Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 MIR153-1-201ENST00000384914 90 ntBASIC6.08□□□□□ -1.44
ERCC3P19447 RPL7P57-201ENST00000423238 740 ntBASIC6.08□□□□□ -1.44
ERCC3P19447 LAMTOR3P1-201ENST00000428620 370 ntBASIC6.08□□□□□ -1.44
ERCC3P19447 TIMM9P3-201ENST00000428659 274 ntBASIC6.08□□□□□ -1.44
ERCC3P19447 RPS27AP12-201ENST00000429552 465 ntBASIC6.08□□□□□ -1.44
ERCC3P19447 MTCO2P11-201ENST00000431069 680 ntBASIC6.08□□□□□ -1.44
ERCC3P19447 TEX41-206ENST00000432608 661 ntTSL 3 BASIC6.08□□□□□ -1.44
ERCC3P19447 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC6.08□□□□□ -1.44
ERCC3P19447 AC122718.1-201ENST00000439448 744 ntBASIC6.08□□□□□ -1.44
ERCC3P19447 NFU1P2-201ENST00000448700 469 ntBASIC6.08□□□□□ -1.44
ERCC3P19447 FGF7P6-202ENST00000451282 293 ntBASIC6.08□□□□□ -1.44
ERCC3P19447 AC104308.1-201ENST00000454621 333 ntBASIC6.08□□□□□ -1.44
ERCC3P19447 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC6.08□□□□□ -1.44
ERCC3P19447 FAM133DP-201ENST00000464802 691 ntBASIC6.08□□□□□ -1.44
ERCC3P19447 RN7SL860P-201ENST00000473738 223 ntBASIC6.08□□□□□ -1.44
ERCC3P19447 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC6.08□□□□□ -1.44
ERCC3P19447 AC055855.1-201ENST00000489563 579 ntBASIC6.08□□□□□ -1.44
ERCC3P19447 AC079382.1-201ENST00000493346 557 ntBASIC6.08□□□□□ -1.44
ERCC3P19447 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC6.08□□□□□ -1.44
ERCC3P19447 AC114967.1-201ENST00000504890 259 ntBASIC6.08□□□□□ -1.44
ERCC3P19447 Y_RNA.704-201ENST00000516851 102 ntBASIC6.08□□□□□ -1.44
ERCC3P19447 IGHVII-44-2-201ENST00000517728 250 ntBASIC6.08□□□□□ -1.44
ERCC3P19447 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC6.08□□□□□ -1.44
ERCC3P19447 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC6.08□□□□□ -1.44
ERCC3P19447 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC6.08□□□□□ -1.44
ERCC3P19447 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC6.08□□□□□ -1.44
ERCC3P19447 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC6.08□□□□□ -1.44
ERCC3P19447 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC6.08□□□□□ -1.44
ERCC3P19447 UBE2L4-201ENST00000587688 464 ntBASIC6.08□□□□□ -1.44
ERCC3P19447 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC6.08□□□□□ -1.44
ERCC3P19447 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC6.08□□□□□ -1.44
ERCC3P19447 AC011451.2-201ENST00000604303 598 ntBASIC6.08□□□□□ -1.44
ERCC3P19447 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
ERCC3P19447 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC6.08□□□□□ -1.44
ERCC3P19447 AL355073.2-201ENST00000612106 557 ntBASIC6.08□□□□□ -1.44
ERCC3P19447 AL158801.5-201ENST00000623123 465 ntBASIC6.08□□□□□ -1.44
ERCC3P19447 MIR3688-2-201ENST00000636963 87 ntBASIC6.08□□□□□ -1.44
ERCC3P19447 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
ERCC3P19447 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
ERCC3P19447 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC6.08□□□□□ -1.44
ERCC3P19447 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
ERCC3P19447 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC6.08□□□□□ -1.44
ERCC3P19447 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC6.08□□□□□ -1.44
ERCC3P19447 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
ERCC3P19447 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
ERCC3P19447 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
ERCC3P19447 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
ERCC3P19447 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC6.07□□□□□ -1.44
ERCC3P19447 CIR1P3-201ENST00000405137 479 ntBASIC6.07□□□□□ -1.44
ERCC3P19447 MIR1277-201ENST00000408536 78 ntBASIC6.07□□□□□ -1.44
ERCC3P19447 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC6.07□□□□□ -1.44
ERCC3P19447 CKS1BP5-201ENST00000434172 273 ntBASIC6.07□□□□□ -1.44
ERCC3P19447 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC6.07□□□□□ -1.44
ERCC3P19447 MED28P3-201ENST00000444288 531 ntBASIC6.07□□□□□ -1.44
ERCC3P19447 CEACAMP6-201ENST00000452007 574 ntBASIC6.07□□□□□ -1.44
ERCC3P19447 AC007686.1-201ENST00000488511 463 ntBASIC6.07□□□□□ -1.44
ERCC3P19447 OR5AQ1P-201ENST00000527596 927 ntBASIC6.07□□□□□ -1.44
ERCC3P19447 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC6.07□□□□□ -1.44
ERCC3P19447 OR8L1P-201ENST00000534005 955 ntBASIC6.07□□□□□ -1.44
ERCC3P19447 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC6.07□□□□□ -1.44
ERCC3P19447 BGLT3-201ENST00000564523 994 ntBASIC6.07□□□□□ -1.44
ERCC3P19447 AP003117.2-201ENST00000606010 545 ntBASIC6.07□□□□□ -1.44
ERCC3P19447 AC012150.2-201ENST00000621300 544 ntBASIC6.07□□□□□ -1.44
ERCC3P19447 NEK3-211ENST00000629912 141 ntTSL 5 BASIC6.07□□□□□ -1.44
ERCC3P19447 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC6.07□□□□□ -1.44
ERCC3P19447 THAP12P4-201ENST00000528321 2266 ntBASIC6.07□□□□□ -1.44
ERCC3P19447 INTS6P1-201ENST00000504674 2530 ntBASIC6.07□□□□□ -1.44
ERCC3P19447 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
ERCC3P19447 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
ERCC3P19447 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
ERCC3P19447 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
ERCC3P19447 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC6.07□□□□□ -1.44
ERCC3P19447 SAGE4P-201ENST00000442271 3381 ntBASIC6.07□□□□□ -1.44
ERCC3P19447 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
ERCC3P19447 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
ERCC3P19447 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
ERCC3P19447 AC092747.4-201ENST00000620519 1861 ntBASIC6.07□□□□□ -1.44
ERCC3P19447 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC6.06□□□□□ -1.44
ERCC3P19447 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
ERCC3P19447 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
ERCC3P19447 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
ERCC3P19447 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC6.06□□□□□ -1.44
ERCC3P19447 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
ERCC3P19447 RNU6-1085P-201ENST00000363576 107 ntBASIC6.06□□□□□ -1.44
ERCC3P19447 RNU6-1090P-201ENST00000364065 94 ntBASIC6.06□□□□□ -1.44
ERCC3P19447 RNU6-359P-201ENST00000365466 108 ntBASIC6.06□□□□□ -1.44
ERCC3P19447 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC6.06□□□□□ -1.44
ERCC3P19447 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
ERCC3P19447 Y_RNA.402-201ENST00000383972 102 ntBASIC6.06□□□□□ -1.44
ERCC3P19447 SNORD51-201ENST00000384320 80 ntBASIC6.06□□□□□ -1.44
ERCC3P19447 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
ERCC3P19447 RNU2-47P-201ENST00000410649 186 ntBASIC6.06□□□□□ -1.44
ERCC3P19447 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC6.06□□□□□ -1.44
ERCC3P19447 AC005517.2-201ENST00000424673 553 ntBASIC6.06□□□□□ -1.44
ERCC3P19447 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC6.06□□□□□ -1.44
ERCC3P19447 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
ERCC3P19447 AL662791.1-201ENST00000441992 928 ntBASIC6.06□□□□□ -1.44
ERCC3P19447 RPS4XP4-201ENST00000443195 763 ntBASIC6.06□□□□□ -1.44
ERCC3P19447 RAC1P7-201ENST00000445367 377 ntBASIC6.06□□□□□ -1.44
ERCC3P19447 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms