ENST00000418542 415 ntBASIC3.19□□□□□ -1.9
CLDN18P56856 ETF1P3-201ENST00000430422 1160 ntBASIC3.19□□□□□ -1.9
CLDN18P56856 ATP5JP1-201ENST00000431631 322 ntBASIC3.19□□□□□ -1.9
CLDN18P56856 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC3.19□□□□□ -1.9
CLDN18P56856 AL691517.1-201ENST00000440833 1235 ntBASIC3.19□□□□□ -1.9
CLDN18P56856 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.19□□□□□ -1.9
CLDN18P56856 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.19□□□□□ -1.9
CLDN18P56856 RBMY2UP-201ENST00000453474 324 ntBASIC3.19□□□□□ -1.9
CLDN18P56856 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.19□□□□□ -1.9
CLDN18P56856 RN7SL93P-201ENST00000463035 293 ntBASIC3.19□□□□□ -1.9
CLDN18P56856 AC092754.2-201ENST00000463506 460 ntBASIC3.19□□□□□ -1.9
CLDN18P56856 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CLDN18P56856 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.19□□□□□ -1.9
CLDN18P56856 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.19□□□□□ -1.9
CLDN18P56856 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.19□□□□□ -1.9
CLDN18P56856 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
CLDN18P56856 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.19□□□□□ -1.9
CLDN18P56856 AC133963.2-201ENST00000513686 578 ntBASIC3.19□□□□□ -1.9
CLDN18P56856 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.19□□□□□ -1.9
CLDN18P56856 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC3.19□□□□□ -1.9
CLDN18P56856 AC008489.1-201ENST00000524271 483 ntBASIC3.19□□□□□ -1.9
CLDN18P56856 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.19□□□□□ -1.9
CLDN18P56856 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC3.19□□□□□ -1.9
CLDN18P56856 AC092470.1-201ENST00000546187 132 ntBASIC3.19□□□□□ -1.9
CLDN18P56856 AC012182.1-201ENST00000570133 895 ntBASIC3.19□□□□□ -1.9
CLDN18P56856 AC113368.1-201ENST00000603736 382 ntBASIC3.19□□□□□ -1.9
CLDN18P56856 HSPE1P14-201ENST00000605812 302 ntBASIC3.19□□□□□ -1.9
CLDN18P56856 AC069200.1-201ENST00000609511 323 ntBASIC3.19□□□□□ -1.9
CLDN18P56856 AC008121.2-201ENST00000614647 523 ntBASIC3.19□□□□□ -1.9
CLDN18P56856 AC012314.7-201ENST00000619693 93 ntBASIC3.19□□□□□ -1.9
CLDN18P56856 AC004777.1-201ENST00000624317 287 ntBASIC3.19□□□□□ -1.9
CLDN18P56856 AC244205.2-202ENST00000635781 342 ntBASIC3.19□□□□□ -1.9
CLDN18P56856 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC3.19□□□□□ -1.9
CLDN18P56856 U6.105-201ENST00000637379 88 ntBASIC3.19□□□□□ -1.9
CLDN18P56856 AC092326.2-201ENST00000624772 1561 ntBASIC3.19□□□□□ -1.9
CLDN18P56856 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.19□□□□□ -1.9
CLDN18P56856 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.19□□□□□ -1.9
CLDN18P56856 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
CLDN18P56856 AC021755.1-201ENST00000559747 1447 ntBASIC3.19□□□□□ -1.9
CLDN18P56856 ZNF542P-204ENST00000482727 1305 ntBASIC3.19□□□□□ -1.9
CLDN18P56856 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CLDN18P56856 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
CLDN18P56856 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.18□□□□□ -1.9
CLDN18P56856 MTND4P34-201ENST00000572715 1371 ntBASIC3.18□□□□□ -1.9
CLDN18P56856 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.18□□□□□ -1.9
CLDN18P56856 RNVU1-3-201ENST00000364313 161 ntBASIC3.18□□□□□ -1.9
CLDN18P56856 RNA5SP235-201ENST00000365411 114 ntBASIC3.18□□□□□ -1.9
CLDN18P56856 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CLDN18P56856 RNU6-629P-201ENST00000384061 103 ntBASIC3.18□□□□□ -1.9
CLDN18P56856 RNU6-1005P-201ENST00000384519 107 ntBASIC3.18□□□□□ -1.9
CLDN18P56856 U3.39-201ENST00000408569 239 ntBASIC3.18□□□□□ -1.9
CLDN18P56856 RN7SKP53-201ENST00000411337 315 ntBASIC3.18□□□□□ -1.9
CLDN18P56856 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.18□□□□□ -1.9
CLDN18P56856 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.18□□□□□ -1.9
CLDN18P56856 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.18□□□□□ -1.9
CLDN18P56856 AL159987.2-201ENST00000432754 307 ntBASIC3.18□□□□□ -1.9
CLDN18P56856 RPL21P110-201ENST00000433345 446 ntBASIC3.18□□□□□ -1.9
CLDN18P56856 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.18□□□□□ -1.9
CLDN18P56856 AC010881.1-201ENST00000433830 235 ntBASIC3.18□□□□□ -1.9
CLDN18P56856 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.18□□□□□ -1.9
CLDN18P56856 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.18□□□□□ -1.9
CLDN18P56856 RPS15AP29-201ENST00000445539 400 ntBASIC3.18□□□□□ -1.9
CLDN18P56856 MTND1P33-201ENST00000446251 917 ntBASIC3.18□□□□□ -1.9
CLDN18P56856 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.18□□□□□ -1.9
CLDN18P56856 NECAP1P2-201ENST00000455668 727 ntBASIC3.18□□□□□ -1.9
CLDN18P56856 AC010285.1-201ENST00000470580 392 ntBASIC3.18□□□□□ -1.9
CLDN18P56856 RPL12P22-201ENST00000519073 490 ntBASIC3.18□□□□□ -1.9
CLDN18P56856 AC093331.1-201ENST00000521474 169 ntBASIC3.18□□□□□ -1.9
CLDN18P56856 AC007458.1-201ENST00000542812 373 ntBASIC3.18□□□□□ -1.9
CLDN18P56856 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.18□□□□□ -1.9
CLDN18P56856 CCDC58P3-201ENST00000590792 430 ntBASIC3.18□□□□□ -1.9
CLDN18P56856 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.18□□□□□ -1.9
CLDN18P56856 AP001033.2-201ENST00000609701 1003 ntBASIC3.18□□□□□ -1.9
CLDN18P56856 AL450489.1-201ENST00000612071 468 ntBASIC3.18□□□□□ -1.9
CLDN18P56856 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
CLDN18P56856 U4.6-201ENST00000621618 127 ntBASIC3.18□□□□□ -1.9
CLDN18P56856 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.18□□□□□ -1.9
CLDN18P56856 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
CLDN18P56856 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.18□□□□□ -1.9
CLDN18P56856 MTCO1P12-201ENST00000414273 1543 ntBASIC3.18□□□□□ -1.9
CLDN18P56856 ZNF734P-201ENST00000419494 1534 ntBASIC3.18□□□□□ -1.9
CLDN18P56856 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CLDN18P56856 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CLDN18P56856 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
CLDN18P56856 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
CLDN18P56856 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
CLDN18P56856 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CLDN18P56856 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CLDN18P56856 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms