Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.92□□□□□ -1.78
PCDHGA1Q9Y5H4 RNU6-276P-201ENST00000516114 96 ntBASIC3.92□□□□□ -1.78
PCDHGA1Q9Y5H4 SNORA19.3-201ENST00000516165 130 ntBASIC3.92□□□□□ -1.78
PCDHGA1Q9Y5H4 RNU1-95P-201ENST00000516357 160 ntBASIC3.92□□□□□ -1.78
PCDHGA1Q9Y5H4 RNU1-128P-201ENST00000516704 160 ntBASIC3.92□□□□□ -1.78
PCDHGA1Q9Y5H4 ZNF705CP-201ENST00000530515 889 ntBASIC3.92□□□□□ -1.78
PCDHGA1Q9Y5H4 AC100770.1-201ENST00000532310 322 ntBASIC3.92□□□□□ -1.78
PCDHGA1Q9Y5H4 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.92□□□□□ -1.78
PCDHGA1Q9Y5H4 ZKSCAN7P1-201ENST00000543668 673 ntBASIC3.92□□□□□ -1.78
PCDHGA1Q9Y5H4 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.92□□□□□ -1.78
PCDHGA1Q9Y5H4 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC3.92□□□□□ -1.78
PCDHGA1Q9Y5H4 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC3.92□□□□□ -1.78
PCDHGA1Q9Y5H4 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.92□□□□□ -1.78
PCDHGA1Q9Y5H4 AC090330.1-201ENST00000588646 764 ntBASIC3.92□□□□□ -1.78
PCDHGA1Q9Y5H4 SRGNP1-201ENST00000603392 451 ntBASIC3.92□□□□□ -1.78
PCDHGA1Q9Y5H4 AC011458.1-201ENST00000604034 617 ntBASIC3.92□□□□□ -1.78
PCDHGA1Q9Y5H4 MIR6868-201ENST00000611215 58 ntBASIC3.92□□□□□ -1.78
PCDHGA1Q9Y5H4 AP003485.1-201ENST00000625093 753 ntBASIC3.92□□□□□ -1.78
PCDHGA1Q9Y5H4 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.92□□□□□ -1.78
PCDHGA1Q9Y5H4 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
PCDHGA1Q9Y5H4 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PCDHGA1Q9Y5H4 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
PCDHGA1Q9Y5H4 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.92□□□□□ -1.78
PCDHGA1Q9Y5H4 AC105074.1-201ENST00000623380 3095 ntBASIC3.92□□□□□ -1.78
PCDHGA1Q9Y5H4 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PCDHGA1Q9Y5H4 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PCDHGA1Q9Y5H4 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
PCDHGA1Q9Y5H4 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PCDHGA1Q9Y5H4 AL031985.3-201ENST00000565390 2449 ntBASIC3.91□□□□□ -1.78
PCDHGA1Q9Y5H4 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PCDHGA1Q9Y5H4 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
PCDHGA1Q9Y5H4 SNORD6-201ENST00000365444 73 ntBASIC3.91□□□□□ -1.78
PCDHGA1Q9Y5H4 RHOT1P2-201ENST00000366423 333 ntBASIC3.91□□□□□ -1.78
PCDHGA1Q9Y5H4 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.91□□□□□ -1.78
PCDHGA1Q9Y5H4 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
PCDHGA1Q9Y5H4 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
PCDHGA1Q9Y5H4 MIR607-201ENST00000385241 96 ntBASIC3.91□□□□□ -1.78
PCDHGA1Q9Y5H4 MTCO1P56-201ENST00000401674 224 ntBASIC3.91□□□□□ -1.78
PCDHGA1Q9Y5H4 AL139098.1-201ENST00000407291 389 ntBASIC3.91□□□□□ -1.78
PCDHGA1Q9Y5H4 AL023807.1-201ENST00000407932 359 ntBASIC3.91□□□□□ -1.78
PCDHGA1Q9Y5H4 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC3.91□□□□□ -1.78
PCDHGA1Q9Y5H4 RN7SKP167-201ENST00000411047 285 ntBASIC3.91□□□□□ -1.78
PCDHGA1Q9Y5H4 MTND4P3-201ENST00000417829 541 ntBASIC3.91□□□□□ -1.78
PCDHGA1Q9Y5H4 AC009237.2-201ENST00000421358 284 ntBASIC3.91□□□□□ -1.78
PCDHGA1Q9Y5H4 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.91□□□□□ -1.78
PCDHGA1Q9Y5H4 AC093698.1-201ENST00000423843 571 ntBASIC3.91□□□□□ -1.78
PCDHGA1Q9Y5H4 AC091390.3-201ENST00000426478 338 ntBASIC3.91□□□□□ -1.78
PCDHGA1Q9Y5H4 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.91□□□□□ -1.78
PCDHGA1Q9Y5H4 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.91□□□□□ -1.78
PCDHGA1Q9Y5H4 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.91□□□□□ -1.78
PCDHGA1Q9Y5H4 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.91□□□□□ -1.78
PCDHGA1Q9Y5H4 AL353748.1-201ENST00000440753 474 ntBASIC3.91□□□□□ -1.78
PCDHGA1Q9Y5H4 RPS4XP4-201ENST00000443195 763 ntBASIC3.91□□□□□ -1.78
PCDHGA1Q9Y5H4 ELOCP13-201ENST00000443934 329 ntBASIC3.91□□□□□ -1.78
PCDHGA1Q9Y5H4 NPM1P49-201ENST00000448027 714 ntBASIC3.91□□□□□ -1.78
PCDHGA1Q9Y5H4 NANOGP10-201ENST00000453325 895 ntBASIC3.91□□□□□ -1.78
PCDHGA1Q9Y5H4 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.91□□□□□ -1.78
PCDHGA1Q9Y5H4 MTCO3P2-201ENST00000457365 171 ntBASIC3.91□□□□□ -1.78
PCDHGA1Q9Y5H4 SNRPGP3-201ENST00000469405 227 ntBASIC3.91□□□□□ -1.78
PCDHGA1Q9Y5H4 RPS4XP15-201ENST00000489210 795 ntBASIC3.91□□□□□ -1.78
PCDHGA1Q9Y5H4 RN7SL323P-201ENST00000494712 295 ntBASIC3.91□□□□□ -1.78
PCDHGA1Q9Y5H4 AC025445.1-201ENST00000502728 300 ntBASIC3.91□□□□□ -1.78
PCDHGA1Q9Y5H4 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PCDHGA1Q9Y5H4 AC011352.3-201ENST00000505162 593 ntBASIC3.91□□□□□ -1.78
PCDHGA1Q9Y5H4 BOLA3P3-201ENST00000505182 232 ntBASIC3.91□□□□□ -1.78
PCDHGA1Q9Y5H4 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PCDHGA1Q9Y5H4 AC093752.1-206ENST00000511823 336 ntBASIC3.91□□□□□ -1.78
PCDHGA1Q9Y5H4 SCARNA1-201ENST00000517138 166 ntBASIC3.91□□□□□ -1.78
PCDHGA1Q9Y5H4 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.91□□□□□ -1.78
PCDHGA1Q9Y5H4 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.91□□□□□ -1.78
PCDHGA1Q9Y5H4 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.91□□□□□ -1.78
PCDHGA1Q9Y5H4 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PCDHGA1Q9Y5H4 MTCO3P15-201ENST00000526563 574 ntBASIC3.91□□□□□ -1.78
PCDHGA1Q9Y5H4 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PCDHGA1Q9Y5H4 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.91□□□□□ -1.78
PCDHGA1Q9Y5H4 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.91□□□□□ -1.78
PCDHGA1Q9Y5H4 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.91□□□□□ -1.78
PCDHGA1Q9Y5H4 ZNF192P1-203ENST00000565888 810 ntBASIC3.91□□□□□ -1.78
PCDHGA1Q9Y5H4 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.91□□□□□ -1.78
PCDHGA1Q9Y5H4 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
PCDHGA1Q9Y5H4 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.91□□□□□ -1.78
PCDHGA1Q9Y5H4 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.91□□□□□ -1.78
PCDHGA1Q9Y5H4 AP003973.1-201ENST00000604639 691 ntBASIC3.91□□□□□ -1.78
PCDHGA1Q9Y5H4 AC024060.1-201ENST00000607052 494 ntBASIC3.91□□□□□ -1.78
PCDHGA1Q9Y5H4 AC103710.3-201ENST00000608157 948 ntBASIC3.91□□□□□ -1.78
PCDHGA1Q9Y5H4 AP000238.1-201ENST00000608759 426 ntBASIC3.91□□□□□ -1.78
PCDHGA1Q9Y5H4 AL121652.1-201ENST00000608851 448 ntBASIC3.91□□□□□ -1.78
PCDHGA1Q9Y5H4 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC3.91□□□□□ -1.78
PCDHGA1Q9Y5H4 AL138721.1-201ENST00000616756 179 ntBASIC3.91□□□□□ -1.78
PCDHGA1Q9Y5H4 AC104985.3-201ENST00000623479 597 ntBASIC3.91□□□□□ -1.78
PCDHGA1Q9Y5H4 AC010608.3-201ENST00000625048 527 ntBASIC3.91□□□□□ -1.78
PCDHGA1Q9Y5H4 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.91□□□□□ -1.78
PCDHGA1Q9Y5H4 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PCDHGA1Q9Y5H4 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PCDHGA1Q9Y5H4 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
PCDHGA1Q9Y5H4 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
PCDHGA1Q9Y5H4 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
PCDHGA1Q9Y5H4 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
PCDHGA1Q9Y5H4 ZNF285B-201ENST00000561698 1767 ntBASIC3.9□□□□□ -1.79
PCDHGA1Q9Y5H4 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 150.5 ms