Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 SUMO2P20-201ENST00000520803 283 ntBASIC3.86□□□□□ -1.79
HLA-DPA1P20036 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.86□□□□□ -1.79
HLA-DPA1P20036 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.86□□□□□ -1.79
HLA-DPA1P20036 AC087894.1-201ENST00000538359 518 ntBASIC3.86□□□□□ -1.79
HLA-DPA1P20036 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.86□□□□□ -1.79
HLA-DPA1P20036 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.86□□□□□ -1.79
HLA-DPA1P20036 CYCSP30-201ENST00000546447 172 ntBASIC3.86□□□□□ -1.79
HLA-DPA1P20036 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC3.86□□□□□ -1.79
HLA-DPA1P20036 AC091515.1-201ENST00000548110 679 ntBASIC3.86□□□□□ -1.79
HLA-DPA1P20036 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.86□□□□□ -1.79
HLA-DPA1P20036 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.86□□□□□ -1.79
HLA-DPA1P20036 RN7SL703P-201ENST00000578485 302 ntBASIC3.86□□□□□ -1.79
HLA-DPA1P20036 VN1R87P-201ENST00000596706 487 ntBASIC3.86□□□□□ -1.79
HLA-DPA1P20036 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HLA-DPA1P20036 AL391261.4-201ENST00000616012 481 ntBASIC3.86□□□□□ -1.79
HLA-DPA1P20036 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.86□□□□□ -1.79
HLA-DPA1P20036 AC009318.4-201ENST00000620496 486 ntBASIC3.86□□□□□ -1.79
HLA-DPA1P20036 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.86□□□□□ -1.79
HLA-DPA1P20036 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HLA-DPA1P20036 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HLA-DPA1P20036 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HLA-DPA1P20036 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
HLA-DPA1P20036 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.86□□□□□ -1.79
HLA-DPA1P20036 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HLA-DPA1P20036 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HLA-DPA1P20036 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.86□□□□□ -1.79
HLA-DPA1P20036 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
HLA-DPA1P20036 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
HLA-DPA1P20036 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
HLA-DPA1P20036 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
HLA-DPA1P20036 U1.1-201ENST00000384101 164 ntBASIC3.85□□□□□ -1.79
HLA-DPA1P20036 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
HLA-DPA1P20036 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.85□□□□□ -1.79
HLA-DPA1P20036 AL445189.1-201ENST00000405722 338 ntBASIC3.85□□□□□ -1.79
HLA-DPA1P20036 SNORA3.3-201ENST00000408712 125 ntBASIC3.85□□□□□ -1.79
HLA-DPA1P20036 RPS7P15-201ENST00000415804 584 ntBASIC3.85□□□□□ -1.79
HLA-DPA1P20036 AC027644.1-201ENST00000419595 298 ntBASIC3.85□□□□□ -1.79
HLA-DPA1P20036 AC013262.1-201ENST00000426710 252 ntBASIC3.85□□□□□ -1.79
HLA-DPA1P20036 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.85□□□□□ -1.79
HLA-DPA1P20036 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC3.85□□□□□ -1.79
HLA-DPA1P20036 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.85□□□□□ -1.79
HLA-DPA1P20036 AF228730.2-201ENST00000438784 848 ntBASIC3.85□□□□□ -1.79
HLA-DPA1P20036 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.85□□□□□ -1.79
HLA-DPA1P20036 RPS20P24-201ENST00000457473 361 ntBASIC3.85□□□□□ -1.79
HLA-DPA1P20036 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.85□□□□□ -1.79
HLA-DPA1P20036 RN7SL132P-201ENST00000478131 296 ntBASIC3.85□□□□□ -1.79
HLA-DPA1P20036 AC093801.2-201ENST00000503966 1050 ntBASIC3.85□□□□□ -1.79
HLA-DPA1P20036 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.85□□□□□ -1.79
HLA-DPA1P20036 AC093767.1-201ENST00000504523 156 ntBASIC3.85□□□□□ -1.79
HLA-DPA1P20036 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.85□□□□□ -1.79
HLA-DPA1P20036 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.85□□□□□ -1.79
HLA-DPA1P20036 AP001317.1-201ENST00000531194 960 ntBASIC3.85□□□□□ -1.79
HLA-DPA1P20036 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.85□□□□□ -1.79
HLA-DPA1P20036 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.85□□□□□ -1.79
HLA-DPA1P20036 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.85□□□□□ -1.79
HLA-DPA1P20036 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.85□□□□□ -1.79
HLA-DPA1P20036 MIR486-1-201ENST00000612171 68 ntBASIC3.85□□□□□ -1.79
HLA-DPA1P20036 U6.98-201ENST00000637157 84 ntBASIC3.85□□□□□ -1.79
HLA-DPA1P20036 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
HLA-DPA1P20036 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
HLA-DPA1P20036 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
HLA-DPA1P20036 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
HLA-DPA1P20036 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.84□□□□□ -1.79
HLA-DPA1P20036 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.84□□□□□ -1.79
HLA-DPA1P20036 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
HLA-DPA1P20036 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
HLA-DPA1P20036 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC3.84□□□□□ -1.79
HLA-DPA1P20036 AIMP1P1-201ENST00000418670 937 ntBASIC3.84□□□□□ -1.79
HLA-DPA1P20036 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
HLA-DPA1P20036 AC017083.1-201ENST00000428093 483 ntBASIC3.84□□□□□ -1.79
HLA-DPA1P20036 HMGB3P5-201ENST00000428894 612 ntBASIC3.84□□□□□ -1.79
HLA-DPA1P20036 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.84□□□□□ -1.79
HLA-DPA1P20036 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.84□□□□□ -1.79
HLA-DPA1P20036 DNAJC19P1-201ENST00000455312 319 ntBASIC3.84□□□□□ -1.79
HLA-DPA1P20036 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.84□□□□□ -1.79
HLA-DPA1P20036 PLGLA-201ENST00000465668 449 ntBASIC3.84□□□□□ -1.79
HLA-DPA1P20036 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.84□□□□□ -1.79
HLA-DPA1P20036 RN7SL323P-201ENST00000494712 295 ntBASIC3.84□□□□□ -1.79
HLA-DPA1P20036 DYNLL1P6-201ENST00000503440 264 ntBASIC3.84□□□□□ -1.79
HLA-DPA1P20036 AC026414.1-201ENST00000504046 698 ntBASIC3.84□□□□□ -1.79
HLA-DPA1P20036 AC016550.1-201ENST00000505348 785 ntBASIC3.84□□□□□ -1.79
HLA-DPA1P20036 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
HLA-DPA1P20036 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.84□□□□□ -1.79
HLA-DPA1P20036 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.84□□□□□ -1.79
HLA-DPA1P20036 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.84□□□□□ -1.79
HLA-DPA1P20036 SULT1C2P1-202ENST00000562418 459 ntBASIC3.84□□□□□ -1.79
HLA-DPA1P20036 AL360157.1-201ENST00000565962 87 ntBASIC3.84□□□□□ -1.79
HLA-DPA1P20036 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.84□□□□□ -1.79
HLA-DPA1P20036 AC023825.1-201ENST00000566704 1030 ntBASIC3.84□□□□□ -1.79
HLA-DPA1P20036 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.84□□□□□ -1.79
HLA-DPA1P20036 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.84□□□□□ -1.79
HLA-DPA1P20036 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC3.84□□□□□ -1.79
HLA-DPA1P20036 AC090912.3-201ENST00000609775 533 ntBASIC3.84□□□□□ -1.79
HLA-DPA1P20036 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.84□□□□□ -1.79
HLA-DPA1P20036 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.84□□□□□ -1.79
HLA-DPA1P20036 AC116096.1-201ENST00000566804 2314 ntBASIC3.84□□□□□ -1.79
HLA-DPA1P20036 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
HLA-DPA1P20036 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
HLA-DPA1P20036 AC007256.1-201ENST00000392253 2765 ntBASIC3.84□□□□□ -1.8
HLA-DPA1P20036 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.84□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms