Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SSX4O60224 RNU6-374P-201ENST00000364146 108 ntBASIC3.86□□□□□ -1.79
SSX4O60224 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.86□□□□□ -1.79
SSX4O60224 RNU1-89P-201ENST00000384592 164 ntBASIC3.86□□□□□ -1.79
SSX4O60224 AL024474.1-201ENST00000404655 591 ntBASIC3.86□□□□□ -1.79
SSX4O60224 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.86□□□□□ -1.79
SSX4O60224 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.86□□□□□ -1.79
SSX4O60224 VPS26BP1-201ENST00000417155 755 ntBASIC3.86□□□□□ -1.79
SSX4O60224 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.86□□□□□ -1.79
SSX4O60224 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.86□□□□□ -1.79
SSX4O60224 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.86□□□□□ -1.79
SSX4O60224 RPS29P17-201ENST00000430795 166 ntBASIC3.86□□□□□ -1.79
SSX4O60224 CKS1BP5-201ENST00000434172 273 ntBASIC3.86□□□□□ -1.79
SSX4O60224 AL008629.1-201ENST00000438615 184 ntBASIC3.86□□□□□ -1.79
SSX4O60224 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.86□□□□□ -1.79
SSX4O60224 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.86□□□□□ -1.79
SSX4O60224 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC3.86□□□□□ -1.79
SSX4O60224 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.86□□□□□ -1.79
SSX4O60224 NUTF2P3-201ENST00000448540 384 ntBASIC3.86□□□□□ -1.79
SSX4O60224 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.86□□□□□ -1.79
SSX4O60224 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.86□□□□□ -1.79
SSX4O60224 MTCO2P6-201ENST00000463134 685 ntBASIC3.86□□□□□ -1.79
SSX4O60224 PABPC1P3-201ENST00000469174 459 ntBASIC3.86□□□□□ -1.79
SSX4O60224 AC022034.3-201ENST00000471393 478 ntBASIC3.86□□□□□ -1.79
SSX4O60224 RN7SL810P-201ENST00000493031 276 ntBASIC3.86□□□□□ -1.79
SSX4O60224 AC108941.1-201ENST00000502853 530 ntBASIC3.86□□□□□ -1.79
SSX4O60224 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC3.86□□□□□ -1.79
SSX4O60224 AC105185.1-201ENST00000518705 535 ntBASIC3.86□□□□□ -1.79
SSX4O60224 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC3.86□□□□□ -1.79
SSX4O60224 AP003461.1-201ENST00000528866 78 ntBASIC3.86□□□□□ -1.79
SSX4O60224 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
SSX4O60224 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC3.86□□□□□ -1.79
SSX4O60224 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC3.86□□□□□ -1.79
SSX4O60224 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC3.86□□□□□ -1.79
SSX4O60224 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.86□□□□□ -1.79
SSX4O60224 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.86□□□□□ -1.79
SSX4O60224 MIR1254-2-201ENST00000579553 63 ntBASIC3.86□□□□□ -1.79
SSX4O60224 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.86□□□□□ -1.79
SSX4O60224 NIFKP6-201ENST00000598115 845 ntBASIC3.86□□□□□ -1.79
SSX4O60224 AC006270.3-201ENST00000605967 1036 ntBASIC3.86□□□□□ -1.79
SSX4O60224 Z98200.1-201ENST00000607298 470 ntBASIC3.86□□□□□ -1.79
SSX4O60224 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.86□□□□□ -1.79
SSX4O60224 AL354976.1-201ENST00000613843 387 ntBASIC3.86□□□□□ -1.79
SSX4O60224 AC090116.1-201ENST00000615679 446 ntBASIC3.86□□□□□ -1.79
SSX4O60224 AC009318.4-201ENST00000620496 486 ntBASIC3.86□□□□□ -1.79
SSX4O60224 AC007546.2-201ENST00000623996 360 ntBASIC3.86□□□□□ -1.79
SSX4O60224 AC120349.3-201ENST00000624377 529 ntBASIC3.86□□□□□ -1.79
SSX4O60224 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.86□□□□□ -1.79
SSX4O60224 U6.101-201ENST00000637707 76 ntBASIC3.86□□□□□ -1.79
SSX4O60224 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.86□□□□□ -1.79
SSX4O60224 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
SSX4O60224 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.86□□□□□ -1.79
SSX4O60224 AC135352.1-201ENST00000506173 1418 ntBASIC3.86□□□□□ -1.79
SSX4O60224 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.86□□□□□ -1.79
SSX4O60224 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.86□□□□□ -1.79
SSX4O60224 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
SSX4O60224 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SSX4O60224 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.85□□□□□ -1.79
SSX4O60224 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
SSX4O60224 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
SSX4O60224 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SSX4O60224 RNU6-356P-201ENST00000384140 107 ntBASIC3.85□□□□□ -1.79
SSX4O60224 MIR659-201ENST00000384963 97 ntBASIC3.85□□□□□ -1.79
SSX4O60224 MIR1284-201ENST00000408337 120 ntBASIC3.85□□□□□ -1.79
SSX4O60224 RN7SKP263-201ENST00000411194 309 ntBASIC3.85□□□□□ -1.79
SSX4O60224 TMSB10P2-201ENST00000416049 131 ntBASIC3.85□□□□□ -1.79
SSX4O60224 AC005517.2-201ENST00000424673 553 ntBASIC3.85□□□□□ -1.79
SSX4O60224 RPS27AP12-201ENST00000429552 465 ntBASIC3.85□□□□□ -1.79
SSX4O60224 RPL23AP25-201ENST00000430973 463 ntBASIC3.85□□□□□ -1.79
SSX4O60224 MTCYBP31-201ENST00000438855 1122 ntBASIC3.85□□□□□ -1.79
SSX4O60224 MTND1P26-201ENST00000440488 538 ntBASIC3.85□□□□□ -1.79
SSX4O60224 PHBP16-201ENST00000446318 950 ntBASIC3.85□□□□□ -1.79
SSX4O60224 AL590399.6-201ENST00000446396 307 ntBASIC3.85□□□□□ -1.79
SSX4O60224 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.85□□□□□ -1.79
SSX4O60224 PLGLA-201ENST00000465668 449 ntBASIC3.85□□□□□ -1.79
SSX4O60224 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.85□□□□□ -1.79
SSX4O60224 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SSX4O60224 AC093767.1-201ENST00000504523 156 ntBASIC3.85□□□□□ -1.79
SSX4O60224 TMEM248P1-201ENST00000510579 951 ntBASIC3.85□□□□□ -1.79
SSX4O60224 MTCO3P44-201ENST00000510977 541 ntBASIC3.85□□□□□ -1.79
SSX4O60224 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.85□□□□□ -1.79
SSX4O60224 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.85□□□□□ -1.79
SSX4O60224 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.85□□□□□ -1.79
SSX4O60224 UBTFL10-201ENST00000528532 562 ntBASIC3.85□□□□□ -1.79
SSX4O60224 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.85□□□□□ -1.79
SSX4O60224 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SSX4O60224 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.85□□□□□ -1.79
SSX4O60224 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.85□□□□□ -1.79
SSX4O60224 BNIP3P5-201ENST00000562290 498 ntBASIC3.85□□□□□ -1.79
SSX4O60224 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.85□□□□□ -1.79
SSX4O60224 AL133457.1-201ENST00000564251 987 ntBASIC3.85□□□□□ -1.79
SSX4O60224 AC007224.1-201ENST00000564410 144 ntBASIC3.85□□□□□ -1.79
SSX4O60224 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC3.85□□□□□ -1.79
SSX4O60224 RPL23AP97-201ENST00000568955 471 ntBASIC3.85□□□□□ -1.79
SSX4O60224 AC141257.3-201ENST00000572906 215 ntBASIC3.85□□□□□ -1.79
SSX4O60224 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC3.85□□□□□ -1.79
SSX4O60224 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3.85□□□□□ -1.79
SSX4O60224 AL353778.1-201ENST00000603149 408 ntBASIC3.85□□□□□ -1.79
SSX4O60224 AL139344.1-201ENST00000605228 195 ntBASIC3.85□□□□□ -1.79
SSX4O60224 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms