Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 VN1R9P-201ENST00000614184 867 ntBASIC2.91□□□□□ -1.94
BRCA2P51587 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC2.91□□□□□ -1.94
BRCA2P51587 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC2.91□□□□□ -1.94
BRCA2P51587 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.91□□□□□ -1.94
BRCA2P51587 AC007621.1-201ENST00000604544 437 ntBASIC2.91□□□□□ -1.94
BRCA2P51587 CUL1P1-201ENST00000509510 2425 ntBASIC2.91□□□□□ -1.94
BRCA2P51587 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
BRCA2P51587 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.91□□□□□ -1.94
BRCA2P51587 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
BRCA2P51587 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
BRCA2P51587 PRELID3BP7-201ENST00000503606 469 ntBASIC2.91□□□□□ -1.94
BRCA2P51587 OR5AK3P-201ENST00000527486 1297 ntBASIC2.91□□□□□ -1.94
BRCA2P51587 AL391156.1-201ENST00000554965 554 ntBASIC2.91□□□□□ -1.94
BRCA2P51587 AC011270.1-201ENST00000558606 583 ntBASIC2.91□□□□□ -1.94
BRCA2P51587 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC2.91□□□□□ -1.94
BRCA2P51587 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC2.91□□□□□ -1.94
BRCA2P51587 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC2.91□□□□□ -1.94
BRCA2P51587 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC2.91□□□□□ -1.94
BRCA2P51587 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.94
BRCA2P51587 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
BRCA2P51587 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.9□□□□□ -1.94
BRCA2P51587 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.9□□□□□ -1.94
BRCA2P51587 RPL31P45-201ENST00000419532 356 ntBASIC2.9□□□□□ -1.94
BRCA2P51587 RN7SL636P-201ENST00000497504 294 ntBASIC2.9□□□□□ -1.94
BRCA2P51587 TRAV11-201ENST00000539512 339 ntBASIC2.9□□□□□ -1.94
BRCA2P51587 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC2.9□□□□□ -1.94
BRCA2P51587 AC093673.2-201ENST00000609674 331 ntBASIC2.9□□□□□ -1.94
BRCA2P51587 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
BRCA2P51587 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC2.9□□□□□ -1.94
BRCA2P51587 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
BRCA2P51587 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.94
BRCA2P51587 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC2.9□□□□□ -1.94
BRCA2P51587 Z82209.1-201ENST00000422141 2135 ntBASIC2.9□□□□□ -1.94
BRCA2P51587 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
BRCA2P51587 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
BRCA2P51587 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.95
BRCA2P51587 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
BRCA2P51587 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.9□□□□□ -1.95
BRCA2P51587 RNU6-1053P-201ENST00000515930 101 ntBASIC2.9□□□□□ -1.95
BRCA2P51587 MIR2276-201ENST00000516886 89 ntBASIC2.9□□□□□ -1.95
BRCA2P51587 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC2.9□□□□□ -1.95
BRCA2P51587 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
BRCA2P51587 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
BRCA2P51587 YPEL5P1-201ENST00000419731 367 ntBASIC2.9□□□□□ -1.95
BRCA2P51587 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC2.9□□□□□ -1.95
BRCA2P51587 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.9□□□□□ -1.95
BRCA2P51587 AC009570.1-201ENST00000609599 745 ntBASIC2.9□□□□□ -1.95
BRCA2P51587 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.9□□□□□ -1.95
BRCA2P51587 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
BRCA2P51587 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC2.9□□□□□ -1.95
BRCA2P51587 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
BRCA2P51587 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
BRCA2P51587 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
BRCA2P51587 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC2.89□□□□□ -1.95
BRCA2P51587 AC096644.4-201ENST00000563417 2912 ntBASIC2.89□□□□□ -1.95
BRCA2P51587 ELL2P4-201ENST00000446870 1376 ntBASIC2.89□□□□□ -1.95
BRCA2P51587 snoU13.18-201ENST00000459483 104 ntBASIC2.89□□□□□ -1.95
BRCA2P51587 RPL23AP71-201ENST00000470966 469 ntBASIC2.89□□□□□ -1.95
BRCA2P51587 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
BRCA2P51587 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC2.89□□□□□ -1.95
BRCA2P51587 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC2.89□□□□□ -1.95
BRCA2P51587 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC2.89□□□□□ -1.95
BRCA2P51587 NRBF2P1-201ENST00000587407 859 ntBASIC2.89□□□□□ -1.95
BRCA2P51587 RMST_8.1-201ENST00000610287 165 ntBASIC2.89□□□□□ -1.95
BRCA2P51587 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.89□□□□□ -1.95
BRCA2P51587 AC104454.1-201ENST00000421341 1401 ntBASIC2.89□□□□□ -1.95
BRCA2P51587 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC2.89□□□□□ -1.95
BRCA2P51587 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC2.89□□□□□ -1.95
BRCA2P51587 OR10AB1P-202ENST00000641219 1686 ntBASIC2.89□□□□□ -1.95
BRCA2P51587 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.89□□□□□ -1.95
BRCA2P51587 AL121882.1-201ENST00000422893 417 ntBASIC2.89□□□□□ -1.95
BRCA2P51587 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.89□□□□□ -1.95
BRCA2P51587 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
BRCA2P51587 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC2.89□□□□□ -1.95
BRCA2P51587 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.89□□□□□ -1.95
BRCA2P51587 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.89□□□□□ -1.95
BRCA2P51587 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
BRCA2P51587 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
BRCA2P51587 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
BRCA2P51587 RNU6-55P-201ENST00000411092 107 ntBASIC2.89□□□□□ -1.95
BRCA2P51587 RNU6-954P-201ENST00000411355 107 ntBASIC2.89□□□□□ -1.95
BRCA2P51587 CYCSP49-201ENST00000420810 319 ntBASIC2.89□□□□□ -1.95
BRCA2P51587 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC2.89□□□□□ -1.95
BRCA2P51587 AC234781.5-201ENST00000508429 271 ntBASIC2.89□□□□□ -1.95
BRCA2P51587 SCGB1D5P-201ENST00000515134 247 ntBASIC2.89□□□□□ -1.95
BRCA2P51587 AC233702.9-201ENST00000581528 203 ntBASIC2.89□□□□□ -1.95
BRCA2P51587 AC023043.2-201ENST00000589678 1026 ntBASIC2.89□□□□□ -1.95
BRCA2P51587 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC2.88□□□□□ -1.95
BRCA2P51587 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
BRCA2P51587 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.88□□□□□ -1.95
BRCA2P51587 Z82195.1-201ENST00000604558 398 ntBASIC2.88□□□□□ -1.95
BRCA2P51587 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
BRCA2P51587 AL355493.4-201ENST00000618530 292 ntBASIC2.88□□□□□ -1.95
BRCA2P51587 AC074276.2-201ENST00000619891 348 ntBASIC2.88□□□□□ -1.95
BRCA2P51587 AC006111.3-201ENST00000622137 383 ntBASIC2.88□□□□□ -1.95
BRCA2P51587 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
BRCA2P51587 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
BRCA2P51587 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
BRCA2P51587 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
BRCA2P51587 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms