Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
PRPF3O43395 SNORA56-201ENST00000383966 129 ntBASIC5.03□□□□□ -1.6
PRPF3O43395 RNU6-723P-201ENST00000383973 107 ntBASIC5.03□□□□□ -1.6
PRPF3O43395 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PRPF3O43395 RPS24P12-201ENST00000402084 394 ntBASIC5.03□□□□□ -1.6
PRPF3O43395 MIR1302-8-201ENST00000408342 128 ntBASIC5.03□□□□□ -1.6
PRPF3O43395 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.03□□□□□ -1.6
PRPF3O43395 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC5.03□□□□□ -1.6
PRPF3O43395 TPMTP2-201ENST00000414372 726 ntBASIC5.03□□□□□ -1.6
PRPF3O43395 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.03□□□□□ -1.6
PRPF3O43395 OFD1P12Y-201ENST00000427963 1207 ntBASIC5.03□□□□□ -1.6
PRPF3O43395 DNAJC19P7-201ENST00000428811 344 ntBASIC5.03□□□□□ -1.6
PRPF3O43395 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.03□□□□□ -1.6
PRPF3O43395 CCNB1IP1P2-201ENST00000432876 818 ntBASIC5.03□□□□□ -1.6
PRPF3O43395 AC011998.1-201ENST00000433403 117 ntBASIC5.03□□□□□ -1.6
PRPF3O43395 ISCA1P2-201ENST00000438679 421 ntBASIC5.03□□□□□ -1.6
PRPF3O43395 RPL23AP33-201ENST00000442301 452 ntBASIC5.03□□□□□ -1.6
PRPF3O43395 AC009961.3-201ENST00000449832 765 ntBASIC5.03□□□□□ -1.6
PRPF3O43395 HCG17-214ENST00000453558 732 ntTSL 5 BASIC5.03□□□□□ -1.6
PRPF3O43395 MTCO3P16-201ENST00000454456 754 ntBASIC5.03□□□□□ -1.6
PRPF3O43395 RPL23AP24-201ENST00000458203 385 ntBASIC5.03□□□□□ -1.6
PRPF3O43395 RPL31P3-201ENST00000458430 332 ntBASIC5.03□□□□□ -1.6
PRPF3O43395 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.03□□□□□ -1.6
PRPF3O43395 RNU7-136P-201ENST00000458819 69 ntBASIC5.03□□□□□ -1.6
PRPF3O43395 MEMO1P3-201ENST00000459811 302 ntBASIC5.03□□□□□ -1.6
PRPF3O43395 AHI1-208ENST00000488690 712 ntTSL 5 BASIC5.03□□□□□ -1.6
PRPF3O43395 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC5.03□□□□□ -1.6
PRPF3O43395 TMEM251P1-201ENST00000503717 318 ntBASIC5.03□□□□□ -1.6
PRPF3O43395 AC112198.1-201ENST00000505369 1220 ntBASIC5.03□□□□□ -1.6
PRPF3O43395 AC024589.1-201ENST00000512207 263 ntBASIC5.03□□□□□ -1.6
PRPF3O43395 RNU6-759P-201ENST00000516740 103 ntBASIC5.03□□□□□ -1.6
PRPF3O43395 RN7SKP116-201ENST00000516902 319 ntBASIC5.03□□□□□ -1.6
PRPF3O43395 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC5.03□□□□□ -1.6
PRPF3O43395 OR6C73P-201ENST00000546432 358 ntBASIC5.03□□□□□ -1.6
PRPF3O43395 AL352979.3-201ENST00000553515 247 ntBASIC5.03□□□□□ -1.6
PRPF3O43395 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC5.03□□□□□ -1.6
PRPF3O43395 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC5.03□□□□□ -1.6
PRPF3O43395 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC5.03□□□□□ -1.6
PRPF3O43395 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC5.03□□□□□ -1.6
PRPF3O43395 KPNA2P3-201ENST00000584190 848 ntBASIC5.03□□□□□ -1.6
PRPF3O43395 MAGOH2P-202ENST00000584384 429 ntBASIC5.03□□□□□ -1.6
PRPF3O43395 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.03□□□□□ -1.6
PRPF3O43395 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PRPF3O43395 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC5.03□□□□□ -1.6
PRPF3O43395 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC5.03□□□□□ -1.6
PRPF3O43395 AC090116.1-201ENST00000615679 446 ntBASIC5.03□□□□□ -1.6
PRPF3O43395 AC007546.1-201ENST00000619452 559 ntBASIC5.03□□□□□ -1.6
PRPF3O43395 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC5.03□□□□□ -1.6
PRPF3O43395 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.03□□□□□ -1.6
PRPF3O43395 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
PRPF3O43395 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PRPF3O43395 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PRPF3O43395 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PRPF3O43395 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PRPF3O43395 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC5.03□□□□□ -1.6
PRPF3O43395 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.03□□□□□ -1.6
PRPF3O43395 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
PRPF3O43395 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PRPF3O43395 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
PRPF3O43395 RNA5SP175-201ENST00000364275 119 ntBASIC5.02□□□□□ -1.61
PRPF3O43395 SNORD82-201ENST00000365530 70 ntBASIC5.02□□□□□ -1.61
PRPF3O43395 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PRPF3O43395 MT-TC-201ENST00000387405 66 ntBASIC5.02□□□□□ -1.61
PRPF3O43395 SNORD66.1-201ENST00000391230 76 ntBASIC5.02□□□□□ -1.61
PRPF3O43395 MTND4LP20-201ENST00000402379 270 ntBASIC5.02□□□□□ -1.61
PRPF3O43395 HDGFP1-201ENST00000405943 252 ntBASIC5.02□□□□□ -1.61
PRPF3O43395 MTATP6P27-201ENST00000416987 621 ntBASIC5.02□□□□□ -1.61
PRPF3O43395 MAP1LC3BP1-201ENST00000417653 379 ntBASIC5.02□□□□□ -1.61
PRPF3O43395 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC5.02□□□□□ -1.61
PRPF3O43395 MUPP-201ENST00000438111 566 ntBASIC5.02□□□□□ -1.61
PRPF3O43395 RPL23AP52-201ENST00000439311 478 ntBASIC5.02□□□□□ -1.61
PRPF3O43395 UBE2D3P4-201ENST00000441973 436 ntBASIC5.02□□□□□ -1.61
PRPF3O43395 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC5.02□□□□□ -1.61
PRPF3O43395 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC5.02□□□□□ -1.61
PRPF3O43395 AC092754.2-201ENST00000463506 460 ntBASIC5.02□□□□□ -1.61
PRPF3O43395 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC5.02□□□□□ -1.61
PRPF3O43395 AC113430.1-201ENST00000506872 718 ntBASIC5.02□□□□□ -1.61
PRPF3O43395 TMEM248P1-201ENST00000510579 951 ntBASIC5.02□□□□□ -1.61
PRPF3O43395 AC008694.2-201ENST00000517591 306 ntBASIC5.02□□□□□ -1.61
PRPF3O43395 AC106038.2-201ENST00000520706 568 ntBASIC5.02□□□□□ -1.61
PRPF3O43395 AC090819.1-201ENST00000523800 1111 ntBASIC5.02□□□□□ -1.61
PRPF3O43395 TRAV8-5-201ENST00000537369 341 ntBASIC5.02□□□□□ -1.61
PRPF3O43395 AKIRIN1P1-201ENST00000547384 544 ntBASIC5.02□□□□□ -1.61
PRPF3O43395 NBR2-204ENST00000587322 63 ntBASIC5.02□□□□□ -1.61
PRPF3O43395 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC5.02□□□□□ -1.61
PRPF3O43395 AL031985.2-201ENST00000600955 480 ntBASIC5.02□□□□□ -1.61
PRPF3O43395 AL354984.3-201ENST00000604803 325 ntBASIC5.02□□□□□ -1.61
PRPF3O43395 ACTR3BP1-201ENST00000605584 1247 ntBASIC5.02□□□□□ -1.61
PRPF3O43395 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC5.02□□□□□ -1.61
PRPF3O43395 AL121873.1-201ENST00000616013 524 ntBASIC5.02□□□□□ -1.61
PRPF3O43395 AC019278.1-201ENST00000623516 479 ntBASIC5.02□□□□□ -1.61
PRPF3O43395 MIR7641-1-201ENST00000627518 61 ntBASIC5.02□□□□□ -1.61
PRPF3O43395 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC5.02□□□□□ -1.61
PRPF3O43395 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC5.02□□□□□ -1.61
PRPF3O43395 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
PRPF3O43395 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
PRPF3O43395 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.02□□□□□ -1.61
PRPF3O43395 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC5.02□□□□□ -1.61
PRPF3O43395 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PRPF3O43395 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms