Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.59□□□□□ -1.83
PDLIM1O00151 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
PDLIM1O00151 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.59□□□□□ -1.83
PDLIM1O00151 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PDLIM1O00151 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
PDLIM1O00151 RN7SKP227-201ENST00000364445 330 ntBASIC3.59□□□□□ -1.83
PDLIM1O00151 RNA5SP515-201ENST00000364570 118 ntBASIC3.59□□□□□ -1.83
PDLIM1O00151 OR1L1-202ENST00000373686 1083 ntBASIC3.59□□□□□ -1.83
PDLIM1O00151 RNU6-1257P-201ENST00000384625 110 ntBASIC3.59□□□□□ -1.83
PDLIM1O00151 RNU6-1151P-201ENST00000384684 107 ntBASIC3.59□□□□□ -1.83
PDLIM1O00151 EIF5P1-201ENST00000400019 1231 ntBASIC3.59□□□□□ -1.83
PDLIM1O00151 GSTA8P-201ENST00000404253 637 ntBASIC3.59□□□□□ -1.83
PDLIM1O00151 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.59□□□□□ -1.83
PDLIM1O00151 HSPE1P12-201ENST00000412576 301 ntBASIC3.59□□□□□ -1.83
PDLIM1O00151 OR51A3P-201ENST00000413596 924 ntBASIC3.59□□□□□ -1.83
PDLIM1O00151 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PDLIM1O00151 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.59□□□□□ -1.83
PDLIM1O00151 ZNF736P7Y-201ENST00000425158 820 ntBASIC3.59□□□□□ -1.83
PDLIM1O00151 OR5BE1P-201ENST00000425977 939 ntBASIC3.59□□□□□ -1.83
PDLIM1O00151 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.59□□□□□ -1.83
PDLIM1O00151 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.59□□□□□ -1.83
PDLIM1O00151 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.59□□□□□ -1.83
PDLIM1O00151 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.59□□□□□ -1.83
PDLIM1O00151 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.59□□□□□ -1.83
PDLIM1O00151 NDUFAF4P2-201ENST00000445374 520 ntBASIC3.59□□□□□ -1.83
PDLIM1O00151 RPS11P1-201ENST00000451072 473 ntBASIC3.59□□□□□ -1.83
PDLIM1O00151 RPS4XP2-201ENST00000458402 793 ntBASIC3.59□□□□□ -1.83
PDLIM1O00151 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC3.59□□□□□ -1.83
PDLIM1O00151 AC108860.1-201ENST00000484521 383 ntBASIC3.59□□□□□ -1.83
PDLIM1O00151 AL132838.2-201ENST00000492041 314 ntBASIC3.59□□□□□ -1.83
PDLIM1O00151 AC026414.1-201ENST00000504046 698 ntBASIC3.59□□□□□ -1.83
PDLIM1O00151 AC118282.2-201ENST00000508739 374 ntBASIC3.59□□□□□ -1.83
PDLIM1O00151 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.59□□□□□ -1.83
PDLIM1O00151 RN7SKP209-201ENST00000516888 304 ntBASIC3.59□□□□□ -1.83
PDLIM1O00151 RN7SKP277-201ENST00000516895 283 ntBASIC3.59□□□□□ -1.83
PDLIM1O00151 MIR2116-201ENST00000517221 80 ntBASIC3.59□□□□□ -1.83
PDLIM1O00151 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.59□□□□□ -1.83
PDLIM1O00151 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.59□□□□□ -1.83
PDLIM1O00151 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.59□□□□□ -1.83
PDLIM1O00151 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.59□□□□□ -1.83
PDLIM1O00151 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC3.59□□□□□ -1.83
PDLIM1O00151 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC3.59□□□□□ -1.83
PDLIM1O00151 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.59□□□□□ -1.83
PDLIM1O00151 AC006270.2-201ENST00000578523 652 ntBASIC3.59□□□□□ -1.83
PDLIM1O00151 AP004247.3-201ENST00000608682 624 ntBASIC3.59□□□□□ -1.83
PDLIM1O00151 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
PDLIM1O00151 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.59□□□□□ -1.83
PDLIM1O00151 AC013437.2-201ENST00000639587 677 ntBASIC3.59□□□□□ -1.83
PDLIM1O00151 OR5BE1P-202ENST00000641168 1176 ntBASIC3.59□□□□□ -1.83
PDLIM1O00151 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.59□□□□□ -1.83
PDLIM1O00151 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PDLIM1O00151 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PDLIM1O00151 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.59□□□□□ -1.84
PDLIM1O00151 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.59□□□□□ -1.84
PDLIM1O00151 CASC19-261ENST00000641853 1638 ntBASIC3.59□□□□□ -1.84
PDLIM1O00151 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
PDLIM1O00151 RLIMP1-201ENST00000339626 1680 ntBASIC3.59□□□□□ -1.84
PDLIM1O00151 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.58□□□□□ -1.84
PDLIM1O00151 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.58□□□□□ -1.84
PDLIM1O00151 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PDLIM1O00151 UBE2Q2P1-202ENST00000354771 883 ntBASIC3.58□□□□□ -1.84
PDLIM1O00151 MIR372-201ENST00000362225 67 ntBASIC3.58□□□□□ -1.84
PDLIM1O00151 MIR620-201ENST00000385232 95 ntBASIC3.58□□□□□ -1.84
PDLIM1O00151 MIR16-1-201ENST00000385271 89 ntBASIC3.58□□□□□ -1.84
PDLIM1O00151 SFR1P1-201ENST00000403720 688 ntBASIC3.58□□□□□ -1.84
PDLIM1O00151 PPIAP31-201ENST00000405422 495 ntBASIC3.58□□□□□ -1.84
PDLIM1O00151 RNU2-21P-201ENST00000410368 188 ntBASIC3.58□□□□□ -1.84
PDLIM1O00151 MTND2P16-201ENST00000419987 799 ntBASIC3.58□□□□□ -1.84
PDLIM1O00151 BX890604.2-201ENST00000427883 474 ntBASIC3.58□□□□□ -1.84
PDLIM1O00151 RPL36P19-201ENST00000430744 301 ntBASIC3.58□□□□□ -1.84
PDLIM1O00151 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.58□□□□□ -1.84
PDLIM1O00151 AC010881.1-201ENST00000433830 235 ntBASIC3.58□□□□□ -1.84
PDLIM1O00151 CKS1BP5-201ENST00000434172 273 ntBASIC3.58□□□□□ -1.84
PDLIM1O00151 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.58□□□□□ -1.84
PDLIM1O00151 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.58□□□□□ -1.84
PDLIM1O00151 AC084198.1-201ENST00000477747 402 ntBASIC3.58□□□□□ -1.84
PDLIM1O00151 AC078817.1-201ENST00000492623 435 ntBASIC3.58□□□□□ -1.84
PDLIM1O00151 AC093663.1-201ENST00000497190 394 ntBASIC3.58□□□□□ -1.84
PDLIM1O00151 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.58□□□□□ -1.84
PDLIM1O00151 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.58□□□□□ -1.84
PDLIM1O00151 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PDLIM1O00151 RNA5SP208-201ENST00000516156 78 ntBASIC3.58□□□□□ -1.84
PDLIM1O00151 RNU4-60P-201ENST00000517239 135 ntBASIC3.58□□□□□ -1.84
PDLIM1O00151 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC3.58□□□□□ -1.84
PDLIM1O00151 AC104417.1-201ENST00000523974 751 ntBASIC3.58□□□□□ -1.84
PDLIM1O00151 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.58□□□□□ -1.84
PDLIM1O00151 MTND2P26-201ENST00000528255 1029 ntBASIC3.58□□□□□ -1.84
PDLIM1O00151 OR5AP1P-201ENST00000529730 940 ntBASIC3.58□□□□□ -1.84
PDLIM1O00151 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.58□□□□□ -1.84
PDLIM1O00151 AP000619.3-201ENST00000535634 1127 ntBASIC3.58□□□□□ -1.84
PDLIM1O00151 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.58□□□□□ -1.84
PDLIM1O00151 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC3.58□□□□□ -1.84
PDLIM1O00151 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PDLIM1O00151 YWHAZP1-201ENST00000556286 722 ntBASIC3.58□□□□□ -1.84
PDLIM1O00151 EIF5A2P1-201ENST00000564027 460 ntBASIC3.58□□□□□ -1.84
PDLIM1O00151 RPAP2P1-201ENST00000603626 1168 ntBASIC3.58□□□□□ -1.84
PDLIM1O00151 AC067959.1-201ENST00000604334 379 ntBASIC3.58□□□□□ -1.84
PDLIM1O00151 AL158050.2-201ENST00000605336 568 ntBASIC3.58□□□□□ -1.84
PDLIM1O00151 AC097504.2-201ENST00000608088 454 ntBASIC3.58□□□□□ -1.84
PDLIM1O00151 MIR6868-201ENST00000611215 58 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms