Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 PWAR6-201ENST00000552334 4618 ntBASIC3.45□□□□□ -1.86
TNFSF9P41273 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
TNFSF9P41273 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.45□□□□□ -1.86
TNFSF9P41273 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
TNFSF9P41273 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
TNFSF9P41273 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
TNFSF9P41273 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.44□□□□□ -1.86
TNFSF9P41273 RAD1P1-201ENST00000231383 813 ntBASIC3.44□□□□□ -1.86
TNFSF9P41273 METTL21EP-201ENST00000298105 713 ntBASIC3.44□□□□□ -1.86
TNFSF9P41273 SNORA48.5-201ENST00000391143 135 ntBASIC3.44□□□□□ -1.86
TNFSF9P41273 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.44□□□□□ -1.86
TNFSF9P41273 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.44□□□□□ -1.86
TNFSF9P41273 GSTA8P-201ENST00000404253 637 ntBASIC3.44□□□□□ -1.86
TNFSF9P41273 AMD1P2-201ENST00000412936 992 ntBASIC3.44□□□□□ -1.86
TNFSF9P41273 XKRYP4-201ENST00000414395 483 ntBASIC3.44□□□□□ -1.86
TNFSF9P41273 RPL7P44-201ENST00000424827 742 ntBASIC3.44□□□□□ -1.86
TNFSF9P41273 FAR1P1-201ENST00000427163 934 ntBASIC3.44□□□□□ -1.86
TNFSF9P41273 RPL23AP69-201ENST00000431134 458 ntBASIC3.44□□□□□ -1.86
TNFSF9P41273 AC006994.1-201ENST00000438212 839 ntBASIC3.44□□□□□ -1.86
TNFSF9P41273 RSL24D1P2-201ENST00000445584 366 ntBASIC3.44□□□□□ -1.86
TNFSF9P41273 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.44□□□□□ -1.86
TNFSF9P41273 AL671855.1-201ENST00000446875 1203 ntBASIC3.44□□□□□ -1.86
TNFSF9P41273 XKRYP5-201ENST00000449659 483 ntBASIC3.44□□□□□ -1.86
TNFSF9P41273 AC004801.2-202ENST00000463559 283 ntBASIC3.44□□□□□ -1.86
TNFSF9P41273 AC087312.1-201ENST00000471411 480 ntBASIC3.44□□□□□ -1.86
TNFSF9P41273 RPL7P23-201ENST00000493874 747 ntBASIC3.44□□□□□ -1.86
TNFSF9P41273 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.44□□□□□ -1.86
TNFSF9P41273 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.44□□□□□ -1.86
TNFSF9P41273 RPL7L1P13-201ENST00000511702 739 ntBASIC3.44□□□□□ -1.86
TNFSF9P41273 RNA5SP309-201ENST00000516670 106 ntBASIC3.44□□□□□ -1.86
TNFSF9P41273 RN7SKP277-201ENST00000516895 283 ntBASIC3.44□□□□□ -1.86
TNFSF9P41273 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.44□□□□□ -1.86
TNFSF9P41273 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC3.44□□□□□ -1.86
TNFSF9P41273 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC3.44□□□□□ -1.86
TNFSF9P41273 AL592295.2-201ENST00000612578 206 ntBASIC3.44□□□□□ -1.86
TNFSF9P41273 AC138932.5-201ENST00000617759 563 ntBASIC3.44□□□□□ -1.86
TNFSF9P41273 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.44□□□□□ -1.86
TNFSF9P41273 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
TNFSF9P41273 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
TNFSF9P41273 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
TNFSF9P41273 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.43□□□□□ -1.86
TNFSF9P41273 RNU6-1293P-201ENST00000384077 107 ntBASIC3.43□□□□□ -1.86
TNFSF9P41273 AL024507.1-201ENST00000412741 274 ntBASIC3.43□□□□□ -1.86
TNFSF9P41273 AC007899.1-201ENST00000412776 775 ntBASIC3.43□□□□□ -1.86
TNFSF9P41273 NUP35P2-201ENST00000416748 943 ntBASIC3.43□□□□□ -1.86
TNFSF9P41273 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
TNFSF9P41273 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.43□□□□□ -1.86
TNFSF9P41273 RPS7P5-201ENST00000441482 581 ntBASIC3.43□□□□□ -1.86
TNFSF9P41273 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
TNFSF9P41273 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.43□□□□□ -1.86
TNFSF9P41273 RPL6P9-201ENST00000466502 859 ntBASIC3.43□□□□□ -1.86
TNFSF9P41273 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC3.43□□□□□ -1.86
TNFSF9P41273 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.43□□□□□ -1.86
TNFSF9P41273 AC023141.12-201ENST00000512399 199 ntBASIC3.43□□□□□ -1.86
TNFSF9P41273 RNU1-143P-201ENST00000516296 146 ntBASIC3.43□□□□□ -1.86
TNFSF9P41273 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.43□□□□□ -1.86
TNFSF9P41273 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.43□□□□□ -1.86
TNFSF9P41273 AP001636.2-201ENST00000525517 696 ntBASIC3.43□□□□□ -1.86
TNFSF9P41273 RFPL1S-203ENST00000539579 330 ntBASIC3.43□□□□□ -1.86
TNFSF9P41273 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.43□□□□□ -1.86
TNFSF9P41273 CENPUP2-201ENST00000555897 1186 ntBASIC3.43□□□□□ -1.86
TNFSF9P41273 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.43□□□□□ -1.86
TNFSF9P41273 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC3.43□□□□□ -1.86
TNFSF9P41273 NTAN1P1-201ENST00000603150 646 ntBASIC3.43□□□□□ -1.86
TNFSF9P41273 AC124312.4-201ENST00000605533 310 ntBASIC3.43□□□□□ -1.86
TNFSF9P41273 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.43□□□□□ -1.86
TNFSF9P41273 AL355802.4-201ENST00000607635 548 ntBASIC3.43□□□□□ -1.86
TNFSF9P41273 U1.23-201ENST00000610293 146 ntBASIC3.43□□□□□ -1.86
TNFSF9P41273 RNU1-68P-201ENST00000615382 146 ntBASIC3.43□□□□□ -1.86
TNFSF9P41273 U1.39-201ENST00000621562 146 ntBASIC3.43□□□□□ -1.86
TNFSF9P41273 RNU6-156P-201ENST00000621869 107 ntBASIC3.43□□□□□ -1.86
TNFSF9P41273 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.43□□□□□ -1.86
TNFSF9P41273 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.43□□□□□ -1.86
TNFSF9P41273 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
TNFSF9P41273 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.43□□□□□ -1.86
TNFSF9P41273 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
TNFSF9P41273 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
TNFSF9P41273 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
TNFSF9P41273 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
TNFSF9P41273 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
TNFSF9P41273 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
TNFSF9P41273 Y_RNA.111-201ENST00000363248 100 ntBASIC3.42□□□□□ -1.86
TNFSF9P41273 SNORD115-48-201ENST00000364764 76 ntBASIC3.42□□□□□ -1.86
TNFSF9P41273 SNORA7.4-201ENST00000384249 137 ntBASIC3.42□□□□□ -1.86
TNFSF9P41273 AL138878.1-201ENST00000405131 347 ntBASIC3.42□□□□□ -1.86
TNFSF9P41273 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.42□□□□□ -1.86
TNFSF9P41273 ISCA1P2-201ENST00000438679 421 ntBASIC3.42□□□□□ -1.86
TNFSF9P41273 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC3.42□□□□□ -1.86
TNFSF9P41273 HMGB1P48-201ENST00000446155 598 ntBASIC3.42□□□□□ -1.86
TNFSF9P41273 AC092685.1-201ENST00000447960 1243 ntBASIC3.42□□□□□ -1.86
TNFSF9P41273 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.42□□□□□ -1.86
TNFSF9P41273 MTND3P4-201ENST00000453537 303 ntBASIC3.42□□□□□ -1.86
TNFSF9P41273 RPL9P32-201ENST00000464118 620 ntBASIC3.42□□□□□ -1.86
TNFSF9P41273 AL136126.1-201ENST00000473603 402 ntBASIC3.42□□□□□ -1.86
TNFSF9P41273 RPS3AP43-201ENST00000479743 781 ntBASIC3.42□□□□□ -1.86
TNFSF9P41273 AC108078.3-201ENST00000502633 489 ntBASIC3.42□□□□□ -1.86
TNFSF9P41273 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.42□□□□□ -1.86
TNFSF9P41273 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
TNFSF9P41273 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC3.42□□□□□ -1.86
TNFSF9P41273 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 147.9 ms