Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 AL162739.1-201ENST00000450606 307 ntBASIC5.62□□□□□ -1.51
NID1P14543 AC108059.3-201ENST00000456388 214 ntBASIC5.62□□□□□ -1.51
NID1P14543 MED28P2-201ENST00000475771 317 ntBASIC5.62□□□□□ -1.51
NID1P14543 RPL23AP40-201ENST00000487630 390 ntBASIC5.62□□□□□ -1.51
NID1P14543 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NID1P14543 AC010350.1-201ENST00000504908 231 ntBASIC5.62□□□□□ -1.51
NID1P14543 AC022493.2-201ENST00000506122 481 ntBASIC5.62□□□□□ -1.51
NID1P14543 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.62□□□□□ -1.51
NID1P14543 EIF3KP3-201ENST00000514461 639 ntBASIC5.62□□□□□ -1.51
NID1P14543 RNU6-189P-201ENST00000516120 101 ntBASIC5.62□□□□□ -1.51
NID1P14543 RNA5SP434-201ENST00000516647 121 ntBASIC5.62□□□□□ -1.51
NID1P14543 AP003385.6-201ENST00000531603 374 ntBASIC5.62□□□□□ -1.51
NID1P14543 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NID1P14543 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC5.62□□□□□ -1.51
NID1P14543 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC5.62□□□□□ -1.51
NID1P14543 AL049779.3-201ENST00000557141 606 ntBASIC5.62□□□□□ -1.51
NID1P14543 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC5.62□□□□□ -1.51
NID1P14543 MIR3910-1-201ENST00000580936 111 ntBASIC5.62□□□□□ -1.51
NID1P14543 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC5.62□□□□□ -1.51
NID1P14543 AL138895.2-201ENST00000603019 178 ntBASIC5.62□□□□□ -1.51
NID1P14543 AP001486.3-201ENST00000615334 372 ntBASIC5.62□□□□□ -1.51
NID1P14543 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.62□□□□□ -1.51
NID1P14543 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.62□□□□□ -1.51
NID1P14543 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
NID1P14543 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.62□□□□□ -1.51
NID1P14543 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
NID1P14543 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC5.62□□□□□ -1.51
NID1P14543 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.62□□□□□ -1.51
NID1P14543 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
NID1P14543 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NID1P14543 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.62□□□□□ -1.51
NID1P14543 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NID1P14543 AC022164.1-201ENST00000568767 2673 ntBASIC5.61□□□□□ -1.51
NID1P14543 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
NID1P14543 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
NID1P14543 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
NID1P14543 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
NID1P14543 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
NID1P14543 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NID1P14543 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
NID1P14543 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NID1P14543 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NID1P14543 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
NID1P14543 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NID1P14543 Y_RNA.14-201ENST00000362415 103 ntBASIC5.61□□□□□ -1.51
NID1P14543 SNORD1C-201ENST00000363315 78 ntBASIC5.61□□□□□ -1.51
NID1P14543 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NID1P14543 GNG5P2-201ENST00000372054 207 ntBASIC5.61□□□□□ -1.51
NID1P14543 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
NID1P14543 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
NID1P14543 Y_RNA.485-201ENST00000384395 102 ntBASIC5.61□□□□□ -1.51
NID1P14543 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
NID1P14543 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
NID1P14543 AL359643.1-201ENST00000404109 423 ntBASIC5.61□□□□□ -1.51
NID1P14543 RNA5SP156-201ENST00000410250 110 ntBASIC5.61□□□□□ -1.51
NID1P14543 Y_RNA.594-201ENST00000410373 140 ntBASIC5.61□□□□□ -1.51
NID1P14543 RNU2-38P-201ENST00000410856 79 ntBASIC5.61□□□□□ -1.51
NID1P14543 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC5.61□□□□□ -1.51
NID1P14543 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC5.61□□□□□ -1.51
NID1P14543 AC236972.1-201ENST00000433225 199 ntBASIC5.61□□□□□ -1.51
NID1P14543 RPS17P8-201ENST00000434525 335 ntBASIC5.61□□□□□ -1.51
NID1P14543 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.61□□□□□ -1.51
NID1P14543 AC105399.1-202ENST00000447303 205 ntBASIC5.61□□□□□ -1.51
NID1P14543 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC5.61□□□□□ -1.51
NID1P14543 AC103987.1-201ENST00000473394 348 ntBASIC5.61□□□□□ -1.51
NID1P14543 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.61□□□□□ -1.51
NID1P14543 AC025465.3-201ENST00000510570 311 ntBASIC5.61□□□□□ -1.51
NID1P14543 MTCO1P24-201ENST00000515438 1558 ntBASIC5.61□□□□□ -1.51
NID1P14543 RNU1-54P-201ENST00000517181 120 ntBASIC5.61□□□□□ -1.51
NID1P14543 SOD1P3-201ENST00000518682 454 ntBASIC5.61□□□□□ -1.51
NID1P14543 IGHV3-76-201ENST00000522465 295 ntBASIC5.61□□□□□ -1.51
NID1P14543 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC5.61□□□□□ -1.51
NID1P14543 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC5.61□□□□□ -1.51
NID1P14543 CASP1-212ENST00000531166 300 ntTSL 5 BASIC5.61□□□□□ -1.51
NID1P14543 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.61□□□□□ -1.51
NID1P14543 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.61□□□□□ -1.51
NID1P14543 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.61□□□□□ -1.51
NID1P14543 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
NID1P14543 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.61□□□□□ -1.51
NID1P14543 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.61□□□□□ -1.51
NID1P14543 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.61□□□□□ -1.51
NID1P14543 IGHV3-29-201ENST00000604817 344 ntBASIC5.61□□□□□ -1.51
NID1P14543 RPSAP75-201ENST00000605848 301 ntBASIC5.61□□□□□ -1.51
NID1P14543 AC010424.2-201ENST00000607594 443 ntBASIC5.61□□□□□ -1.51
NID1P14543 AC245517.5-201ENST00000611529 162 ntBASIC5.61□□□□□ -1.51
NID1P14543 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC5.61□□□□□ -1.51
NID1P14543 AC103705.1-201ENST00000619013 241 ntBASIC5.61□□□□□ -1.51
NID1P14543 AC103858.2-201ENST00000621471 543 ntBASIC5.61□□□□□ -1.51
NID1P14543 AP000843.1-201ENST00000624880 701 ntBASIC5.61□□□□□ -1.51
NID1P14543 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.61□□□□□ -1.51
NID1P14543 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.61□□□□□ -1.51
NID1P14543 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.61□□□□□ -1.51
NID1P14543 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
NID1P14543 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
NID1P14543 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NID1P14543 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.61□□□□□ -1.51
NID1P14543 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
NID1P14543 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NID1P14543 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
NID1P14543 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms