Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
SEMA3DO95025 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SEMA3DO95025 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.24□□□□□ -1.89
SEMA3DO95025 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.24□□□□□ -1.89
SEMA3DO95025 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SEMA3DO95025 AL049781.1-201ENST00000623195 3585 ntBASIC3.23□□□□□ -1.89
SEMA3DO95025 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SEMA3DO95025 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.23□□□□□ -1.89
SEMA3DO95025 RNU4-35P-201ENST00000362588 141 ntBASIC3.23□□□□□ -1.89
SEMA3DO95025 RNA5SP391-201ENST00000363456 119 ntBASIC3.23□□□□□ -1.89
SEMA3DO95025 AC234772.1-201ENST00000377927 937 ntBASIC3.23□□□□□ -1.89
SEMA3DO95025 MIR218-2-201ENST00000385006 110 ntBASIC3.23□□□□□ -1.89
SEMA3DO95025 TAF9BP2-201ENST00000400856 499 ntBASIC3.23□□□□□ -1.89
SEMA3DO95025 FABP12P1-201ENST00000401911 322 ntBASIC3.23□□□□□ -1.89
SEMA3DO95025 AL356968.1-201ENST00000416622 474 ntBASIC3.23□□□□□ -1.89
SEMA3DO95025 AC241520.1-201ENST00000422654 1099 ntBASIC3.23□□□□□ -1.89
SEMA3DO95025 GLRXP1-201ENST00000423261 334 ntBASIC3.23□□□□□ -1.89
SEMA3DO95025 GOT2P5-201ENST00000433995 546 ntBASIC3.23□□□□□ -1.89
SEMA3DO95025 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC3.23□□□□□ -1.89
SEMA3DO95025 FTH1P1-201ENST00000437933 532 ntBASIC3.23□□□□□ -1.89
SEMA3DO95025 HIGD1AP11-201ENST00000438361 280 ntBASIC3.23□□□□□ -1.89
SEMA3DO95025 HSPE1P28-201ENST00000443139 211 ntBASIC3.23□□□□□ -1.89
SEMA3DO95025 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.23□□□□□ -1.89
SEMA3DO95025 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.23□□□□□ -1.89
SEMA3DO95025 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.23□□□□□ -1.89
SEMA3DO95025 RPL37P3-201ENST00000456825 293 ntBASIC3.23□□□□□ -1.89
SEMA3DO95025 AC025181.1-201ENST00000477507 416 ntBASIC3.23□□□□□ -1.89
SEMA3DO95025 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.23□□□□□ -1.89
SEMA3DO95025 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.23□□□□□ -1.89
SEMA3DO95025 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.23□□□□□ -1.89
SEMA3DO95025 AC068657.1-201ENST00000520807 306 ntBASIC3.23□□□□□ -1.89
SEMA3DO95025 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.23□□□□□ -1.89
SEMA3DO95025 IGKV2D-19-201ENST00000523346 262 ntBASIC3.23□□□□□ -1.89
SEMA3DO95025 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.23□□□□□ -1.89
SEMA3DO95025 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.23□□□□□ -1.89
SEMA3DO95025 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.23□□□□□ -1.89
SEMA3DO95025 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.23□□□□□ -1.89
SEMA3DO95025 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.23□□□□□ -1.89
SEMA3DO95025 AC005951.1-201ENST00000576706 485 ntBASIC3.23□□□□□ -1.89
SEMA3DO95025 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.23□□□□□ -1.89
SEMA3DO95025 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.23□□□□□ -1.89
SEMA3DO95025 AL020997.2-201ENST00000602607 184 ntBASIC3.23□□□□□ -1.89
SEMA3DO95025 AC135178.6-201ENST00000605314 398 ntBASIC3.23□□□□□ -1.89
SEMA3DO95025 AC245389.2-201ENST00000616023 576 ntBASIC3.23□□□□□ -1.89
SEMA3DO95025 AC243756.2-201ENST00000618406 463 ntBASIC3.23□□□□□ -1.89
SEMA3DO95025 AC242843.1-201ENST00000618702 573 ntBASIC3.23□□□□□ -1.89
SEMA3DO95025 SNORD39.4-201ENST00000620099 78 ntBASIC3.23□□□□□ -1.89
SEMA3DO95025 AC034229.5-201ENST00000624258 185 ntBASIC3.23□□□□□ -1.89
SEMA3DO95025 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SEMA3DO95025 MIR4496-201ENST00000635896 61 ntBASIC3.23□□□□□ -1.89
SEMA3DO95025 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SEMA3DO95025 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SEMA3DO95025 FAM35CP-201ENST00000554755 2470 ntBASIC3.22□□□□□ -1.89
SEMA3DO95025 ZNF90P1-201ENST00000480493 1951 ntBASIC3.22□□□□□ -1.89
SEMA3DO95025 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
SEMA3DO95025 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
SEMA3DO95025 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SEMA3DO95025 MIR148B-201ENST00000362252 99 ntBASIC3.22□□□□□ -1.89
SEMA3DO95025 DYNLT3P1-201ENST00000378574 347 ntBASIC3.22□□□□□ -1.89
SEMA3DO95025 SAR1AP2-201ENST00000392696 594 ntBASIC3.22□□□□□ -1.89
SEMA3DO95025 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SEMA3DO95025 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.22□□□□□ -1.89
SEMA3DO95025 HMGB3P23-201ENST00000414981 585 ntBASIC3.22□□□□□ -1.89
SEMA3DO95025 AC093578.1-201ENST00000415219 368 ntBASIC3.22□□□□□ -1.89
SEMA3DO95025 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.22□□□□□ -1.89
SEMA3DO95025 AC012065.2-201ENST00000421295 375 ntBASIC3.22□□□□□ -1.89
SEMA3DO95025 AC012498.1-201ENST00000424037 437 ntBASIC3.22□□□□□ -1.89
SEMA3DO95025 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.22□□□□□ -1.89
SEMA3DO95025 BX890604.2-201ENST00000427883 474 ntBASIC3.22□□□□□ -1.89
SEMA3DO95025 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
SEMA3DO95025 RPL23AP33-201ENST00000442301 452 ntBASIC3.22□□□□□ -1.89
SEMA3DO95025 RPL21P133-201ENST00000443666 476 ntBASIC3.22□□□□□ -1.89
SEMA3DO95025 AC069540.1-201ENST00000446320 988 ntBASIC3.22□□□□□ -1.89
SEMA3DO95025 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.22□□□□□ -1.89
SEMA3DO95025 AC089999.1-201ENST00000460336 374 ntBASIC3.22□□□□□ -1.89
SEMA3DO95025 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC3.22□□□□□ -1.89
SEMA3DO95025 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.22□□□□□ -1.89
SEMA3DO95025 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.22□□□□□ -1.89
SEMA3DO95025 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SEMA3DO95025 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.22□□□□□ -1.89
SEMA3DO95025 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.22□□□□□ -1.89
SEMA3DO95025 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.22□□□□□ -1.89
SEMA3DO95025 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.22□□□□□ -1.89
SEMA3DO95025 RN7SKP244-201ENST00000516513 307 ntBASIC3.22□□□□□ -1.89
SEMA3DO95025 RNA5SP380-201ENST00000517190 98 ntBASIC3.22□□□□□ -1.89
SEMA3DO95025 MAL2-205ENST00000521048 575 ntTSL 4 BASIC3.22□□□□□ -1.89
SEMA3DO95025 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.22□□□□□ -1.89
SEMA3DO95025 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC3.22□□□□□ -1.89
SEMA3DO95025 CIR1P1-201ENST00000524055 1133 ntBASIC3.22□□□□□ -1.89
SEMA3DO95025 OR5B10P-201ENST00000532869 642 ntBASIC3.22□□□□□ -1.89
SEMA3DO95025 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3.22□□□□□ -1.89
SEMA3DO95025 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.22□□□□□ -1.89
SEMA3DO95025 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC3.22□□□□□ -1.89
SEMA3DO95025 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.22□□□□□ -1.89
SEMA3DO95025 AC018618.2-201ENST00000604770 446 ntBASIC3.22□□□□□ -1.89
SEMA3DO95025 AL450270.1-201ENST00000606160 391 ntBASIC3.22□□□□□ -1.89
SEMA3DO95025 AC011374.2-201ENST00000607135 526 ntBASIC3.22□□□□□ -1.89
SEMA3DO95025 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC3.22□□□□□ -1.89
SEMA3DO95025 AC127502.3-201ENST00000636170 1206 ntBASIC3.22□□□□□ -1.89
SEMA3DO95025 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms