Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HRH3Q9Y5N1 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HRH3Q9Y5N1 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HRH3Q9Y5N1 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HRH3Q9Y5N1 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
HRH3Q9Y5N1 SAGE3P-201ENST00000619800 1635 ntBASIC5.92□□□□□ -1.46
HRH3Q9Y5N1 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.92□□□□□ -1.46
HRH3Q9Y5N1 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HRH3Q9Y5N1 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC5.91□□□□□ -1.46
HRH3Q9Y5N1 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC5.91□□□□□ -1.46
HRH3Q9Y5N1 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
HRH3Q9Y5N1 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.91□□□□□ -1.46
HRH3Q9Y5N1 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HRH3Q9Y5N1 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
HRH3Q9Y5N1 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
HRH3Q9Y5N1 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
HRH3Q9Y5N1 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
HRH3Q9Y5N1 SNORD14.1-201ENST00000365609 90 ntBASIC5.91□□□□□ -1.46
HRH3Q9Y5N1 RNU6-1293P-201ENST00000384077 107 ntBASIC5.91□□□□□ -1.46
HRH3Q9Y5N1 RNU6-214P-201ENST00000384130 107 ntBASIC5.91□□□□□ -1.46
HRH3Q9Y5N1 Y_RNA.485-201ENST00000384395 102 ntBASIC5.91□□□□□ -1.46
HRH3Q9Y5N1 RNU6-393P-201ENST00000384475 107 ntBASIC5.91□□□□□ -1.46
HRH3Q9Y5N1 RNU6-33P-201ENST00000384793 107 ntBASIC5.91□□□□□ -1.46
HRH3Q9Y5N1 MIR1252-201ENST00000408861 65 ntBASIC5.91□□□□□ -1.46
HRH3Q9Y5N1 RN7SKP159-201ENST00000410657 292 ntBASIC5.91□□□□□ -1.46
HRH3Q9Y5N1 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC5.91□□□□□ -1.46
HRH3Q9Y5N1 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC5.91□□□□□ -1.46
HRH3Q9Y5N1 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.91□□□□□ -1.46
HRH3Q9Y5N1 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC5.91□□□□□ -1.46
HRH3Q9Y5N1 AL590632.1-201ENST00000424289 371 ntBASIC5.91□□□□□ -1.46
HRH3Q9Y5N1 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5.91□□□□□ -1.46
HRH3Q9Y5N1 AC115283.1-201ENST00000427353 400 ntBASIC5.91□□□□□ -1.46
HRH3Q9Y5N1 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.91□□□□□ -1.46
HRH3Q9Y5N1 HMGB1P9-201ENST00000429856 646 ntBASIC5.91□□□□□ -1.46
HRH3Q9Y5N1 MRPS18BP2-201ENST00000434310 759 ntBASIC5.91□□□□□ -1.46
HRH3Q9Y5N1 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.91□□□□□ -1.46
HRH3Q9Y5N1 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC5.91□□□□□ -1.46
HRH3Q9Y5N1 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC5.91□□□□□ -1.46
HRH3Q9Y5N1 CYCSP24-201ENST00000445119 316 ntBASIC5.91□□□□□ -1.46
HRH3Q9Y5N1 AC112492.4-201ENST00000456549 352 ntBASIC5.91□□□□□ -1.46
HRH3Q9Y5N1 SNORD5.1-201ENST00000458800 75 ntBASIC5.91□□□□□ -1.46
HRH3Q9Y5N1 AC092824.1-201ENST00000483524 576 ntBASIC5.91□□□□□ -1.46
HRH3Q9Y5N1 RN7SL432P-201ENST00000484057 298 ntBASIC5.91□□□□□ -1.46
HRH3Q9Y5N1 SNORA58-201ENST00000505219 137 ntBASIC5.91□□□□□ -1.46
HRH3Q9Y5N1 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC5.91□□□□□ -1.46
HRH3Q9Y5N1 AC096745.1-201ENST00000509945 370 ntBASIC5.91□□□□□ -1.46
HRH3Q9Y5N1 IL7R-208ENST00000511982 612 ntTSL 2 BASIC5.91□□□□□ -1.46
HRH3Q9Y5N1 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.91□□□□□ -1.46
HRH3Q9Y5N1 RNU4-77P-201ENST00000516692 156 ntBASIC5.91□□□□□ -1.46
HRH3Q9Y5N1 RNU6-685P-201ENST00000517088 95 ntBASIC5.91□□□□□ -1.46
HRH3Q9Y5N1 IGHV3-76-201ENST00000522465 295 ntBASIC5.91□□□□□ -1.46
HRH3Q9Y5N1 IGLV3-6-201ENST00000523937 250 ntBASIC5.91□□□□□ -1.46
HRH3Q9Y5N1 TRIM77BP-201ENST00000524985 1119 ntBASIC5.91□□□□□ -1.46
HRH3Q9Y5N1 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.91□□□□□ -1.46
HRH3Q9Y5N1 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC5.91□□□□□ -1.46
HRH3Q9Y5N1 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC5.91□□□□□ -1.46
HRH3Q9Y5N1 TOMM20P1-201ENST00000534518 427 ntBASIC5.91□□□□□ -1.46
HRH3Q9Y5N1 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.91□□□□□ -1.46
HRH3Q9Y5N1 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC5.91□□□□□ -1.46
HRH3Q9Y5N1 RN7SL208P-201ENST00000577964 296 ntBASIC5.91□□□□□ -1.46
HRH3Q9Y5N1 AL670379.6-201ENST00000603753 252 ntBASIC5.91□□□□□ -1.46
HRH3Q9Y5N1 AL670379.1-201ENST00000604752 252 ntBASIC5.91□□□□□ -1.46
HRH3Q9Y5N1 AL670379.5-201ENST00000605253 252 ntBASIC5.91□□□□□ -1.46
HRH3Q9Y5N1 AL670379.8-201ENST00000605353 252 ntBASIC5.91□□□□□ -1.46
HRH3Q9Y5N1 AL670379.7-201ENST00000605823 252 ntBASIC5.91□□□□□ -1.46
HRH3Q9Y5N1 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HRH3Q9Y5N1 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.91□□□□□ -1.46
HRH3Q9Y5N1 MIR7854-201ENST00000620068 65 ntBASIC5.91□□□□□ -1.46
HRH3Q9Y5N1 AP001264.1-201ENST00000620602 703 ntBASIC5.91□□□□□ -1.46
HRH3Q9Y5N1 RNU6-156P-201ENST00000621869 107 ntBASIC5.91□□□□□ -1.46
HRH3Q9Y5N1 AL161637.1-201ENST00000622380 412 ntBASIC5.91□□□□□ -1.46
HRH3Q9Y5N1 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.91□□□□□ -1.46
HRH3Q9Y5N1 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.91□□□□□ -1.46
HRH3Q9Y5N1 LINC02495-203ENST00000636704 242 ntBASIC5.91□□□□□ -1.46
HRH3Q9Y5N1 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.91□□□□□ -1.46
HRH3Q9Y5N1 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC5.91□□□□□ -1.46
HRH3Q9Y5N1 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC5.91□□□□□ -1.46
HRH3Q9Y5N1 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
HRH3Q9Y5N1 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
HRH3Q9Y5N1 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HRH3Q9Y5N1 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HRH3Q9Y5N1 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HRH3Q9Y5N1 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HRH3Q9Y5N1 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HRH3Q9Y5N1 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HRH3Q9Y5N1 TNPO1P2-201ENST00000426249 2665 ntBASIC5.91□□□□□ -1.46
HRH3Q9Y5N1 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
HRH3Q9Y5N1 AC010615.1-201ENST00000594254 1764 ntBASIC5.9□□□□□ -1.46
HRH3Q9Y5N1 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
HRH3Q9Y5N1 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.9□□□□□ -1.46
HRH3Q9Y5N1 AC015799.1-201ENST00000622996 3122 ntBASIC5.9□□□□□ -1.46
HRH3Q9Y5N1 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.9□□□□□ -1.46
HRH3Q9Y5N1 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
HRH3Q9Y5N1 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
HRH3Q9Y5N1 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC5.9□□□□□ -1.46
HRH3Q9Y5N1 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC5.9□□□□□ -1.46
HRH3Q9Y5N1 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
HRH3Q9Y5N1 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
HRH3Q9Y5N1 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
HRH3Q9Y5N1 CASC19-246ENST00000641625 1606 ntBASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms