Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AC068587.1-201ENST00000483613 781 ntBASIC4.3□□□□□ -1.72
SMAD6O43541 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.3□□□□□ -1.72
SMAD6O43541 CDH12P2-201ENST00000504393 298 ntBASIC4.3□□□□□ -1.72
SMAD6O43541 MTATP6P22-201ENST00000507369 598 ntBASIC4.3□□□□□ -1.72
SMAD6O43541 CDC42P4-201ENST00000510507 563 ntBASIC4.3□□□□□ -1.72
SMAD6O43541 AC099522.1-202ENST00000514718 367 ntBASIC4.3□□□□□ -1.72
SMAD6O43541 OR5AK3P-201ENST00000527486 1297 ntBASIC4.3□□□□□ -1.72
SMAD6O43541 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.3□□□□□ -1.72
SMAD6O43541 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.3□□□□□ -1.72
SMAD6O43541 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.3□□□□□ -1.72
SMAD6O43541 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC4.3□□□□□ -1.72
SMAD6O43541 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC4.3□□□□□ -1.72
SMAD6O43541 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC4.3□□□□□ -1.72
SMAD6O43541 AC087481.2-201ENST00000565492 330 ntBASIC4.3□□□□□ -1.72
SMAD6O43541 ROCK1P1-201ENST00000573767 549 ntBASIC4.3□□□□□ -1.72
SMAD6O43541 NF1P5-201ENST00000588287 448 ntBASIC4.3□□□□□ -1.72
SMAD6O43541 AP001542.2-201ENST00000593141 364 ntBASIC4.3□□□□□ -1.72
SMAD6O43541 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.3□□□□□ -1.72
SMAD6O43541 AC128687.1-201ENST00000605304 619 ntBASIC4.3□□□□□ -1.72
SMAD6O43541 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.3□□□□□ -1.72
SMAD6O43541 DLEU2_1.1-201ENST00000612089 120 ntBASIC4.3□□□□□ -1.72
SMAD6O43541 DLEU2_1.2-201ENST00000614667 120 ntBASIC4.3□□□□□ -1.72
SMAD6O43541 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC4.3□□□□□ -1.72
SMAD6O43541 AL138721.1-201ENST00000616756 179 ntBASIC4.3□□□□□ -1.72
SMAD6O43541 MIR7154-201ENST00000620673 73 ntBASIC4.3□□□□□ -1.72
SMAD6O43541 AC019278.1-201ENST00000623516 479 ntBASIC4.3□□□□□ -1.72
SMAD6O43541 AC124312.6-202ENST00000623624 418 ntBASIC4.3□□□□□ -1.72
SMAD6O43541 AC068724.3-201ENST00000625906 87 ntBASIC4.3□□□□□ -1.72
SMAD6O43541 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SMAD6O43541 AF001550.2-201ENST00000636643 217 ntBASIC4.3□□□□□ -1.72
SMAD6O43541 MFSD8-245ENST00000641743 948 ntBASIC4.3□□□□□ -1.72
SMAD6O43541 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
SMAD6O43541 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.3□□□□□ -1.72
SMAD6O43541 AC138393.1-206ENST00000540997 1886 ntBASIC4.3□□□□□ -1.72
SMAD6O43541 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SMAD6O43541 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.3□□□□□ -1.72
SMAD6O43541 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SMAD6O43541 AP005901.5-201ENST00000545779 1796 ntBASIC4.3□□□□□ -1.72
SMAD6O43541 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.3□□□□□ -1.72
SMAD6O43541 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SMAD6O43541 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SMAD6O43541 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC4.29□□□□□ -1.72
SMAD6O43541 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.29□□□□□ -1.72
SMAD6O43541 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
SMAD6O43541 SNORA62.2-201ENST00000364672 152 ntBASIC4.29□□□□□ -1.72
SMAD6O43541 RNU5E-4P-201ENST00000364931 120 ntBASIC4.29□□□□□ -1.72
SMAD6O43541 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SMAD6O43541 RNA5SP317-201ENST00000410176 116 ntBASIC4.29□□□□□ -1.72
SMAD6O43541 RNA5SP311-201ENST00000411290 116 ntBASIC4.29□□□□□ -1.72
SMAD6O43541 CDK8P2-201ENST00000415020 547 ntBASIC4.29□□□□□ -1.72
SMAD6O43541 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.29□□□□□ -1.72
SMAD6O43541 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.29□□□□□ -1.72
SMAD6O43541 AL022400.1-201ENST00000423946 935 ntBASIC4.29□□□□□ -1.72
SMAD6O43541 RPS27AP12-201ENST00000429552 465 ntBASIC4.29□□□□□ -1.72
SMAD6O43541 YWHAEP5-201ENST00000431545 765 ntBASIC4.29□□□□□ -1.72
SMAD6O43541 OR4C10P-201ENST00000434991 931 ntBASIC4.29□□□□□ -1.72
SMAD6O43541 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.29□□□□□ -1.72
SMAD6O43541 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC4.29□□□□□ -1.72
SMAD6O43541 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC4.29□□□□□ -1.72
SMAD6O43541 ZNF114P1-201ENST00000453500 292 ntBASIC4.29□□□□□ -1.72
SMAD6O43541 RPL5P32-201ENST00000454085 879 ntBASIC4.29□□□□□ -1.72
SMAD6O43541 RPL7AP28-201ENST00000464513 571 ntBASIC4.29□□□□□ -1.72
SMAD6O43541 RPL7P18-201ENST00000478965 734 ntBASIC4.29□□□□□ -1.72
SMAD6O43541 AL161747.1-201ENST00000480068 358 ntBASIC4.29□□□□□ -1.72
SMAD6O43541 RPL9P33-201ENST00000484311 566 ntBASIC4.29□□□□□ -1.72
SMAD6O43541 NCOR1P1-202ENST00000486162 291 ntBASIC4.29□□□□□ -1.72
SMAD6O43541 AF213884.1-201ENST00000488102 463 ntBASIC4.29□□□□□ -1.72
SMAD6O43541 RPS27AP13-201ENST00000498403 237 ntBASIC4.29□□□□□ -1.72
SMAD6O43541 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC4.29□□□□□ -1.72
SMAD6O43541 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.29□□□□□ -1.72
SMAD6O43541 MTCO1P35-201ENST00000515270 228 ntBASIC4.29□□□□□ -1.72
SMAD6O43541 HNRNPKP5-201ENST00000515300 253 ntBASIC4.29□□□□□ -1.72
SMAD6O43541 RNA5SP315-201ENST00000516340 116 ntBASIC4.29□□□□□ -1.72
SMAD6O43541 RN7SKP21-201ENST00000516503 220 ntBASIC4.29□□□□□ -1.72
SMAD6O43541 RNU6-1308P-201ENST00000516817 103 ntBASIC4.29□□□□□ -1.72
SMAD6O43541 RNA5SP312-201ENST00000517068 116 ntBASIC4.29□□□□□ -1.72
SMAD6O43541 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC4.29□□□□□ -1.72
SMAD6O43541 AC087883.1-201ENST00000551882 391 ntBASIC4.29□□□□□ -1.72
SMAD6O43541 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.29□□□□□ -1.72
SMAD6O43541 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.29□□□□□ -1.72
SMAD6O43541 AC245505.1-201ENST00000556398 224 ntBASIC4.29□□□□□ -1.72
SMAD6O43541 AC044913.1-201ENST00000557200 430 ntBASIC4.29□□□□□ -1.72
SMAD6O43541 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.29□□□□□ -1.72
SMAD6O43541 AC027104.1-201ENST00000563702 681 ntBASIC4.29□□□□□ -1.72
SMAD6O43541 ATP5F1P7-201ENST00000567330 760 ntBASIC4.29□□□□□ -1.72
SMAD6O43541 MIR3912-201ENST00000577566 105 ntBASIC4.29□□□□□ -1.72
SMAD6O43541 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.29□□□□□ -1.72
SMAD6O43541 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC4.29□□□□□ -1.72
SMAD6O43541 AC011451.2-201ENST00000604303 598 ntBASIC4.29□□□□□ -1.72
SMAD6O43541 AP003973.1-201ENST00000604639 691 ntBASIC4.29□□□□□ -1.72
SMAD6O43541 AC018714.1-201ENST00000605028 208 ntBASIC4.29□□□□□ -1.72
SMAD6O43541 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.29□□□□□ -1.72
SMAD6O43541 AC078899.5-201ENST00000612475 178 ntBASIC4.29□□□□□ -1.72
SMAD6O43541 AC008498.1-201ENST00000613012 531 ntBASIC4.29□□□□□ -1.72
SMAD6O43541 AC010678.1-201ENST00000614118 713 ntBASIC4.29□□□□□ -1.72
SMAD6O43541 AC026368.1-201ENST00000614934 690 ntBASIC4.29□□□□□ -1.72
SMAD6O43541 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
SMAD6O43541 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
SMAD6O43541 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.29□□□□□ -1.72
SMAD6O43541 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms