Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
CDH4P55283 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CDH4P55283 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CDH4P55283 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
CDH4P55283 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.54□□□□□ -1.84
CDH4P55283 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.54□□□□□ -1.84
CDH4P55283 SNORA31-201ENST00000362607 130 ntBASIC3.54□□□□□ -1.84
CDH4P55283 MIR490-201ENST00000384865 128 ntBASIC3.54□□□□□ -1.84
CDH4P55283 MIR525-201ENST00000384978 85 ntBASIC3.54□□□□□ -1.84
CDH4P55283 MIR1250-201ENST00000408098 113 ntBASIC3.54□□□□□ -1.84
CDH4P55283 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.54□□□□□ -1.84
CDH4P55283 RPL21P110-201ENST00000433345 446 ntBASIC3.54□□□□□ -1.84
CDH4P55283 HMGB1P45-201ENST00000435986 653 ntBASIC3.54□□□□□ -1.84
CDH4P55283 AC006994.1-201ENST00000438212 839 ntBASIC3.54□□□□□ -1.84
CDH4P55283 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.54□□□□□ -1.84
CDH4P55283 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.54□□□□□ -1.84
CDH4P55283 RPL26P28-201ENST00000451325 435 ntBASIC3.54□□□□□ -1.84
CDH4P55283 AC087879.1-201ENST00000474343 374 ntBASIC3.54□□□□□ -1.84
CDH4P55283 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CDH4P55283 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.54□□□□□ -1.84
CDH4P55283 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.54□□□□□ -1.84
CDH4P55283 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.54□□□□□ -1.84
CDH4P55283 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.54□□□□□ -1.84
CDH4P55283 IGKV2-26-201ENST00000518305 343 ntBASIC3.54□□□□□ -1.84
CDH4P55283 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.54□□□□□ -1.84
CDH4P55283 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.54□□□□□ -1.84
CDH4P55283 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.54□□□□□ -1.84
CDH4P55283 OSBPL9P3-201ENST00000534523 595 ntBASIC3.54□□□□□ -1.84
CDH4P55283 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.54□□□□□ -1.84
CDH4P55283 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.54□□□□□ -1.84
CDH4P55283 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.54□□□□□ -1.84
CDH4P55283 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.54□□□□□ -1.84
CDH4P55283 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CDH4P55283 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.54□□□□□ -1.84
CDH4P55283 MIR4738-201ENST00000579134 87 ntBASIC3.54□□□□□ -1.84
CDH4P55283 AC090616.5-202ENST00000582111 297 ntBASIC3.54□□□□□ -1.84
CDH4P55283 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.54□□□□□ -1.84
CDH4P55283 AC112503.2-201ENST00000609005 552 ntBASIC3.54□□□□□ -1.84
CDH4P55283 AC096586.1-201ENST00000610267 561 ntBASIC3.54□□□□□ -1.84
CDH4P55283 AC084757.4-201ENST00000616350 526 ntBASIC3.54□□□□□ -1.84
CDH4P55283 AC244100.1-202ENST00000621554 382 ntBASIC3.54□□□□□ -1.84
CDH4P55283 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CDH4P55283 AC032011.1-201ENST00000611703 1549 ntBASIC3.54□□□□□ -1.84
CDH4P55283 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CDH4P55283 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CDH4P55283 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CDH4P55283 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
CDH4P55283 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
CDH4P55283 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
CDH4P55283 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CDH4P55283 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CDH4P55283 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CDH4P55283 AL589826.1-201ENST00000340697 249 ntBASIC3.53□□□□□ -1.84
CDH4P55283 RNU6-650P-201ENST00000365658 111 ntBASIC3.53□□□□□ -1.84
CDH4P55283 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.53□□□□□ -1.84
CDH4P55283 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
CDH4P55283 EIF5P1-201ENST00000400019 1231 ntBASIC3.53□□□□□ -1.84
CDH4P55283 MTCO3P31-201ENST00000405526 789 ntBASIC3.53□□□□□ -1.84
CDH4P55283 AC244098.2-201ENST00000422068 99 ntBASIC3.53□□□□□ -1.84
CDH4P55283 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CDH4P55283 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.53□□□□□ -1.84
CDH4P55283 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.53□□□□□ -1.84
CDH4P55283 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.53□□□□□ -1.84
CDH4P55283 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.53□□□□□ -1.84
CDH4P55283 AP000893.1-201ENST00000474462 794 ntBASIC3.53□□□□□ -1.84
CDH4P55283 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CDH4P55283 AP000563.1-201ENST00000490865 758 ntBASIC3.53□□□□□ -1.84
CDH4P55283 FCF1P8-201ENST00000510322 597 ntBASIC3.53□□□□□ -1.84
CDH4P55283 SNORA70.19-201ENST00000516717 90 ntBASIC3.53□□□□□ -1.84
CDH4P55283 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.53□□□□□ -1.84
CDH4P55283 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.53□□□□□ -1.84
CDH4P55283 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.53□□□□□ -1.84
CDH4P55283 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.53□□□□□ -1.84
CDH4P55283 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.53□□□□□ -1.84
CDH4P55283 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.53□□□□□ -1.84
CDH4P55283 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC3.53□□□□□ -1.84
CDH4P55283 AC024220.1-201ENST00000603675 484 ntBASIC3.53□□□□□ -1.84
CDH4P55283 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
CDH4P55283 MIR7975-201ENST00000619350 68 ntBASIC3.53□□□□□ -1.84
CDH4P55283 XIST_intron.1-201ENST00000619444 68 ntBASIC3.53□□□□□ -1.84
CDH4P55283 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
CDH4P55283 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.53□□□□□ -1.84
CDH4P55283 HPVC1-201ENST00000629899 1198 ntBASIC3.53□□□□□ -1.84
CDH4P55283 AL356274.2-201ENST00000624379 3752 ntBASIC3.53□□□□□ -1.84
CDH4P55283 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.53□□□□□ -1.84
CDH4P55283 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.53□□□□□ -1.84
CDH4P55283 PABPC1P7-201ENST00000413177 1513 ntBASIC3.53□□□□□ -1.84
CDH4P55283 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CDH4P55283 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CDH4P55283 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.52□□□□□ -1.85
CDH4P55283 AC138915.3-201ENST00000562908 1389 ntBASIC3.52□□□□□ -1.85
CDH4P55283 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CDH4P55283 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.52□□□□□ -1.85
CDH4P55283 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
CDH4P55283 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CDH4P55283 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.52□□□□□ -1.85
CDH4P55283 RNU6-600P-201ENST00000362524 99 ntBASIC3.52□□□□□ -1.85
CDH4P55283 RNU1-33P-201ENST00000364249 162 ntBASIC3.52□□□□□ -1.85
CDH4P55283 ATP5F1P6-201ENST00000402768 767 ntBASIC3.52□□□□□ -1.85
CDH4P55283 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 144.1 ms