Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
PHGDHO43175 AL161781.1-201ENST00000354277 403 ntBASIC4.62□□□□□ -1.67
PHGDHO43175 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
PHGDHO43175 RNA5SP507-201ENST00000363603 121 ntBASIC4.62□□□□□ -1.67
PHGDHO43175 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
PHGDHO43175 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC4.62□□□□□ -1.67
PHGDHO43175 SNORA75-201ENST00000384158 137 ntBASIC4.62□□□□□ -1.67
PHGDHO43175 MIR195-201ENST00000385194 87 ntBASIC4.62□□□□□ -1.67
PHGDHO43175 RNU2-16P-201ENST00000410712 136 ntBASIC4.62□□□□□ -1.67
PHGDHO43175 RNA5SP146-201ENST00000410743 123 ntBASIC4.62□□□□□ -1.67
PHGDHO43175 AL591848.1-201ENST00000413092 322 ntBASIC4.62□□□□□ -1.67
PHGDHO43175 RPL21P108-201ENST00000413857 481 ntBASIC4.62□□□□□ -1.67
PHGDHO43175 RPL21P32-201ENST00000419877 477 ntBASIC4.62□□□□□ -1.67
PHGDHO43175 AL513174.1-201ENST00000423182 629 ntBASIC4.62□□□□□ -1.67
PHGDHO43175 AC007742.1-201ENST00000425789 329 ntBASIC4.62□□□□□ -1.67
PHGDHO43175 AL356583.2-201ENST00000426536 280 ntBASIC4.62□□□□□ -1.67
PHGDHO43175 OFD1P13Y-201ENST00000431179 1232 ntBASIC4.62□□□□□ -1.67
PHGDHO43175 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.62□□□□□ -1.67
PHGDHO43175 LYPLA1P1-201ENST00000434514 622 ntBASIC4.62□□□□□ -1.67
PHGDHO43175 MTCYBP45-201ENST00000435243 565 ntBASIC4.62□□□□□ -1.67
PHGDHO43175 ELOCP26-201ENST00000436067 329 ntBASIC4.62□□□□□ -1.67
PHGDHO43175 CEACAMP7-201ENST00000444105 496 ntBASIC4.62□□□□□ -1.67
PHGDHO43175 RPL7P36-201ENST00000444633 681 ntBASIC4.62□□□□□ -1.67
PHGDHO43175 RPL7P52-201ENST00000449200 742 ntBASIC4.62□□□□□ -1.67
PHGDHO43175 PDSS1P2-201ENST00000449397 678 ntBASIC4.62□□□□□ -1.67
PHGDHO43175 USP9YP12-201ENST00000450481 570 ntBASIC4.62□□□□□ -1.67
PHGDHO43175 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.62□□□□□ -1.67
PHGDHO43175 RPL7AP28-201ENST00000464513 571 ntBASIC4.62□□□□□ -1.67
PHGDHO43175 AC023424.2-201ENST00000493479 777 ntBASIC4.62□□□□□ -1.67
PHGDHO43175 RN7SL808P-201ENST00000496066 299 ntBASIC4.62□□□□□ -1.67
PHGDHO43175 AC025164.1-201ENST00000496249 478 ntBASIC4.62□□□□□ -1.67
PHGDHO43175 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.62□□□□□ -1.67
PHGDHO43175 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC4.62□□□□□ -1.67
PHGDHO43175 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.62□□□□□ -1.67
PHGDHO43175 STMN1P2-201ENST00000508435 439 ntBASIC4.62□□□□□ -1.67
PHGDHO43175 TXNP6-201ENST00000510190 310 ntBASIC4.62□□□□□ -1.67
PHGDHO43175 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.62□□□□□ -1.67
PHGDHO43175 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.62□□□□□ -1.67
PHGDHO43175 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.62□□□□□ -1.67
PHGDHO43175 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.62□□□□□ -1.67
PHGDHO43175 AC021006.3-201ENST00000530771 192 ntBASIC4.62□□□□□ -1.67
PHGDHO43175 GSTP1P1-201ENST00000548078 319 ntBASIC4.62□□□□□ -1.67
PHGDHO43175 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.62□□□□□ -1.67
PHGDHO43175 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.62□□□□□ -1.67
PHGDHO43175 RPL21P7-201ENST00000557463 483 ntBASIC4.62□□□□□ -1.67
PHGDHO43175 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC4.62□□□□□ -1.67
PHGDHO43175 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC4.62□□□□□ -1.67
PHGDHO43175 MIR5697-201ENST00000578045 78 ntBASIC4.62□□□□□ -1.67
PHGDHO43175 AC005771.1-201ENST00000585581 349 ntBASIC4.62□□□□□ -1.67
PHGDHO43175 TPMTP1-201ENST00000592307 737 ntBASIC4.62□□□□□ -1.67
PHGDHO43175 AC078795.2-201ENST00000602835 1252 ntBASIC4.62□□□□□ -1.67
PHGDHO43175 AC079089.3-201ENST00000603094 673 ntBASIC4.62□□□□□ -1.67
PHGDHO43175 AL445222.1-201ENST00000607259 628 ntBASIC4.62□□□□□ -1.67
PHGDHO43175 AC099669.2-201ENST00000616549 437 ntBASIC4.62□□□□□ -1.67
PHGDHO43175 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.62□□□□□ -1.67
PHGDHO43175 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.62□□□□□ -1.67
PHGDHO43175 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PHGDHO43175 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.62□□□□□ -1.67
PHGDHO43175 LINC01109-201ENST00000603837 3081 ntBASIC4.62□□□□□ -1.67
PHGDHO43175 AC109780.1-201ENST00000451768 1344 ntBASIC4.62□□□□□ -1.67
PHGDHO43175 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.62□□□□□ -1.67
PHGDHO43175 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PHGDHO43175 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC4.62□□□□□ -1.67
PHGDHO43175 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.62□□□□□ -1.67
PHGDHO43175 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.62□□□□□ -1.67
PHGDHO43175 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.62□□□□□ -1.67
PHGDHO43175 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PHGDHO43175 AC017104.4-201ENST00000636283 1592 ntBASIC4.61□□□□□ -1.67
PHGDHO43175 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PHGDHO43175 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.61□□□□□ -1.67
PHGDHO43175 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
PHGDHO43175 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.61□□□□□ -1.67
PHGDHO43175 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.61□□□□□ -1.67
PHGDHO43175 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PHGDHO43175 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC4.61□□□□□ -1.67
PHGDHO43175 SNORA74A-201ENST00000364089 198 ntBASIC4.61□□□□□ -1.67
PHGDHO43175 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
PHGDHO43175 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC4.61□□□□□ -1.67
PHGDHO43175 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
PHGDHO43175 RNU6-533P-201ENST00000384144 107 ntBASIC4.61□□□□□ -1.67
PHGDHO43175 Y_RNA.493-201ENST00000384422 102 ntBASIC4.61□□□□□ -1.67
PHGDHO43175 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
PHGDHO43175 MIR921-201ENST00000401133 56 ntBASIC4.61□□□□□ -1.67
PHGDHO43175 DPPA2P3-201ENST00000411853 655 ntBASIC4.61□□□□□ -1.67
PHGDHO43175 RSU1P3-201ENST00000412878 835 ntBASIC4.61□□□□□ -1.67
PHGDHO43175 Z97055.1-201ENST00000419730 712 ntBASIC4.61□□□□□ -1.67
PHGDHO43175 B3GALNT1P1-201ENST00000420569 975 ntBASIC4.61□□□□□ -1.67
PHGDHO43175 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC4.61□□□□□ -1.67
PHGDHO43175 SKP1P1-201ENST00000438081 489 ntBASIC4.61□□□□□ -1.67
PHGDHO43175 AL357520.1-201ENST00000441557 453 ntBASIC4.61□□□□□ -1.67
PHGDHO43175 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.61□□□□□ -1.67
PHGDHO43175 MTND1P27-201ENST00000451117 902 ntBASIC4.61□□□□□ -1.67
PHGDHO43175 RPS5P7-201ENST00000456664 608 ntBASIC4.61□□□□□ -1.67
PHGDHO43175 MTCO1P42-201ENST00000457379 726 ntBASIC4.61□□□□□ -1.67
PHGDHO43175 SCARNA22-201ENST00000503991 125 ntBASIC4.61□□□□□ -1.67
PHGDHO43175 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.61□□□□□ -1.67
PHGDHO43175 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC4.61□□□□□ -1.67
PHGDHO43175 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PHGDHO43175 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC4.61□□□□□ -1.67
PHGDHO43175 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms