Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 POU5F1P7-201ENST00000508759 541 ntBASIC5.35□□□□□ -1.55
CNGA1P29973 AC024589.1-201ENST00000512207 263 ntBASIC5.35□□□□□ -1.55
CNGA1P29973 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC5.35□□□□□ -1.55
CNGA1P29973 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC5.35□□□□□ -1.55
CNGA1P29973 SNORA31.9-201ENST00000516429 84 ntBASIC5.35□□□□□ -1.55
CNGA1P29973 Y_RNA.719-201ENST00000517156 106 ntBASIC5.35□□□□□ -1.55
CNGA1P29973 IGLVIV-53-201ENST00000520107 367 ntBASIC5.35□□□□□ -1.55
CNGA1P29973 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.35□□□□□ -1.55
CNGA1P29973 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.35□□□□□ -1.55
CNGA1P29973 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC5.35□□□□□ -1.55
CNGA1P29973 AC005868.1-201ENST00000536421 331 ntBASIC5.35□□□□□ -1.55
CNGA1P29973 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.35□□□□□ -1.55
CNGA1P29973 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC5.35□□□□□ -1.55
CNGA1P29973 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC5.35□□□□□ -1.55
CNGA1P29973 AC119751.7-201ENST00000600494 245 ntBASIC5.35□□□□□ -1.55
CNGA1P29973 AC146944.4-201ENST00000602697 718 ntBASIC5.35□□□□□ -1.55
CNGA1P29973 AP000403.1-201ENST00000603349 851 ntBASIC5.35□□□□□ -1.55
CNGA1P29973 AC112187.2-201ENST00000604345 283 ntBASIC5.35□□□□□ -1.55
CNGA1P29973 AC024941.1-201ENST00000612250 334 ntBASIC5.35□□□□□ -1.55
CNGA1P29973 AL133243.1-201ENST00000614487 366 ntBASIC5.35□□□□□ -1.55
CNGA1P29973 AC004009.2-201ENST00000623016 728 ntBASIC5.35□□□□□ -1.55
CNGA1P29973 AC090582.1-201ENST00000636321 199 ntBASIC5.35□□□□□ -1.55
CNGA1P29973 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
CNGA1P29973 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CNGA1P29973 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
CNGA1P29973 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CNGA1P29973 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.34□□□□□ -1.55
CNGA1P29973 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC5.34□□□□□ -1.55
CNGA1P29973 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.34□□□□□ -1.55
CNGA1P29973 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CNGA1P29973 IQCB2P-201ENST00000401788 1633 ntBASIC5.34□□□□□ -1.55
CNGA1P29973 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CNGA1P29973 PABPC1P7-201ENST00000413177 1513 ntBASIC5.34□□□□□ -1.55
CNGA1P29973 ZNF734P-201ENST00000419494 1534 ntBASIC5.34□□□□□ -1.55
CNGA1P29973 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CNGA1P29973 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC5.34□□□□□ -1.55
CNGA1P29973 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
CNGA1P29973 Y_RNA.97-201ENST00000363094 102 ntBASIC5.34□□□□□ -1.55
CNGA1P29973 Y_RNA.194-201ENST00000363985 102 ntBASIC5.34□□□□□ -1.55
CNGA1P29973 RNU6-289P-201ENST00000364093 107 ntBASIC5.34□□□□□ -1.55
CNGA1P29973 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CNGA1P29973 TANK-206ENST00000406287 875 ntTSL 5 BASIC5.34□□□□□ -1.55
CNGA1P29973 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC5.34□□□□□ -1.55
CNGA1P29973 AC012065.2-201ENST00000421295 375 ntBASIC5.34□□□□□ -1.55
CNGA1P29973 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC5.34□□□□□ -1.55
CNGA1P29973 RPS27AP14-201ENST00000422868 454 ntBASIC5.34□□□□□ -1.55
CNGA1P29973 PSMA2P3-201ENST00000429685 675 ntBASIC5.34□□□□□ -1.55
CNGA1P29973 AC092162.1-201ENST00000432828 434 ntBASIC5.34□□□□□ -1.55
CNGA1P29973 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC5.34□□□□□ -1.55
CNGA1P29973 AC127537.2-201ENST00000439258 465 ntBASIC5.34□□□□□ -1.55
CNGA1P29973 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC5.34□□□□□ -1.55
CNGA1P29973 BTF3P6-201ENST00000448054 499 ntBASIC5.34□□□□□ -1.55
CNGA1P29973 AC005297.2-201ENST00000450430 606 ntBASIC5.34□□□□□ -1.55
CNGA1P29973 SNRPGP9-201ENST00000456025 225 ntBASIC5.34□□□□□ -1.55
CNGA1P29973 RPL21P126-201ENST00000470049 478 ntBASIC5.34□□□□□ -1.55
CNGA1P29973 AC022795.1-201ENST00000473808 480 ntBASIC5.34□□□□□ -1.55
CNGA1P29973 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC5.34□□□□□ -1.55
CNGA1P29973 AC021678.1-201ENST00000505195 936 ntBASIC5.34□□□□□ -1.55
CNGA1P29973 AC004069.2-201ENST00000505438 1114 ntBASIC5.34□□□□□ -1.55
CNGA1P29973 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC5.34□□□□□ -1.55
CNGA1P29973 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC5.34□□□□□ -1.55
CNGA1P29973 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC5.34□□□□□ -1.55
CNGA1P29973 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC5.34□□□□□ -1.55
CNGA1P29973 AC015795.1-201ENST00000513669 327 ntBASIC5.34□□□□□ -1.55
CNGA1P29973 AC005798.1-201ENST00000513715 387 ntBASIC5.34□□□□□ -1.55
CNGA1P29973 AP004247.1-201ENST00000531556 1289 ntBASIC5.34□□□□□ -1.55
CNGA1P29973 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC5.34□□□□□ -1.55
CNGA1P29973 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC5.34□□□□□ -1.55
CNGA1P29973 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC5.34□□□□□ -1.55
CNGA1P29973 AC091489.2-201ENST00000566263 604 ntBASIC5.34□□□□□ -1.55
CNGA1P29973 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC5.34□□□□□ -1.55
CNGA1P29973 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC5.34□□□□□ -1.55
CNGA1P29973 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC5.34□□□□□ -1.55
CNGA1P29973 BNIP3P33-201ENST00000598912 569 ntBASIC5.34□□□□□ -1.55
CNGA1P29973 VN1R85P-201ENST00000601587 426 ntBASIC5.34□□□□□ -1.55
CNGA1P29973 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC5.34□□□□□ -1.55
CNGA1P29973 AC008782.1-201ENST00000603386 430 ntBASIC5.34□□□□□ -1.55
CNGA1P29973 ACTR3BP1-201ENST00000605584 1247 ntBASIC5.34□□□□□ -1.55
CNGA1P29973 AC091979.2-201ENST00000607514 214 ntBASIC5.34□□□□□ -1.55
CNGA1P29973 AC097468.3-201ENST00000607956 456 ntBASIC5.34□□□□□ -1.55
CNGA1P29973 HULC.1-201ENST00000612720 240 ntBASIC5.34□□□□□ -1.55
CNGA1P29973 AC009878.1-201ENST00000621819 340 ntBASIC5.34□□□□□ -1.55
CNGA1P29973 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC5.34□□□□□ -1.55
CNGA1P29973 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CNGA1P29973 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CNGA1P29973 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.34□□□□□ -1.55
CNGA1P29973 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
CNGA1P29973 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC5.34□□□□□ -1.56
CNGA1P29973 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.34□□□□□ -1.56
CNGA1P29973 AC108467.2-201ENST00000617640 1597 ntBASIC5.33□□□□□ -1.56
CNGA1P29973 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.33□□□□□ -1.56
CNGA1P29973 AC009643.2-201ENST00000603543 1448 ntBASIC5.33□□□□□ -1.56
CNGA1P29973 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CNGA1P29973 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC5.33□□□□□ -1.56
CNGA1P29973 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
CNGA1P29973 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.33□□□□□ -1.56
CNGA1P29973 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CNGA1P29973 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CNGA1P29973 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CNGA1P29973 RNU5F-6P-201ENST00000362979 116 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms