Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC1.64□□□□□ -2.15
CHKB-CPT1BH3BT56 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC1.64□□□□□ -2.15
CHKB-CPT1BH3BT56 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC1.64□□□□□ -2.15
CHKB-CPT1BH3BT56 COX6CP3-201ENST00000580869 223 ntBASIC1.64□□□□□ -2.15
CHKB-CPT1BH3BT56 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC1.64□□□□□ -2.15
CHKB-CPT1BH3BT56 AC006116.10-201ENST00000591836 581 ntBASIC1.64□□□□□ -2.15
CHKB-CPT1BH3BT56 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC1.64□□□□□ -2.15
CHKB-CPT1BH3BT56 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC1.64□□□□□ -2.15
CHKB-CPT1BH3BT56 AL161756.2-201ENST00000604597 246 ntBASIC1.64□□□□□ -2.15
CHKB-CPT1BH3BT56 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
CHKB-CPT1BH3BT56 AC006329.2-201ENST00000611491 394 ntBASIC1.64□□□□□ -2.15
CHKB-CPT1BH3BT56 AC011472.4-201ENST00000615848 491 ntBASIC1.64□□□□□ -2.15
CHKB-CPT1BH3BT56 MIR3653-201ENST00000625572 110 ntBASIC1.64□□□□□ -2.15
CHKB-CPT1BH3BT56 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC1.64□□□□□ -2.15
CHKB-CPT1BH3BT56 FRG1DP-201ENST00000635586 771 ntBASIC1.64□□□□□ -2.15
CHKB-CPT1BH3BT56 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC1.64□□□□□ -2.15
CHKB-CPT1BH3BT56 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
CHKB-CPT1BH3BT56 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
CHKB-CPT1BH3BT56 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
CHKB-CPT1BH3BT56 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC1.63□□□□□ -2.15
CHKB-CPT1BH3BT56 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC1.63□□□□□ -2.15
CHKB-CPT1BH3BT56 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC1.63□□□□□ -2.15
CHKB-CPT1BH3BT56 IL33-203ENST00000456383 2501 ntTSL 5 BASIC1.63□□□□□ -2.15
CHKB-CPT1BH3BT56 ACEA_U3.1-201ENST00000363057 217 ntBASIC1.63□□□□□ -2.15
CHKB-CPT1BH3BT56 RNU6-317P-201ENST00000384031 107 ntBASIC1.63□□□□□ -2.15
CHKB-CPT1BH3BT56 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
CHKB-CPT1BH3BT56 MTCYBP24-201ENST00000420387 1106 ntBASIC1.63□□□□□ -2.15
CHKB-CPT1BH3BT56 AL137014.1-201ENST00000420490 1226 ntBASIC1.63□□□□□ -2.15
CHKB-CPT1BH3BT56 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
CHKB-CPT1BH3BT56 AC096632.1-201ENST00000427395 310 ntBASIC1.63□□□□□ -2.15
CHKB-CPT1BH3BT56 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC1.63□□□□□ -2.15
CHKB-CPT1BH3BT56 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC1.63□□□□□ -2.15
CHKB-CPT1BH3BT56 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
CHKB-CPT1BH3BT56 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC1.63□□□□□ -2.15
CHKB-CPT1BH3BT56 RPS3AP53-201ENST00000454716 778 ntBASIC1.63□□□□□ -2.15
CHKB-CPT1BH3BT56 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC1.63□□□□□ -2.15
CHKB-CPT1BH3BT56 AC005532.2-201ENST00000467154 373 ntBASIC1.63□□□□□ -2.15
CHKB-CPT1BH3BT56 AC010285.1-201ENST00000470580 392 ntBASIC1.63□□□□□ -2.15
CHKB-CPT1BH3BT56 AC041039.1-201ENST00000485656 536 ntBASIC1.63□□□□□ -2.15
CHKB-CPT1BH3BT56 AK3P4-201ENST00000504283 583 ntBASIC1.63□□□□□ -2.15
CHKB-CPT1BH3BT56 VN1R104P-201ENST00000505115 1009 ntBASIC1.63□□□□□ -2.15
CHKB-CPT1BH3BT56 AC114322.1-201ENST00000506771 926 ntBASIC1.63□□□□□ -2.15
CHKB-CPT1BH3BT56 HMGN1P11-201ENST00000508668 303 ntBASIC1.63□□□□□ -2.15
CHKB-CPT1BH3BT56 AC106872.4-201ENST00000510050 523 ntBASIC1.63□□□□□ -2.15
CHKB-CPT1BH3BT56 RAC1P5-201ENST00000512182 576 ntBASIC1.63□□□□□ -2.15
CHKB-CPT1BH3BT56 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC1.63□□□□□ -2.15
CHKB-CPT1BH3BT56 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC1.63□□□□□ -2.15
CHKB-CPT1BH3BT56 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC1.63□□□□□ -2.15
CHKB-CPT1BH3BT56 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC1.63□□□□□ -2.15
CHKB-CPT1BH3BT56 ERHP1-201ENST00000523006 310 ntBASIC1.63□□□□□ -2.15
CHKB-CPT1BH3BT56 SUB1P1-201ENST00000524415 382 ntBASIC1.63□□□□□ -2.15
CHKB-CPT1BH3BT56 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC1.63□□□□□ -2.15
CHKB-CPT1BH3BT56 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC1.63□□□□□ -2.15
CHKB-CPT1BH3BT56 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC1.63□□□□□ -2.15
CHKB-CPT1BH3BT56 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC1.63□□□□□ -2.15
CHKB-CPT1BH3BT56 MIR4646-201ENST00000580775 63 ntBASIC1.63□□□□□ -2.15
CHKB-CPT1BH3BT56 U73023.1-201ENST00000603134 700 ntBASIC1.63□□□□□ -2.15
CHKB-CPT1BH3BT56 AC015871.2-201ENST00000603605 948 ntBASIC1.63□□□□□ -2.15
CHKB-CPT1BH3BT56 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC1.63□□□□□ -2.15
CHKB-CPT1BH3BT56 AC069200.1-201ENST00000609511 323 ntBASIC1.63□□□□□ -2.15
CHKB-CPT1BH3BT56 AC245517.5-201ENST00000611529 162 ntBASIC1.63□□□□□ -2.15
CHKB-CPT1BH3BT56 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC1.63□□□□□ -2.15
CHKB-CPT1BH3BT56 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC1.63□□□□□ -2.15
CHKB-CPT1BH3BT56 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC1.63□□□□□ -2.15
CHKB-CPT1BH3BT56 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
CHKB-CPT1BH3BT56 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
CHKB-CPT1BH3BT56 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC1.62□□□□□ -2.15
CHKB-CPT1BH3BT56 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
CHKB-CPT1BH3BT56 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.62□□□□□ -2.15
CHKB-CPT1BH3BT56 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
CHKB-CPT1BH3BT56 AC009501.3-201ENST00000605001 1352 ntBASIC1.62□□□□□ -2.15
CHKB-CPT1BH3BT56 AL512283.1-201ENST00000606756 1384 ntBASIC1.62□□□□□ -2.15
CHKB-CPT1BH3BT56 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC1.62□□□□□ -2.15
CHKB-CPT1BH3BT56 CCT8P1-201ENST00000413611 1657 ntBASIC1.62□□□□□ -2.15
CHKB-CPT1BH3BT56 AL645937.1-201ENST00000641739 1652 ntBASIC1.62□□□□□ -2.15
CHKB-CPT1BH3BT56 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC1.62□□□□□ -2.15
CHKB-CPT1BH3BT56 AC079741.1-201ENST00000321498 212 ntBASIC1.62□□□□□ -2.15
CHKB-CPT1BH3BT56 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
CHKB-CPT1BH3BT56 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
CHKB-CPT1BH3BT56 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
CHKB-CPT1BH3BT56 IGKV7-3-201ENST00000357453 298 ntBASIC1.62□□□□□ -2.15
CHKB-CPT1BH3BT56 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
CHKB-CPT1BH3BT56 RNA5SP197-201ENST00000363357 119 ntBASIC1.62□□□□□ -2.15
CHKB-CPT1BH3BT56 RNA5SP139-201ENST00000364340 117 ntBASIC1.62□□□□□ -2.15
CHKB-CPT1BH3BT56 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC1.62□□□□□ -2.15
CHKB-CPT1BH3BT56 SNORA80E-201ENST00000384744 137 ntBASIC1.62□□□□□ -2.15
CHKB-CPT1BH3BT56 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
CHKB-CPT1BH3BT56 AL512633.1-201ENST00000399931 655 ntBASIC1.62□□□□□ -2.15
CHKB-CPT1BH3BT56 AC016397.1-201ENST00000412463 242 ntBASIC1.62□□□□□ -2.15
CHKB-CPT1BH3BT56 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC1.62□□□□□ -2.15
CHKB-CPT1BH3BT56 MORF4L1P6-201ENST00000418771 268 ntBASIC1.62□□□□□ -2.15
CHKB-CPT1BH3BT56 AL355433.1-201ENST00000422804 300 ntBASIC1.62□□□□□ -2.15
CHKB-CPT1BH3BT56 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC1.62□□□□□ -2.15
CHKB-CPT1BH3BT56 CBX1P1-201ENST00000440184 427 ntBASIC1.62□□□□□ -2.15
CHKB-CPT1BH3BT56 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC1.62□□□□□ -2.15
CHKB-CPT1BH3BT56 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC1.62□□□□□ -2.15
CHKB-CPT1BH3BT56 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC1.62□□□□□ -2.15
CHKB-CPT1BH3BT56 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC1.62□□□□□ -2.15
CHKB-CPT1BH3BT56 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC1.62□□□□□ -2.15
CHKB-CPT1BH3BT56 AC011753.1-201ENST00000451001 220 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms