Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
MSH4O15457 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.69□□□□□ -1.82
MSH4O15457 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
MSH4O15457 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.69□□□□□ -1.82
MSH4O15457 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.68□□□□□ -1.82
MSH4O15457 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.68□□□□□ -1.82
MSH4O15457 AC095050.2-201ENST00000510748 1458 ntBASIC3.68□□□□□ -1.82
MSH4O15457 HSPA8P1-201ENST00000425843 1833 ntBASIC3.68□□□□□ -1.82
MSH4O15457 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.68□□□□□ -1.82
MSH4O15457 AL512283.1-201ENST00000606756 1384 ntBASIC3.68□□□□□ -1.82
MSH4O15457 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
MSH4O15457 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
MSH4O15457 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.68□□□□□ -1.82
MSH4O15457 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.68□□□□□ -1.82
MSH4O15457 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
MSH4O15457 AP002088.1-201ENST00000382740 395 ntBASIC3.68□□□□□ -1.82
MSH4O15457 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.68□□□□□ -1.82
MSH4O15457 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
MSH4O15457 AL445183.3-201ENST00000414168 502 ntBASIC3.68□□□□□ -1.82
MSH4O15457 AC008173.1-201ENST00000418901 264 ntBASIC3.68□□□□□ -1.82
MSH4O15457 RPS12P23-201ENST00000419579 400 ntBASIC3.68□□□□□ -1.82
MSH4O15457 AL606495.1-201ENST00000422100 813 ntBASIC3.68□□□□□ -1.82
MSH4O15457 MTCO1P43-201ENST00000431831 488 ntBASIC3.68□□□□□ -1.82
MSH4O15457 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.68□□□□□ -1.82
MSH4O15457 HMGB1P48-201ENST00000446155 598 ntBASIC3.68□□□□□ -1.82
MSH4O15457 EXTL2P1-201ENST00000446218 416 ntBASIC3.68□□□□□ -1.82
MSH4O15457 AL645939.1-201ENST00000453429 797 ntBASIC3.68□□□□□ -1.82
MSH4O15457 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.68□□□□□ -1.82
MSH4O15457 AC078857.1-201ENST00000469870 667 ntBASIC3.68□□□□□ -1.82
MSH4O15457 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
MSH4O15457 S100A11P1-201ENST00000477525 312 ntBASIC3.68□□□□□ -1.82
MSH4O15457 AP000926.1-201ENST00000479573 241 ntBASIC3.68□□□□□ -1.82
MSH4O15457 RPL21P47-201ENST00000483696 477 ntBASIC3.68□□□□□ -1.82
MSH4O15457 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC3.68□□□□□ -1.82
MSH4O15457 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.68□□□□□ -1.82
MSH4O15457 AC104108.1-201ENST00000509930 412 ntBASIC3.68□□□□□ -1.82
MSH4O15457 ARL2BPP6-201ENST00000512757 439 ntBASIC3.68□□□□□ -1.82
MSH4O15457 PHBP14-201ENST00000512887 367 ntBASIC3.68□□□□□ -1.82
MSH4O15457 IGKV2D-23-201ENST00000518179 286 ntBASIC3.68□□□□□ -1.82
MSH4O15457 AL139174.1-201ENST00000531489 886 ntBASIC3.68□□□□□ -1.82
MSH4O15457 AP001180.3-201ENST00000582221 145 ntBASIC3.68□□□□□ -1.82
MSH4O15457 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC3.68□□□□□ -1.82
MSH4O15457 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.68□□□□□ -1.82
MSH4O15457 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.68□□□□□ -1.82
MSH4O15457 AC113194.1-201ENST00000606037 500 ntBASIC3.68□□□□□ -1.82
MSH4O15457 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.68□□□□□ -1.82
MSH4O15457 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.68□□□□□ -1.82
MSH4O15457 AC096586.1-201ENST00000610267 561 ntBASIC3.68□□□□□ -1.82
MSH4O15457 AL442067.2-201ENST00000614033 363 ntBASIC3.68□□□□□ -1.82
MSH4O15457 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.68□□□□□ -1.82
MSH4O15457 AP003400.6-201ENST00000624698 740 ntBASIC3.68□□□□□ -1.82
MSH4O15457 AC017104.5-201ENST00000637647 639 ntBASIC3.68□□□□□ -1.82
MSH4O15457 AC132825.7-201ENST00000638744 335 ntBASIC3.68□□□□□ -1.82
MSH4O15457 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
MSH4O15457 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
MSH4O15457 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
MSH4O15457 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
MSH4O15457 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.67□□□□□ -1.82
MSH4O15457 AC073346.2-201ENST00000624724 2058 ntBASIC3.67□□□□□ -1.82
MSH4O15457 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
MSH4O15457 RNU6-1339P-201ENST00000363574 91 ntBASIC3.67□□□□□ -1.82
MSH4O15457 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
MSH4O15457 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.67□□□□□ -1.82
MSH4O15457 MIR23A-201ENST00000385245 73 ntBASIC3.67□□□□□ -1.82
MSH4O15457 TAF9BP1-201ENST00000396646 746 ntBASIC3.67□□□□□ -1.82
MSH4O15457 RNU2-72P-201ENST00000411175 163 ntBASIC3.67□□□□□ -1.82
MSH4O15457 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.67□□□□□ -1.82
MSH4O15457 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.67□□□□□ -1.82
MSH4O15457 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.67□□□□□ -1.82
MSH4O15457 DNAJC19P8-201ENST00000452887 259 ntBASIC3.67□□□□□ -1.82
MSH4O15457 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.67□□□□□ -1.82
MSH4O15457 CYCSP20-201ENST00000473154 315 ntBASIC3.67□□□□□ -1.82
MSH4O15457 AC092045.1-201ENST00000495716 1231 ntBASIC3.67□□□□□ -1.82
MSH4O15457 AC110794.1-201ENST00000505816 425 ntBASIC3.67□□□□□ -1.82
MSH4O15457 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.67□□□□□ -1.82
MSH4O15457 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.67□□□□□ -1.82
MSH4O15457 AC005351.1-201ENST00000511152 786 ntBASIC3.67□□□□□ -1.82
MSH4O15457 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.67□□□□□ -1.82
MSH4O15457 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.67□□□□□ -1.82
MSH4O15457 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.67□□□□□ -1.82
MSH4O15457 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.67□□□□□ -1.82
MSH4O15457 AP000916.1-201ENST00000533869 835 ntBASIC3.67□□□□□ -1.82
MSH4O15457 CBX3P5-201ENST00000552017 521 ntBASIC3.67□□□□□ -1.82
MSH4O15457 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.67□□□□□ -1.82
MSH4O15457 MIR2682-201ENST00000580305 110 ntBASIC3.67□□□□□ -1.82
MSH4O15457 AC017100.2-201ENST00000584628 355 ntBASIC3.67□□□□□ -1.82
MSH4O15457 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.67□□□□□ -1.82
MSH4O15457 AC092474.3-201ENST00000603022 568 ntBASIC3.67□□□□□ -1.82
MSH4O15457 AP003117.2-201ENST00000606010 545 ntBASIC3.67□□□□□ -1.82
MSH4O15457 MIR6864-201ENST00000617935 70 ntBASIC3.67□□□□□ -1.82
MSH4O15457 AC018926.3-201ENST00000618841 406 ntBASIC3.67□□□□□ -1.82
MSH4O15457 AC006213.5-201ENST00000619673 288 ntBASIC3.67□□□□□ -1.82
MSH4O15457 AC097372.4-201ENST00000625025 466 ntBASIC3.67□□□□□ -1.82
MSH4O15457 MIR3651-201ENST00000630427 90 ntBASIC3.67□□□□□ -1.82
MSH4O15457 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.67□□□□□ -1.82
MSH4O15457 DCAF13P3-201ENST00000561147 1334 ntBASIC3.67□□□□□ -1.82
MSH4O15457 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.67□□□□□ -1.82
MSH4O15457 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
MSH4O15457 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.66□□□□□ -1.82
MSH4O15457 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 357.2 ms