Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 MIR5692C1-201ENST00000585309 91 ntBASIC6.14□□□□□ -1.43
PCDHB11Q9Y5F2 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC6.14□□□□□ -1.43
PCDHB11Q9Y5F2 AC005332.4-201ENST00000592752 579 ntBASIC6.14□□□□□ -1.43
PCDHB11Q9Y5F2 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PCDHB11Q9Y5F2 IGKV1OR2-118-201ENST00000603238 347 ntBASIC6.14□□□□□ -1.43
PCDHB11Q9Y5F2 ATP1B3P1-201ENST00000605365 821 ntBASIC6.14□□□□□ -1.43
PCDHB11Q9Y5F2 AL021918.2-201ENST00000613415 194 ntBASIC6.14□□□□□ -1.43
PCDHB11Q9Y5F2 MIR6864-201ENST00000617935 70 ntBASIC6.14□□□□□ -1.43
PCDHB11Q9Y5F2 AC129915.3-201ENST00000634128 948 ntBASIC6.14□□□□□ -1.43
PCDHB11Q9Y5F2 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.14□□□□□ -1.43
PCDHB11Q9Y5F2 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.14□□□□□ -1.43
PCDHB11Q9Y5F2 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
PCDHB11Q9Y5F2 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
PCDHB11Q9Y5F2 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PCDHB11Q9Y5F2 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
PCDHB11Q9Y5F2 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PCDHB11Q9Y5F2 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6.14□□□□□ -1.43
PCDHB11Q9Y5F2 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PCDHB11Q9Y5F2 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
PCDHB11Q9Y5F2 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.14□□□□□ -1.43
PCDHB11Q9Y5F2 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PCDHB11Q9Y5F2 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PCDHB11Q9Y5F2 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PCDHB11Q9Y5F2 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PCDHB11Q9Y5F2 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.13□□□□□ -1.43
PCDHB11Q9Y5F2 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PCDHB11Q9Y5F2 EXOC5P1-201ENST00000510543 1969 ntBASIC6.13□□□□□ -1.43
PCDHB11Q9Y5F2 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
PCDHB11Q9Y5F2 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
PCDHB11Q9Y5F2 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
PCDHB11Q9Y5F2 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PCDHB11Q9Y5F2 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
PCDHB11Q9Y5F2 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
PCDHB11Q9Y5F2 RNU6-1078P-201ENST00000364522 103 ntBASIC6.13□□□□□ -1.43
PCDHB11Q9Y5F2 RNA5SP510-201ENST00000364697 99 ntBASIC6.13□□□□□ -1.43
PCDHB11Q9Y5F2 AL583834.1-201ENST00000406943 343 ntBASIC6.13□□□□□ -1.43
PCDHB11Q9Y5F2 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC6.13□□□□□ -1.43
PCDHB11Q9Y5F2 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC6.13□□□□□ -1.43
PCDHB11Q9Y5F2 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PCDHB11Q9Y5F2 AC127537.2-201ENST00000439258 465 ntBASIC6.13□□□□□ -1.43
PCDHB11Q9Y5F2 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC6.13□□□□□ -1.43
PCDHB11Q9Y5F2 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC6.13□□□□□ -1.43
PCDHB11Q9Y5F2 SETP20-201ENST00000457046 852 ntBASIC6.13□□□□□ -1.43
PCDHB11Q9Y5F2 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC6.13□□□□□ -1.43
PCDHB11Q9Y5F2 RN7SL369P-201ENST00000477138 299 ntBASIC6.13□□□□□ -1.43
PCDHB11Q9Y5F2 RPL12P30-201ENST00000488389 499 ntBASIC6.13□□□□□ -1.43
PCDHB11Q9Y5F2 RPL30P11-201ENST00000495304 339 ntBASIC6.13□□□□□ -1.43
PCDHB11Q9Y5F2 LSM3P4-201ENST00000502948 309 ntBASIC6.13□□□□□ -1.43
PCDHB11Q9Y5F2 KHDC1P1-201ENST00000511053 508 ntBASIC6.13□□□□□ -1.43
PCDHB11Q9Y5F2 AC021146.3-201ENST00000511911 260 ntBASIC6.13□□□□□ -1.43
PCDHB11Q9Y5F2 AC060775.1-201ENST00000518241 520 ntBASIC6.13□□□□□ -1.43
PCDHB11Q9Y5F2 AC105031.1-201ENST00000518550 476 ntBASIC6.13□□□□□ -1.43
PCDHB11Q9Y5F2 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC6.13□□□□□ -1.43
PCDHB11Q9Y5F2 IGKV3D-34-201ENST00000522638 302 ntBASIC6.13□□□□□ -1.43
PCDHB11Q9Y5F2 AC022882.1-201ENST00000532142 501 ntBASIC6.13□□□□□ -1.43
PCDHB11Q9Y5F2 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PCDHB11Q9Y5F2 AP001858.2-201ENST00000536213 601 ntBASIC6.13□□□□□ -1.43
PCDHB11Q9Y5F2 DYNLL1P4-201ENST00000549314 266 ntBASIC6.13□□□□□ -1.43
PCDHB11Q9Y5F2 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC6.13□□□□□ -1.43
PCDHB11Q9Y5F2 RN7SL475P-201ENST00000583379 298 ntBASIC6.13□□□□□ -1.43
PCDHB11Q9Y5F2 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC6.13□□□□□ -1.43
PCDHB11Q9Y5F2 AC008507.3-201ENST00000585753 472 ntBASIC6.13□□□□□ -1.43
PCDHB11Q9Y5F2 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC6.13□□□□□ -1.43
PCDHB11Q9Y5F2 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.13□□□□□ -1.43
PCDHB11Q9Y5F2 AC020634.1-201ENST00000608701 549 ntBASIC6.13□□□□□ -1.43
PCDHB11Q9Y5F2 U2.17-201ENST00000611454 95 ntBASIC6.13□□□□□ -1.43
PCDHB11Q9Y5F2 FAM27E2-201ENST00000619668 403 ntBASIC6.13□□□□□ -1.43
PCDHB11Q9Y5F2 MIR7159-201ENST00000620587 66 ntBASIC6.13□□□□□ -1.43
PCDHB11Q9Y5F2 AC109780.1-201ENST00000451768 1344 ntBASIC6.13□□□□□ -1.43
PCDHB11Q9Y5F2 AL122126.1-201ENST00000546905 1318 ntBASIC6.13□□□□□ -1.43
PCDHB11Q9Y5F2 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PCDHB11Q9Y5F2 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PCDHB11Q9Y5F2 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
PCDHB11Q9Y5F2 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PCDHB11Q9Y5F2 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PCDHB11Q9Y5F2 AC011369.2-201ENST00000624423 1567 ntBASIC6.13□□□□□ -1.43
PCDHB11Q9Y5F2 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
PCDHB11Q9Y5F2 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PCDHB11Q9Y5F2 NLRP3P1-201ENST00000622303 1785 ntBASIC6.13□□□□□ -1.43
PCDHB11Q9Y5F2 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
PCDHB11Q9Y5F2 AL359976.1-201ENST00000418655 3528 ntBASIC6.12□□□□□ -1.43
PCDHB11Q9Y5F2 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
PCDHB11Q9Y5F2 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PCDHB11Q9Y5F2 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
PCDHB11Q9Y5F2 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PCDHB11Q9Y5F2 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
PCDHB11Q9Y5F2 Y_RNA.473-201ENST00000384333 102 ntBASIC6.12□□□□□ -1.43
PCDHB11Q9Y5F2 Y_RNA.493-201ENST00000384422 102 ntBASIC6.12□□□□□ -1.43
PCDHB11Q9Y5F2 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.12□□□□□ -1.43
PCDHB11Q9Y5F2 RNU6-101P-201ENST00000410323 104 ntBASIC6.12□□□□□ -1.43
PCDHB11Q9Y5F2 RNA5SP251-201ENST00000410614 137 ntBASIC6.12□□□□□ -1.43
PCDHB11Q9Y5F2 UBE2V1P14-201ENST00000415815 558 ntBASIC6.12□□□□□ -1.43
PCDHB11Q9Y5F2 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC6.12□□□□□ -1.43
PCDHB11Q9Y5F2 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC6.12□□□□□ -1.43
PCDHB11Q9Y5F2 TRAPPC2P5-201ENST00000426293 308 ntBASIC6.12□□□□□ -1.43
PCDHB11Q9Y5F2 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC6.12□□□□□ -1.43
PCDHB11Q9Y5F2 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.12□□□□□ -1.43
PCDHB11Q9Y5F2 MSL3P1-202ENST00000440028 1468 ntBASIC6.12□□□□□ -1.43
PCDHB11Q9Y5F2 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
PCDHB11Q9Y5F2 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms