Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
SUMO3P55854 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SUMO3P55854 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.45□□□□□ -1.7
SUMO3P55854 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
SUMO3P55854 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SUMO3P55854 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.45□□□□□ -1.7
SUMO3P55854 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
SUMO3P55854 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.44□□□□□ -1.7
SUMO3P55854 AC092125.1-201ENST00000562568 1995 ntBASIC4.44□□□□□ -1.7
SUMO3P55854 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SUMO3P55854 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
SUMO3P55854 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SUMO3P55854 Y_RNA.46-201ENST00000362695 102 ntBASIC4.44□□□□□ -1.7
SUMO3P55854 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.44□□□□□ -1.7
SUMO3P55854 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
SUMO3P55854 AL645733.1-201ENST00000402250 217 ntBASIC4.44□□□□□ -1.7
SUMO3P55854 AL357515.1-201ENST00000402967 542 ntBASIC4.44□□□□□ -1.7
SUMO3P55854 RPL7P25-201ENST00000404151 721 ntBASIC4.44□□□□□ -1.7
SUMO3P55854 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC4.44□□□□□ -1.7
SUMO3P55854 HMGB3P23-201ENST00000414981 585 ntBASIC4.44□□□□□ -1.7
SUMO3P55854 MTCO1P21-201ENST00000416634 589 ntBASIC4.44□□□□□ -1.7
SUMO3P55854 RPS12P23-201ENST00000419579 400 ntBASIC4.44□□□□□ -1.7
SUMO3P55854 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SUMO3P55854 RPS3AP44-201ENST00000425466 790 ntBASIC4.44□□□□□ -1.7
SUMO3P55854 OR5BE1P-201ENST00000425977 939 ntBASIC4.44□□□□□ -1.7
SUMO3P55854 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC4.44□□□□□ -1.7
SUMO3P55854 AC010975.2-201ENST00000427781 588 ntBASIC4.44□□□□□ -1.7
SUMO3P55854 NANOGP6-201ENST00000429190 847 ntBASIC4.44□□□□□ -1.7
SUMO3P55854 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC4.44□□□□□ -1.7
SUMO3P55854 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.44□□□□□ -1.7
SUMO3P55854 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.44□□□□□ -1.7
SUMO3P55854 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC4.44□□□□□ -1.7
SUMO3P55854 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.44□□□□□ -1.7
SUMO3P55854 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC4.44□□□□□ -1.7
SUMO3P55854 AC012512.1-201ENST00000446594 718 ntBASIC4.44□□□□□ -1.7
SUMO3P55854 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.44□□□□□ -1.7
SUMO3P55854 AC098824.1-201ENST00000453565 980 ntBASIC4.44□□□□□ -1.7
SUMO3P55854 AC053481.1-201ENST00000467217 306 ntBASIC4.44□□□□□ -1.7
SUMO3P55854 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.44□□□□□ -1.7
SUMO3P55854 AC104763.1-201ENST00000475274 360 ntBASIC4.44□□□□□ -1.7
SUMO3P55854 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.44□□□□□ -1.7
SUMO3P55854 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.44□□□□□ -1.7
SUMO3P55854 AC096751.1-202ENST00000502691 1067 ntBASIC4.44□□□□□ -1.7
SUMO3P55854 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC4.44□□□□□ -1.7
SUMO3P55854 MRPS33P2-201ENST00000507850 322 ntBASIC4.44□□□□□ -1.7
SUMO3P55854 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC4.44□□□□□ -1.7
SUMO3P55854 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.44□□□□□ -1.7
SUMO3P55854 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.44□□□□□ -1.7
SUMO3P55854 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.44□□□□□ -1.7
SUMO3P55854 AC008033.2-201ENST00000542626 177 ntBASIC4.44□□□□□ -1.7
SUMO3P55854 RPL21P5-201ENST00000554662 472 ntBASIC4.44□□□□□ -1.7
SUMO3P55854 AC034268.2-201ENST00000571784 482 ntBASIC4.44□□□□□ -1.7
SUMO3P55854 AC137800.2-201ENST00000574375 120 ntBASIC4.44□□□□□ -1.7
SUMO3P55854 DEFB131E-202ENST00000602581 683 ntBASIC4.44□□□□□ -1.7
SUMO3P55854 IGHV3-29-201ENST00000604817 344 ntBASIC4.44□□□□□ -1.7
SUMO3P55854 AC090578.1-201ENST00000604955 591 ntBASIC4.44□□□□□ -1.7
SUMO3P55854 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SUMO3P55854 AC006338.2-201ENST00000616864 791 ntBASIC4.44□□□□□ -1.7
SUMO3P55854 AC099654.13-201ENST00000639774 207 ntBASIC4.44□□□□□ -1.7
SUMO3P55854 OR5BE1P-202ENST00000641168 1176 ntBASIC4.44□□□□□ -1.7
SUMO3P55854 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SUMO3P55854 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.44□□□□□ -1.7
SUMO3P55854 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
SUMO3P55854 AC025031.4-201ENST00000621248 3271 ntBASIC4.44□□□□□ -1.7
SUMO3P55854 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
SUMO3P55854 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.44□□□□□ -1.7
SUMO3P55854 MTND5P3-201ENST00000438536 1800 ntBASIC4.44□□□□□ -1.7
SUMO3P55854 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
SUMO3P55854 AC107068.1-201ENST00000563286 4218 ntBASIC4.44□□□□□ -1.7
SUMO3P55854 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.44□□□□□ -1.7
SUMO3P55854 AC104260.2-201ENST00000623551 3497 ntBASIC4.44□□□□□ -1.7
SUMO3P55854 ZFRP1-201ENST00000457579 2970 ntBASIC4.44□□□□□ -1.7
SUMO3P55854 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SUMO3P55854 MTND5P33-201ENST00000571250 1450 ntBASIC4.43□□□□□ -1.7
SUMO3P55854 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SUMO3P55854 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SUMO3P55854 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.43□□□□□ -1.7
SUMO3P55854 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
SUMO3P55854 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
SUMO3P55854 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.43□□□□□ -1.7
SUMO3P55854 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SUMO3P55854 RN7SKP104-201ENST00000362605 328 ntBASIC4.43□□□□□ -1.7
SUMO3P55854 RNA5SP123-201ENST00000363244 119 ntBASIC4.43□□□□□ -1.7
SUMO3P55854 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
SUMO3P55854 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
SUMO3P55854 RNU6-648P-201ENST00000410190 107 ntBASIC4.43□□□□□ -1.7
SUMO3P55854 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.43□□□□□ -1.7
SUMO3P55854 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC4.43□□□□□ -1.7
SUMO3P55854 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC4.43□□□□□ -1.7
SUMO3P55854 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC4.43□□□□□ -1.7
SUMO3P55854 MRPS18BP2-201ENST00000434310 759 ntBASIC4.43□□□□□ -1.7
SUMO3P55854 AL451139.1-201ENST00000434718 346 ntBASIC4.43□□□□□ -1.7
SUMO3P55854 Z74696.2-201ENST00000436514 498 ntBASIC4.43□□□□□ -1.7
SUMO3P55854 UBE2V1P13-201ENST00000436983 439 ntBASIC4.43□□□□□ -1.7
SUMO3P55854 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.43□□□□□ -1.7
SUMO3P55854 MTND6P13-201ENST00000443510 523 ntBASIC4.43□□□□□ -1.7
SUMO3P55854 AC112498.1-201ENST00000444401 332 ntBASIC4.43□□□□□ -1.7
SUMO3P55854 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC4.43□□□□□ -1.7
SUMO3P55854 SNORD121B-201ENST00000458838 81 ntBASIC4.43□□□□□ -1.7
SUMO3P55854 RN7SL558P-201ENST00000497468 299 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms