Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
SLC1A1P43005 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SLC1A1P43005 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SLC1A1P43005 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SLC1A1P43005 AC104446.1-201ENST00000613728 1321 ntBASIC3.43□□□□□ -1.86
SLC1A1P43005 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
SLC1A1P43005 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.42□□□□□ -1.86
SLC1A1P43005 AL049781.1-201ENST00000623195 3585 ntBASIC3.42□□□□□ -1.86
SLC1A1P43005 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SLC1A1P43005 RNU6-543P-201ENST00000362576 108 ntBASIC3.42□□□□□ -1.86
SLC1A1P43005 RNA5SP119-201ENST00000362715 117 ntBASIC3.42□□□□□ -1.86
SLC1A1P43005 AC241520.1-201ENST00000422654 1099 ntBASIC3.42□□□□□ -1.86
SLC1A1P43005 CKS1BP5-201ENST00000434172 273 ntBASIC3.42□□□□□ -1.86
SLC1A1P43005 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.42□□□□□ -1.86
SLC1A1P43005 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.42□□□□□ -1.86
SLC1A1P43005 RPS27P5-201ENST00000444247 244 ntBASIC3.42□□□□□ -1.86
SLC1A1P43005 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.42□□□□□ -1.86
SLC1A1P43005 AC091564.1-201ENST00000464563 479 ntBASIC3.42□□□□□ -1.86
SLC1A1P43005 AC146507.1-201ENST00000468335 354 ntBASIC3.42□□□□□ -1.86
SLC1A1P43005 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.42□□□□□ -1.86
SLC1A1P43005 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SLC1A1P43005 AC093755.1-201ENST00000512950 1023 ntBASIC3.42□□□□□ -1.86
SLC1A1P43005 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.42□□□□□ -1.86
SLC1A1P43005 RN7SKP96-201ENST00000516948 297 ntBASIC3.42□□□□□ -1.86
SLC1A1P43005 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.42□□□□□ -1.86
SLC1A1P43005 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.42□□□□□ -1.86
SLC1A1P43005 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.42□□□□□ -1.86
SLC1A1P43005 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.42□□□□□ -1.86
SLC1A1P43005 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.42□□□□□ -1.86
SLC1A1P43005 AL442163.2-201ENST00000553912 710 ntBASIC3.42□□□□□ -1.86
SLC1A1P43005 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.42□□□□□ -1.86
SLC1A1P43005 BNIP3P5-201ENST00000562290 498 ntBASIC3.42□□□□□ -1.86
SLC1A1P43005 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.42□□□□□ -1.86
SLC1A1P43005 MIR5186-201ENST00000577504 120 ntBASIC3.42□□□□□ -1.86
SLC1A1P43005 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.42□□□□□ -1.86
SLC1A1P43005 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.42□□□□□ -1.86
SLC1A1P43005 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.42□□□□□ -1.86
SLC1A1P43005 SNORA51-201ENST00000606420 132 ntBASIC3.42□□□□□ -1.86
SLC1A1P43005 AL591516.1-201ENST00000611326 274 ntBASIC3.42□□□□□ -1.86
SLC1A1P43005 AL157817.1-201ENST00000614264 790 ntBASIC3.42□□□□□ -1.86
SLC1A1P43005 MIR1264-201ENST00000616374 69 ntBASIC3.42□□□□□ -1.86
SLC1A1P43005 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.42□□□□□ -1.86
SLC1A1P43005 CR392039.5-201ENST00000623201 510 ntBASIC3.42□□□□□ -1.86
SLC1A1P43005 AC091903.1-201ENST00000624322 454 ntBASIC3.42□□□□□ -1.86
SLC1A1P43005 FRG1DP-201ENST00000635586 771 ntBASIC3.42□□□□□ -1.86
SLC1A1P43005 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.42□□□□□ -1.86
SLC1A1P43005 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.42□□□□□ -1.86
SLC1A1P43005 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.41□□□□□ -1.86
SLC1A1P43005 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SLC1A1P43005 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
SLC1A1P43005 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.41□□□□□ -1.86
SLC1A1P43005 MIR591-201ENST00000385290 95 ntBASIC3.41□□□□□ -1.86
SLC1A1P43005 AL583834.1-201ENST00000406943 343 ntBASIC3.41□□□□□ -1.86
SLC1A1P43005 TATDN1P1-201ENST00000414123 891 ntBASIC3.41□□□□□ -1.86
SLC1A1P43005 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.41□□□□□ -1.86
SLC1A1P43005 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.41□□□□□ -1.86
SLC1A1P43005 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.41□□□□□ -1.86
SLC1A1P43005 OR51AB1P-201ENST00000429046 620 ntBASIC3.41□□□□□ -1.86
SLC1A1P43005 PSMA2P3-201ENST00000429685 675 ntBASIC3.41□□□□□ -1.86
SLC1A1P43005 AC005189.1-201ENST00000431286 310 ntBASIC3.41□□□□□ -1.86
SLC1A1P43005 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.41□□□□□ -1.86
SLC1A1P43005 ZFAND6P1-201ENST00000434138 605 ntBASIC3.41□□□□□ -1.86
SLC1A1P43005 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.41□□□□□ -1.86
SLC1A1P43005 RPL23AP33-201ENST00000442301 452 ntBASIC3.41□□□□□ -1.86
SLC1A1P43005 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.41□□□□□ -1.86
SLC1A1P43005 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.41□□□□□ -1.86
SLC1A1P43005 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.41□□□□□ -1.86
SLC1A1P43005 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.41□□□□□ -1.86
SLC1A1P43005 AC008565.1-201ENST00000509046 885 ntBASIC3.41□□□□□ -1.86
SLC1A1P43005 RNA5SP380-201ENST00000517190 98 ntBASIC3.41□□□□□ -1.86
SLC1A1P43005 AP001207.2-201ENST00000519490 539 ntBASIC3.41□□□□□ -1.86
SLC1A1P43005 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.41□□□□□ -1.86
SLC1A1P43005 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.41□□□□□ -1.86
SLC1A1P43005 IGKV2D-19-201ENST00000523346 262 ntBASIC3.41□□□□□ -1.86
SLC1A1P43005 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.41□□□□□ -1.86
SLC1A1P43005 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.41□□□□□ -1.86
SLC1A1P43005 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.41□□□□□ -1.86
SLC1A1P43005 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.41□□□□□ -1.86
SLC1A1P43005 AC090312.2-201ENST00000582687 378 ntBASIC3.41□□□□□ -1.86
SLC1A1P43005 MIR4276-201ENST00000584832 70 ntBASIC3.41□□□□□ -1.86
SLC1A1P43005 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.41□□□□□ -1.86
SLC1A1P43005 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.41□□□□□ -1.86
SLC1A1P43005 STMN1P1-201ENST00000617809 440 ntBASIC3.41□□□□□ -1.86
SLC1A1P43005 AC039056.2-201ENST00000622261 511 ntBASIC3.41□□□□□ -1.86
SLC1A1P43005 MTND5P3-201ENST00000438536 1800 ntBASIC3.41□□□□□ -1.86
SLC1A1P43005 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.41□□□□□ -1.86
SLC1A1P43005 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SLC1A1P43005 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SLC1A1P43005 Z83843.1-201ENST00000604070 3685 ntBASIC3.41□□□□□ -1.86
SLC1A1P43005 AC118273.1-201ENST00000525324 3006 ntBASIC3.41□□□□□ -1.86
SLC1A1P43005 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.4□□□□□ -1.86
SLC1A1P43005 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
SLC1A1P43005 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.4□□□□□ -1.86
SLC1A1P43005 AC004972.1-201ENST00000623934 2209 ntBASIC3.4□□□□□ -1.86
SLC1A1P43005 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.4□□□□□ -1.86
SLC1A1P43005 AL592494.2-201ENST00000425455 1548 ntBASIC3.4□□□□□ -1.86
SLC1A1P43005 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SLC1A1P43005 MIR554-201ENST00000384874 96 ntBASIC3.4□□□□□ -1.87
SLC1A1P43005 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SLC1A1P43005 PNRC2P1-201ENST00000423940 420 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms