Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
TMEM235A6NFC5 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -2
TMEM235A6NFC5 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
TMEM235A6NFC5 AL161431.1-201ENST00000618966 4205 ntBASIC2.58□□□□□ -2
TMEM235A6NFC5 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC2.58□□□□□ -2
TMEM235A6NFC5 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.58□□□□□ -2
TMEM235A6NFC5 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
TMEM235A6NFC5 MIR181B1-201ENST00000385240 110 ntBASIC2.58□□□□□ -2
TMEM235A6NFC5 SNORD67-201ENST00000390833 111 ntBASIC2.58□□□□□ -2
TMEM235A6NFC5 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC2.58□□□□□ -2
TMEM235A6NFC5 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC2.58□□□□□ -2
TMEM235A6NFC5 OR1AA1P-201ENST00000419597 916 ntBASIC2.58□□□□□ -2
TMEM235A6NFC5 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.58□□□□□ -2
TMEM235A6NFC5 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.58□□□□□ -2
TMEM235A6NFC5 HSPE1P28-201ENST00000443139 211 ntBASIC2.58□□□□□ -2
TMEM235A6NFC5 RPL34P26-201ENST00000445636 354 ntBASIC2.58□□□□□ -2
TMEM235A6NFC5 RPL7P59-201ENST00000447700 943 ntBASIC2.58□□□□□ -2
TMEM235A6NFC5 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC2.58□□□□□ -2
TMEM235A6NFC5 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.58□□□□□ -2
TMEM235A6NFC5 RPS17P11-201ENST00000474297 293 ntBASIC2.58□□□□□ -2
TMEM235A6NFC5 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC2.58□□□□□ -2
TMEM235A6NFC5 SUMO1P1-201ENST00000497904 306 ntBASIC2.58□□□□□ -2
TMEM235A6NFC5 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC2.58□□□□□ -2
TMEM235A6NFC5 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC2.58□□□□□ -2
TMEM235A6NFC5 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC2.58□□□□□ -2
TMEM235A6NFC5 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC2.58□□□□□ -2
TMEM235A6NFC5 AC093770.1-201ENST00000511559 571 ntBASIC2.58□□□□□ -2
TMEM235A6NFC5 SNORA31.26-201ENST00000517250 137 ntBASIC2.58□□□□□ -2
TMEM235A6NFC5 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC2.58□□□□□ -2
TMEM235A6NFC5 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC2.58□□□□□ -2
TMEM235A6NFC5 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC2.58□□□□□ -2
TMEM235A6NFC5 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.58□□□□□ -2
TMEM235A6NFC5 AC007458.1-201ENST00000542812 373 ntBASIC2.58□□□□□ -2
TMEM235A6NFC5 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.58□□□□□ -2
TMEM235A6NFC5 AL049870.4-201ENST00000555741 486 ntBASIC2.58□□□□□ -2
TMEM235A6NFC5 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC2.58□□□□□ -2
TMEM235A6NFC5 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC2.58□□□□□ -2
TMEM235A6NFC5 LLPHP1-201ENST00000603571 367 ntBASIC2.58□□□□□ -2
TMEM235A6NFC5 AC121761.2-201ENST00000617300 689 ntBASIC2.58□□□□□ -2
TMEM235A6NFC5 U6.48-201ENST00000618523 106 ntBASIC2.58□□□□□ -2
TMEM235A6NFC5 LINC00216-201ENST00000623548 1126 ntBASIC2.58□□□□□ -2
TMEM235A6NFC5 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC2.58□□□□□ -2
TMEM235A6NFC5 AC138649.5-201ENST00000637456 137 ntBASIC2.58□□□□□ -2
TMEM235A6NFC5 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.58□□□□□ -2
TMEM235A6NFC5 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
TMEM235A6NFC5 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
TMEM235A6NFC5 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
TMEM235A6NFC5 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.58□□□□□ -2
TMEM235A6NFC5 AC093010.3-201ENST00000570269 15214 ntBASIC2.58□□□□□ -2
TMEM235A6NFC5 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
TMEM235A6NFC5 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.58□□□□□ -2
TMEM235A6NFC5 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.57□□□□□ -2
TMEM235A6NFC5 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC2.57□□□□□ -2
TMEM235A6NFC5 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.57□□□□□ -2
TMEM235A6NFC5 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC2.57□□□□□ -2
TMEM235A6NFC5 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
TMEM235A6NFC5 AC073325.2-201ENST00000339545 159 ntBASIC2.57□□□□□ -2
TMEM235A6NFC5 OR6K3-202ENST00000368146 996 ntBASIC2.57□□□□□ -2
TMEM235A6NFC5 HSPE1P26-201ENST00000405341 275 ntBASIC2.57□□□□□ -2
TMEM235A6NFC5 RPS29P4-201ENST00000414733 161 ntBASIC2.57□□□□□ -2
TMEM235A6NFC5 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.57□□□□□ -2
TMEM235A6NFC5 AL451074.5-201ENST00000415894 435 ntBASIC2.57□□□□□ -2
TMEM235A6NFC5 RPL31P45-201ENST00000419532 356 ntBASIC2.57□□□□□ -2
TMEM235A6NFC5 MTND2P16-201ENST00000419987 799 ntBASIC2.57□□□□□ -2
TMEM235A6NFC5 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC2.57□□□□□ -2
TMEM235A6NFC5 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC2.57□□□□□ -2
TMEM235A6NFC5 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC2.57□□□□□ -2
TMEM235A6NFC5 RPL39P40-201ENST00000445481 146 ntBASIC2.57□□□□□ -2
TMEM235A6NFC5 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.57□□□□□ -2
TMEM235A6NFC5 HMGN2P21-201ENST00000447764 270 ntBASIC2.57□□□□□ -2
TMEM235A6NFC5 SLC31A1P1-201ENST00000451221 567 ntBASIC2.57□□□□□ -2
TMEM235A6NFC5 AC096992.1-201ENST00000459808 709 ntBASIC2.57□□□□□ -2
TMEM235A6NFC5 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC2.57□□□□□ -2
TMEM235A6NFC5 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC2.57□□□□□ -2
TMEM235A6NFC5 RN7SKP82-201ENST00000516786 223 ntBASIC2.57□□□□□ -2
TMEM235A6NFC5 RN7SKP234-201ENST00000517173 224 ntBASIC2.57□□□□□ -2
TMEM235A6NFC5 IGKV3OR22-2-201ENST00000517943 313 ntBASIC2.57□□□□□ -2
TMEM235A6NFC5 RN7SL339P-201ENST00000580597 296 ntBASIC2.57□□□□□ -2
TMEM235A6NFC5 AC105429.2-201ENST00000610567 517 ntBASIC2.57□□□□□ -2
TMEM235A6NFC5 MESTIT1_2.1-201ENST00000616328 235 ntBASIC2.57□□□□□ -2
TMEM235A6NFC5 AL355365.1-201ENST00000616480 294 ntBASIC2.57□□□□□ -2
TMEM235A6NFC5 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC2.57□□□□□ -2
TMEM235A6NFC5 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
TMEM235A6NFC5 AC110774.1-201ENST00000623567 2018 ntBASIC2.57□□□□□ -2
TMEM235A6NFC5 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
TMEM235A6NFC5 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
TMEM235A6NFC5 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC2.56□□□□□ -2
TMEM235A6NFC5 RNA5SP50-201ENST00000363731 107 ntBASIC2.56□□□□□ -2
TMEM235A6NFC5 RNA5SP167-201ENST00000365461 116 ntBASIC2.56□□□□□ -2
TMEM235A6NFC5 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
TMEM235A6NFC5 SNORD15B-201ENST00000384714 146 ntBASIC2.56□□□□□ -2
TMEM235A6NFC5 MIR7-1-201ENST00000384871 110 ntBASIC2.56□□□□□ -2
TMEM235A6NFC5 HMGB1P10-201ENST00000395823 563 ntBASIC2.56□□□□□ -2
TMEM235A6NFC5 RPL7P25-201ENST00000404151 721 ntBASIC2.56□□□□□ -2
TMEM235A6NFC5 HNRNPDP2-201ENST00000406475 478 ntBASIC2.56□□□□□ -2
TMEM235A6NFC5 MTATP6P31-201ENST00000406985 692 ntBASIC2.56□□□□□ -2
TMEM235A6NFC5 RNU6ATAC-201ENST00000408749 126 ntBASIC2.56□□□□□ -2
TMEM235A6NFC5 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC2.56□□□□□ -2
TMEM235A6NFC5 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC2.56□□□□□ -2
TMEM235A6NFC5 AC016696.1-201ENST00000446949 318 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms