Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 LAMTOR5P1-201ENST00000444290 270 ntBASIC6.03□□□□□ -1.44
PCDHGA11Q9Y5H2 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.03□□□□□ -1.44
PCDHGA11Q9Y5H2 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PCDHGA11Q9Y5H2 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC6.03□□□□□ -1.44
PCDHGA11Q9Y5H2 RPS18P1-201ENST00000447840 458 ntBASIC6.03□□□□□ -1.44
PCDHGA11Q9Y5H2 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.03□□□□□ -1.44
PCDHGA11Q9Y5H2 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC6.03□□□□□ -1.44
PCDHGA11Q9Y5H2 RN7SL39P-201ENST00000462264 297 ntBASIC6.03□□□□□ -1.44
PCDHGA11Q9Y5H2 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC6.03□□□□□ -1.44
PCDHGA11Q9Y5H2 AC053481.1-201ENST00000467217 306 ntBASIC6.03□□□□□ -1.44
PCDHGA11Q9Y5H2 RN7SL432P-201ENST00000484057 298 ntBASIC6.03□□□□□ -1.44
PCDHGA11Q9Y5H2 GM2AP2-201ENST00000491764 562 ntBASIC6.03□□□□□ -1.44
PCDHGA11Q9Y5H2 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC6.03□□□□□ -1.44
PCDHGA11Q9Y5H2 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC6.03□□□□□ -1.44
PCDHGA11Q9Y5H2 RNU1-54P-201ENST00000517181 120 ntBASIC6.03□□□□□ -1.44
PCDHGA11Q9Y5H2 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.03□□□□□ -1.44
PCDHGA11Q9Y5H2 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.03□□□□□ -1.44
PCDHGA11Q9Y5H2 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.03□□□□□ -1.44
PCDHGA11Q9Y5H2 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC6.03□□□□□ -1.44
PCDHGA11Q9Y5H2 RN7SL66P-201ENST00000582099 264 ntBASIC6.03□□□□□ -1.44
PCDHGA11Q9Y5H2 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC6.03□□□□□ -1.44
PCDHGA11Q9Y5H2 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC6.03□□□□□ -1.44
PCDHGA11Q9Y5H2 AC073539.2-201ENST00000597113 165 ntBASIC6.03□□□□□ -1.44
PCDHGA11Q9Y5H2 AL138889.2-201ENST00000603883 242 ntBASIC6.03□□□□□ -1.44
PCDHGA11Q9Y5H2 MIR6885-201ENST00000612241 66 ntBASIC6.03□□□□□ -1.44
PCDHGA11Q9Y5H2 DUSP12P1-201ENST00000612874 516 ntBASIC6.03□□□□□ -1.44
PCDHGA11Q9Y5H2 AL021918.2-201ENST00000613415 194 ntBASIC6.03□□□□□ -1.44
PCDHGA11Q9Y5H2 AC004696.1-201ENST00000614345 607 ntBASIC6.03□□□□□ -1.44
PCDHGA11Q9Y5H2 AC092608.2-201ENST00000624427 218 ntBASIC6.03□□□□□ -1.44
PCDHGA11Q9Y5H2 AC091925.2-201ENST00000625059 256 ntBASIC6.03□□□□□ -1.44
PCDHGA11Q9Y5H2 NAA50-211ENST00000630058 177 ntTSL 5 BASIC6.03□□□□□ -1.44
PCDHGA11Q9Y5H2 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PCDHGA11Q9Y5H2 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.03□□□□□ -1.44
PCDHGA11Q9Y5H2 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PCDHGA11Q9Y5H2 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.03□□□□□ -1.44
PCDHGA11Q9Y5H2 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PCDHGA11Q9Y5H2 AP001541.1-201ENST00000623322 1904 ntBASIC6.03□□□□□ -1.44
PCDHGA11Q9Y5H2 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
PCDHGA11Q9Y5H2 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PCDHGA11Q9Y5H2 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.44
PCDHGA11Q9Y5H2 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC6.02□□□□□ -1.44
PCDHGA11Q9Y5H2 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
PCDHGA11Q9Y5H2 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.02□□□□□ -1.45
PCDHGA11Q9Y5H2 UQCRC2P1-201ENST00000417777 1332 ntBASIC6.02□□□□□ -1.45
PCDHGA11Q9Y5H2 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.02□□□□□ -1.45
PCDHGA11Q9Y5H2 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
PCDHGA11Q9Y5H2 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
PCDHGA11Q9Y5H2 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
PCDHGA11Q9Y5H2 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC6.02□□□□□ -1.45
PCDHGA11Q9Y5H2 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
PCDHGA11Q9Y5H2 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
PCDHGA11Q9Y5H2 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
PCDHGA11Q9Y5H2 RNU6-637P-201ENST00000384050 107 ntBASIC6.02□□□□□ -1.45
PCDHGA11Q9Y5H2 SNORD51-201ENST00000384320 80 ntBASIC6.02□□□□□ -1.45
PCDHGA11Q9Y5H2 MIR551B-201ENST00000384984 96 ntBASIC6.02□□□□□ -1.45
PCDHGA11Q9Y5H2 RNU6-754P-201ENST00000391166 107 ntBASIC6.02□□□□□ -1.45
PCDHGA11Q9Y5H2 U3.29-201ENST00000391296 212 ntBASIC6.02□□□□□ -1.45
PCDHGA11Q9Y5H2 RNU2-50P-201ENST00000410494 143 ntBASIC6.02□□□□□ -1.45
PCDHGA11Q9Y5H2 RNU4-6P-201ENST00000410804 122 ntBASIC6.02□□□□□ -1.45
PCDHGA11Q9Y5H2 BX682237.1-201ENST00000415016 335 ntBASIC6.02□□□□□ -1.45
PCDHGA11Q9Y5H2 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC6.02□□□□□ -1.45
PCDHGA11Q9Y5H2 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC6.02□□□□□ -1.45
PCDHGA11Q9Y5H2 AC093151.1-201ENST00000427711 313 ntBASIC6.02□□□□□ -1.45
PCDHGA11Q9Y5H2 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.02□□□□□ -1.45
PCDHGA11Q9Y5H2 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC6.02□□□□□ -1.45
PCDHGA11Q9Y5H2 CYCSP12-201ENST00000437729 300 ntBASIC6.02□□□□□ -1.45
PCDHGA11Q9Y5H2 RPL21P23-201ENST00000446654 460 ntBASIC6.02□□□□□ -1.45
PCDHGA11Q9Y5H2 COX4I1P2-201ENST00000447446 547 ntBASIC6.02□□□□□ -1.45
PCDHGA11Q9Y5H2 YWHAEP1-201ENST00000453697 763 ntBASIC6.02□□□□□ -1.45
PCDHGA11Q9Y5H2 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.02□□□□□ -1.45
PCDHGA11Q9Y5H2 RPL5P30-201ENST00000465511 891 ntBASIC6.02□□□□□ -1.45
PCDHGA11Q9Y5H2 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC6.02□□□□□ -1.45
PCDHGA11Q9Y5H2 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC6.02□□□□□ -1.45
PCDHGA11Q9Y5H2 RPS27P20-201ENST00000492051 246 ntBASIC6.02□□□□□ -1.45
PCDHGA11Q9Y5H2 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC6.02□□□□□ -1.45
PCDHGA11Q9Y5H2 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC6.02□□□□□ -1.45
PCDHGA11Q9Y5H2 RNU6-27P-201ENST00000516146 107 ntBASIC6.02□□□□□ -1.45
PCDHGA11Q9Y5H2 AC100870.1-201ENST00000522035 505 ntBASIC6.02□□□□□ -1.45
PCDHGA11Q9Y5H2 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC6.02□□□□□ -1.45
PCDHGA11Q9Y5H2 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
PCDHGA11Q9Y5H2 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC6.02□□□□□ -1.45
PCDHGA11Q9Y5H2 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC6.02□□□□□ -1.45
PCDHGA11Q9Y5H2 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
PCDHGA11Q9Y5H2 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC6.02□□□□□ -1.45
PCDHGA11Q9Y5H2 AL031320.1-201ENST00000604177 357 ntBASIC6.02□□□□□ -1.45
PCDHGA11Q9Y5H2 AL354984.3-201ENST00000604803 325 ntBASIC6.02□□□□□ -1.45
PCDHGA11Q9Y5H2 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.02□□□□□ -1.45
PCDHGA11Q9Y5H2 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
PCDHGA11Q9Y5H2 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
PCDHGA11Q9Y5H2 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
PCDHGA11Q9Y5H2 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.02□□□□□ -1.45
PCDHGA11Q9Y5H2 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
PCDHGA11Q9Y5H2 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
PCDHGA11Q9Y5H2 AC093775.1-201ENST00000624154 1868 ntBASIC6.02□□□□□ -1.45
PCDHGA11Q9Y5H2 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
PCDHGA11Q9Y5H2 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
PCDHGA11Q9Y5H2 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
PCDHGA11Q9Y5H2 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.01□□□□□ -1.45
PCDHGA11Q9Y5H2 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
PCDHGA11Q9Y5H2 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms