Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HLA-DOAP06340 SCN1A-220ENST00000641603 12506 ntBASIC5.01□□□□□ -1.61
HLA-DOAP06340 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
HLA-DOAP06340 RNA5SP130-201ENST00000364431 114 ntBASIC5.01□□□□□ -1.61
HLA-DOAP06340 ESD-201ENST00000378697 1079 ntTSL 5 BASIC5.01□□□□□ -1.61
HLA-DOAP06340 RNU6-1300P-201ENST00000391046 108 ntBASIC5.01□□□□□ -1.61
HLA-DOAP06340 ENSAP1-201ENST00000392855 326 ntBASIC5.01□□□□□ -1.61
HLA-DOAP06340 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC5.01□□□□□ -1.61
HLA-DOAP06340 AC009237.10-201ENST00000414112 510 ntBASIC5.01□□□□□ -1.61
HLA-DOAP06340 MTCYBP38-201ENST00000417160 1123 ntBASIC5.01□□□□□ -1.61
HLA-DOAP06340 SETP9-201ENST00000423837 832 ntBASIC5.01□□□□□ -1.61
HLA-DOAP06340 AL158073.1-201ENST00000426848 1104 ntBASIC5.01□□□□□ -1.61
HLA-DOAP06340 BLOC1S2P1-201ENST00000428431 301 ntBASIC5.01□□□□□ -1.61
HLA-DOAP06340 AL117339.2-201ENST00000430475 180 ntBASIC5.01□□□□□ -1.61
HLA-DOAP06340 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
HLA-DOAP06340 CBX1P4-201ENST00000439415 457 ntBASIC5.01□□□□□ -1.61
HLA-DOAP06340 AL671855.1-201ENST00000446875 1203 ntBASIC5.01□□□□□ -1.61
HLA-DOAP06340 RPL7P59-201ENST00000447700 943 ntBASIC5.01□□□□□ -1.61
HLA-DOAP06340 AL133244.1-201ENST00000456007 258 ntBASIC5.01□□□□□ -1.61
HLA-DOAP06340 AC015724.1-201ENST00000478577 156 ntBASIC5.01□□□□□ -1.61
HLA-DOAP06340 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.01□□□□□ -1.61
HLA-DOAP06340 AC048346.1-201ENST00000510247 144 ntBASIC5.01□□□□□ -1.61
HLA-DOAP06340 RNU6-718P-201ENST00000516166 105 ntBASIC5.01□□□□□ -1.61
HLA-DOAP06340 RNU6-885P-201ENST00000516607 104 ntBASIC5.01□□□□□ -1.61
HLA-DOAP06340 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC5.01□□□□□ -1.61
HLA-DOAP06340 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC5.01□□□□□ -1.61
HLA-DOAP06340 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC5.01□□□□□ -1.61
HLA-DOAP06340 AC004217.3-201ENST00000551552 878 ntBASIC5.01□□□□□ -1.61
HLA-DOAP06340 AC009063.1-201ENST00000563342 702 ntBASIC5.01□□□□□ -1.61
HLA-DOAP06340 AC106785.1-201ENST00000565935 262 ntBASIC5.01□□□□□ -1.61
HLA-DOAP06340 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC5.01□□□□□ -1.61
HLA-DOAP06340 MTCO3P24-201ENST00000572729 782 ntBASIC5.01□□□□□ -1.61
HLA-DOAP06340 AC012065.4-201ENST00000602445 679 ntBASIC5.01□□□□□ -1.61
HLA-DOAP06340 AC011451.2-201ENST00000604303 598 ntBASIC5.01□□□□□ -1.61
HLA-DOAP06340 U6.42-201ENST00000618440 107 ntBASIC5.01□□□□□ -1.61
HLA-DOAP06340 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC5.01□□□□□ -1.61
HLA-DOAP06340 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC5.01□□□□□ -1.61
HLA-DOAP06340 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HLA-DOAP06340 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC5.01□□□□□ -1.61
HLA-DOAP06340 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.01□□□□□ -1.61
HLA-DOAP06340 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.01□□□□□ -1.61
HLA-DOAP06340 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
HLA-DOAP06340 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC5.01□□□□□ -1.61
HLA-DOAP06340 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
HLA-DOAP06340 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC5.01□□□□□ -1.61
HLA-DOAP06340 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HLA-DOAP06340 IQCB2P-201ENST00000401788 1633 ntBASIC5.01□□□□□ -1.61
HLA-DOAP06340 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HLA-DOAP06340 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
HLA-DOAP06340 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
HLA-DOAP06340 EEF1A1P42-201ENST00000613436 1331 ntBASIC5□□□□□ -1.61
HLA-DOAP06340 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC5□□□□□ -1.61
HLA-DOAP06340 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC5□□□□□ -1.61
HLA-DOAP06340 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC5□□□□□ -1.61
HLA-DOAP06340 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HLA-DOAP06340 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5□□□□□ -1.61
HLA-DOAP06340 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5□□□□□ -1.61
HLA-DOAP06340 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC5□□□□□ -1.61
HLA-DOAP06340 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC5□□□□□ -1.61
HLA-DOAP06340 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC5□□□□□ -1.61
HLA-DOAP06340 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
HLA-DOAP06340 RNU6-839P-201ENST00000363347 108 ntBASIC5□□□□□ -1.61
HLA-DOAP06340 Y_RNA.390-201ENST00000383932 102 ntBASIC5□□□□□ -1.61
HLA-DOAP06340 SNORA37-201ENST00000384504 129 ntBASIC5□□□□□ -1.61
HLA-DOAP06340 SNORD66.1-201ENST00000391230 76 ntBASIC5□□□□□ -1.61
HLA-DOAP06340 AL590290.1-201ENST00000405336 380 ntBASIC5□□□□□ -1.61
HLA-DOAP06340 MIR1179-201ENST00000408703 91 ntBASIC5□□□□□ -1.61
HLA-DOAP06340 UBTFL3-201ENST00000418934 1024 ntBASIC5□□□□□ -1.61
HLA-DOAP06340 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC5□□□□□ -1.61
HLA-DOAP06340 EIF1P1-201ENST00000421436 341 ntBASIC5□□□□□ -1.61
HLA-DOAP06340 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC5□□□□□ -1.61
HLA-DOAP06340 OFD1P12Y-201ENST00000427963 1207 ntBASIC5□□□□□ -1.61
HLA-DOAP06340 RPL31P54-201ENST00000429803 370 ntBASIC5□□□□□ -1.61
HLA-DOAP06340 RPL7P4-203ENST00000430239 730 ntBASIC5□□□□□ -1.61
HLA-DOAP06340 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC5□□□□□ -1.61
HLA-DOAP06340 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC5□□□□□ -1.61
HLA-DOAP06340 AL035551.1-201ENST00000446931 348 ntBASIC5□□□□□ -1.61
HLA-DOAP06340 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC5□□□□□ -1.61
HLA-DOAP06340 PNPLA4P1-201ENST00000458328 305 ntBASIC5□□□□□ -1.61
HLA-DOAP06340 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5□□□□□ -1.61
HLA-DOAP06340 RNA5SP246-201ENST00000458909 119 ntBASIC5□□□□□ -1.61
HLA-DOAP06340 UBTFL6-201ENST00000477929 1024 ntBASIC5□□□□□ -1.61
HLA-DOAP06340 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC5□□□□□ -1.61
HLA-DOAP06340 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
HLA-DOAP06340 AF213884.1-201ENST00000488102 463 ntBASIC5□□□□□ -1.61
HLA-DOAP06340 RN7SL604P-201ENST00000492589 296 ntBASIC5□□□□□ -1.61
HLA-DOAP06340 AC116353.2-201ENST00000505332 712 ntBASIC5□□□□□ -1.61
HLA-DOAP06340 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC5□□□□□ -1.61
HLA-DOAP06340 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC5□□□□□ -1.61
HLA-DOAP06340 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC5□□□□□ -1.61
HLA-DOAP06340 LY96-202ENST00000518893 430 ntTSL 3 BASIC5□□□□□ -1.61
HLA-DOAP06340 OR5AK1P-201ENST00000524837 922 ntBASIC5□□□□□ -1.61
HLA-DOAP06340 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC5□□□□□ -1.61
HLA-DOAP06340 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC5□□□□□ -1.61
HLA-DOAP06340 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC5□□□□□ -1.61
HLA-DOAP06340 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC5□□□□□ -1.61
HLA-DOAP06340 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC5□□□□□ -1.61
HLA-DOAP06340 AC009852.2-201ENST00000567898 485 ntBASIC5□□□□□ -1.61
HLA-DOAP06340 ANKRD36BP2-206ENST00000575193 1245 ntBASIC5□□□□□ -1.61
HLA-DOAP06340 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms