Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AP002088.1-201ENST00000382740 395 ntBASIC3.74□□□□□ -1.81
SNX3O60493 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.74□□□□□ -1.81
SNX3O60493 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SNX3O60493 AL450338.1-201ENST00000407987 512 ntBASIC3.74□□□□□ -1.81
SNX3O60493 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.74□□□□□ -1.81
SNX3O60493 RNU4-25P-201ENST00000410569 230 ntBASIC3.74□□□□□ -1.81
SNX3O60493 AC068533.2-201ENST00000411872 306 ntBASIC3.74□□□□□ -1.81
SNX3O60493 OR5BE1P-201ENST00000425977 939 ntBASIC3.74□□□□□ -1.81
SNX3O60493 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC3.74□□□□□ -1.81
SNX3O60493 AC006989.1-201ENST00000427212 131 ntBASIC3.74□□□□□ -1.81
SNX3O60493 USP9YP11-201ENST00000427537 717 ntBASIC3.74□□□□□ -1.81
SNX3O60493 HMGB3P5-201ENST00000428894 612 ntBASIC3.74□□□□□ -1.81
SNX3O60493 BTF3P10-201ENST00000433415 495 ntBASIC3.74□□□□□ -1.81
SNX3O60493 ATP5F1P1-201ENST00000433775 569 ntBASIC3.74□□□□□ -1.81
SNX3O60493 NDUFB1P1-201ENST00000435191 180 ntBASIC3.74□□□□□ -1.81
SNX3O60493 PTMAP6-201ENST00000439110 327 ntBASIC3.74□□□□□ -1.81
SNX3O60493 RPL23AP33-201ENST00000442301 452 ntBASIC3.74□□□□□ -1.81
SNX3O60493 ELOCP13-201ENST00000443934 329 ntBASIC3.74□□□□□ -1.81
SNX3O60493 MTCO2P25-201ENST00000447065 681 ntBASIC3.74□□□□□ -1.81
SNX3O60493 RPL29P29-201ENST00000448725 423 ntBASIC3.74□□□□□ -1.81
SNX3O60493 NDUFS5P3-201ENST00000450668 321 ntBASIC3.74□□□□□ -1.81
SNX3O60493 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.74□□□□□ -1.81
SNX3O60493 AC006539.3-201ENST00000454258 129 ntBASIC3.74□□□□□ -1.81
SNX3O60493 NECAP1P2-201ENST00000455668 727 ntBASIC3.74□□□□□ -1.81
SNX3O60493 TRBV26-201ENST00000456572 344 ntBASIC3.74□□□□□ -1.81
SNX3O60493 RNU7-170P-201ENST00000459303 61 ntBASIC3.74□□□□□ -1.81
SNX3O60493 AC010401.1-201ENST00000463867 348 ntBASIC3.74□□□□□ -1.81
SNX3O60493 AC110768.1-201ENST00000509222 400 ntBASIC3.74□□□□□ -1.81
SNX3O60493 TMEM248P1-201ENST00000510579 951 ntBASIC3.74□□□□□ -1.81
SNX3O60493 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.74□□□□□ -1.81
SNX3O60493 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC3.74□□□□□ -1.81
SNX3O60493 LECT2-205ENST00000522943 574 ntTSL 3 BASIC3.74□□□□□ -1.81
SNX3O60493 AP001922.4-201ENST00000526967 290 ntBASIC3.74□□□□□ -1.81
SNX3O60493 OR4A12P-201ENST00000530847 918 ntBASIC3.74□□□□□ -1.81
SNX3O60493 AP000619.3-201ENST00000535634 1127 ntBASIC3.74□□□□□ -1.81
SNX3O60493 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.74□□□□□ -1.81
SNX3O60493 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC3.74□□□□□ -1.81
SNX3O60493 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.74□□□□□ -1.81
SNX3O60493 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.74□□□□□ -1.81
SNX3O60493 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.74□□□□□ -1.81
SNX3O60493 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.74□□□□□ -1.81
SNX3O60493 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.74□□□□□ -1.81
SNX3O60493 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.74□□□□□ -1.81
SNX3O60493 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.74□□□□□ -1.81
SNX3O60493 AL009028.1-201ENST00000604895 802 ntBASIC3.74□□□□□ -1.81
SNX3O60493 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC3.74□□□□□ -1.81
SNX3O60493 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.74□□□□□ -1.81
SNX3O60493 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.74□□□□□ -1.81
SNX3O60493 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC3.74□□□□□ -1.81
SNX3O60493 AC011330.2-201ENST00000621680 635 ntBASIC3.74□□□□□ -1.81
SNX3O60493 AL356863.1-201ENST00000623378 1080 ntBASIC3.74□□□□□ -1.81
SNX3O60493 AC006065.5-201ENST00000623427 349 ntBASIC3.74□□□□□ -1.81
SNX3O60493 AC120349.2-201ENST00000625002 298 ntBASIC3.74□□□□□ -1.81
SNX3O60493 AC092184.1-201ENST00000625042 715 ntBASIC3.74□□□□□ -1.81
SNX3O60493 OR5BE1P-202ENST00000641168 1176 ntBASIC3.74□□□□□ -1.81
SNX3O60493 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SNX3O60493 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC3.74□□□□□ -1.81
SNX3O60493 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SNX3O60493 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SNX3O60493 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
SNX3O60493 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SNX3O60493 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SNX3O60493 DCAF13P1-201ENST00000495256 1330 ntBASIC3.73□□□□□ -1.81
SNX3O60493 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SNX3O60493 MIR124-3-201ENST00000384866 87 ntBASIC3.73□□□□□ -1.81
SNX3O60493 MIR129-1-201ENST00000384972 72 ntBASIC3.73□□□□□ -1.81
SNX3O60493 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.73□□□□□ -1.81
SNX3O60493 RNU6-55P-201ENST00000411092 107 ntBASIC3.73□□□□□ -1.81
SNX3O60493 RNU6-954P-201ENST00000411355 107 ntBASIC3.73□□□□□ -1.81
SNX3O60493 RPL22P18-201ENST00000417197 377 ntBASIC3.73□□□□□ -1.81
SNX3O60493 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.73□□□□□ -1.81
SNX3O60493 XKRYP1-201ENST00000423438 492 ntBASIC3.73□□□□□ -1.81
SNX3O60493 AL158071.1-201ENST00000430315 461 ntBASIC3.73□□□□□ -1.81
SNX3O60493 XKRYP2-201ENST00000432915 492 ntBASIC3.73□□□□□ -1.81
SNX3O60493 CKS1BP5-201ENST00000434172 273 ntBASIC3.73□□□□□ -1.81
SNX3O60493 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.73□□□□□ -1.81
SNX3O60493 SNORA71B-202ENST00000439232 272 ntBASIC3.73□□□□□ -1.81
SNX3O60493 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC3.73□□□□□ -1.81
SNX3O60493 TXNP1-201ENST00000441872 371 ntBASIC3.73□□□□□ -1.81
SNX3O60493 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC3.73□□□□□ -1.81
SNX3O60493 RPL21P134-201ENST00000453468 483 ntBASIC3.73□□□□□ -1.81
SNX3O60493 AL136097.1-201ENST00000456945 913 ntBASIC3.73□□□□□ -1.81
SNX3O60493 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC3.73□□□□□ -1.81
SNX3O60493 AC007537.2-201ENST00000472093 511 ntBASIC3.73□□□□□ -1.81
SNX3O60493 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.73□□□□□ -1.81
SNX3O60493 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SNX3O60493 AC108941.1-201ENST00000502853 530 ntBASIC3.73□□□□□ -1.81
SNX3O60493 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.73□□□□□ -1.81
SNX3O60493 AC116353.3-201ENST00000511215 249 ntBASIC3.73□□□□□ -1.81
SNX3O60493 PTGES3P3-201ENST00000511479 482 ntBASIC3.73□□□□□ -1.81
SNX3O60493 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC3.73□□□□□ -1.81
SNX3O60493 AP001636.2-201ENST00000525517 696 ntBASIC3.73□□□□□ -1.81
SNX3O60493 BRD9P1-201ENST00000529855 560 ntBASIC3.73□□□□□ -1.81
SNX3O60493 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.73□□□□□ -1.81
SNX3O60493 PDCL2P2-201ENST00000533651 189 ntBASIC3.73□□□□□ -1.81
SNX3O60493 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SNX3O60493 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC3.73□□□□□ -1.81
SNX3O60493 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.73□□□□□ -1.81
SNX3O60493 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.73□□□□□ -1.81
SNX3O60493 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 136.4 ms