Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.11□□□□□ -1.91
KCNIP3Q9Y2W7 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.11□□□□□ -1.91
KCNIP3Q9Y2W7 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.11□□□□□ -1.91
KCNIP3Q9Y2W7 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.11□□□□□ -1.91
KCNIP3Q9Y2W7 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.11□□□□□ -1.91
KCNIP3Q9Y2W7 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.11□□□□□ -1.91
KCNIP3Q9Y2W7 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.11□□□□□ -1.91
KCNIP3Q9Y2W7 AL355812.1-201ENST00000603215 216 ntBASIC3.11□□□□□ -1.91
KCNIP3Q9Y2W7 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.11□□□□□ -1.91
KCNIP3Q9Y2W7 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
KCNIP3Q9Y2W7 SNORA11.6-201ENST00000619030 128 ntBASIC3.11□□□□□ -1.91
KCNIP3Q9Y2W7 AC090506.2-201ENST00000624521 419 ntBASIC3.11□□□□□ -1.91
KCNIP3Q9Y2W7 MIR3653-201ENST00000625572 110 ntBASIC3.11□□□□□ -1.91
KCNIP3Q9Y2W7 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.11□□□□□ -1.91
KCNIP3Q9Y2W7 AC006927.2-201ENST00000639256 389 ntBASIC3.11□□□□□ -1.91
KCNIP3Q9Y2W7 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
KCNIP3Q9Y2W7 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
KCNIP3Q9Y2W7 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
KCNIP3Q9Y2W7 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.1□□□□□ -1.91
KCNIP3Q9Y2W7 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
KCNIP3Q9Y2W7 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
KCNIP3Q9Y2W7 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.1□□□□□ -1.91
KCNIP3Q9Y2W7 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.1□□□□□ -1.91
KCNIP3Q9Y2W7 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
KCNIP3Q9Y2W7 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
KCNIP3Q9Y2W7 RNU6-989P-201ENST00000362756 107 ntBASIC3.1□□□□□ -1.91
KCNIP3Q9Y2W7 RNU6-251P-201ENST00000363235 104 ntBASIC3.1□□□□□ -1.91
KCNIP3Q9Y2W7 RNU5B-4P-201ENST00000363508 111 ntBASIC3.1□□□□□ -1.91
KCNIP3Q9Y2W7 RNU6-283P-201ENST00000364788 107 ntBASIC3.1□□□□□ -1.91
KCNIP3Q9Y2W7 AC234772.1-201ENST00000377927 937 ntBASIC3.1□□□□□ -1.91
KCNIP3Q9Y2W7 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3.1□□□□□ -1.91
KCNIP3Q9Y2W7 AL023807.1-201ENST00000407932 359 ntBASIC3.1□□□□□ -1.91
KCNIP3Q9Y2W7 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.1□□□□□ -1.91
KCNIP3Q9Y2W7 HMGB3P20-201ENST00000417997 600 ntBASIC3.1□□□□□ -1.91
KCNIP3Q9Y2W7 BX510359.3-201ENST00000422168 306 ntBASIC3.1□□□□□ -1.91
KCNIP3Q9Y2W7 OSTCP5-201ENST00000425293 453 ntBASIC3.1□□□□□ -1.91
KCNIP3Q9Y2W7 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.1□□□□□ -1.91
KCNIP3Q9Y2W7 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3.1□□□□□ -1.91
KCNIP3Q9Y2W7 AC005345.1-201ENST00000431868 217 ntBASIC3.1□□□□□ -1.91
KCNIP3Q9Y2W7 ARL4AP4-201ENST00000434170 518 ntBASIC3.1□□□□□ -1.91
KCNIP3Q9Y2W7 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
KCNIP3Q9Y2W7 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.1□□□□□ -1.91
KCNIP3Q9Y2W7 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC3.1□□□□□ -1.91
KCNIP3Q9Y2W7 CBX1P1-201ENST00000440184 427 ntBASIC3.1□□□□□ -1.91
KCNIP3Q9Y2W7 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC3.1□□□□□ -1.91
KCNIP3Q9Y2W7 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.1□□□□□ -1.91
KCNIP3Q9Y2W7 RPS24P6-201ENST00000452670 400 ntBASIC3.1□□□□□ -1.91
KCNIP3Q9Y2W7 AC016724.1-201ENST00000453215 421 ntBASIC3.1□□□□□ -1.91
KCNIP3Q9Y2W7 MTCO3P2-201ENST00000457365 171 ntBASIC3.1□□□□□ -1.91
KCNIP3Q9Y2W7 U3.44-201ENST00000458938 192 ntBASIC3.1□□□□□ -1.91
KCNIP3Q9Y2W7 AC087312.1-201ENST00000471411 480 ntBASIC3.1□□□□□ -1.91
KCNIP3Q9Y2W7 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC3.1□□□□□ -1.91
KCNIP3Q9Y2W7 AC041039.1-201ENST00000485656 536 ntBASIC3.1□□□□□ -1.91
KCNIP3Q9Y2W7 ACTG1P13-201ENST00000486987 1043 ntBASIC3.1□□□□□ -1.91
KCNIP3Q9Y2W7 AC092902.1-201ENST00000486999 259 ntBASIC3.1□□□□□ -1.91
KCNIP3Q9Y2W7 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
KCNIP3Q9Y2W7 HMGN1P15-201ENST00000513870 295 ntBASIC3.1□□□□□ -1.91
KCNIP3Q9Y2W7 RNA5SP380-201ENST00000517190 98 ntBASIC3.1□□□□□ -1.91
KCNIP3Q9Y2W7 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.1□□□□□ -1.91
KCNIP3Q9Y2W7 ZNF705CP-201ENST00000530515 889 ntBASIC3.1□□□□□ -1.91
KCNIP3Q9Y2W7 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.1□□□□□ -1.91
KCNIP3Q9Y2W7 YPEL5P3-201ENST00000547227 352 ntBASIC3.1□□□□□ -1.91
KCNIP3Q9Y2W7 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
KCNIP3Q9Y2W7 OR4H12P-201ENST00000556269 907 ntBASIC3.1□□□□□ -1.91
KCNIP3Q9Y2W7 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.1□□□□□ -1.91
KCNIP3Q9Y2W7 AC010735.1-201ENST00000567305 1026 ntBASIC3.1□□□□□ -1.91
KCNIP3Q9Y2W7 MIR4715-201ENST00000584117 79 ntBASIC3.1□□□□□ -1.91
KCNIP3Q9Y2W7 OR7E18P-201ENST00000592589 702 ntBASIC3.1□□□□□ -1.91
KCNIP3Q9Y2W7 VN1R87P-201ENST00000596706 487 ntBASIC3.1□□□□□ -1.91
KCNIP3Q9Y2W7 AC103881.1-201ENST00000603476 538 ntBASIC3.1□□□□□ -1.91
KCNIP3Q9Y2W7 AC011468.4-201ENST00000603942 409 ntBASIC3.1□□□□□ -1.91
KCNIP3Q9Y2W7 AP000238.1-201ENST00000608759 426 ntBASIC3.1□□□□□ -1.91
KCNIP3Q9Y2W7 CCT5-215ENST00000625723 135 ntTSL 5 BASIC3.1□□□□□ -1.91
KCNIP3Q9Y2W7 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.1□□□□□ -1.91
KCNIP3Q9Y2W7 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC3.1□□□□□ -1.91
KCNIP3Q9Y2W7 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.1□□□□□ -1.91
KCNIP3Q9Y2W7 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
KCNIP3Q9Y2W7 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.1□□□□□ -1.91
KCNIP3Q9Y2W7 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
KCNIP3Q9Y2W7 AC005261.4-201ENST00000600047 1385 ntBASIC3.1□□□□□ -1.91
KCNIP3Q9Y2W7 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
KCNIP3Q9Y2W7 MAPK10-362ENST00000641864 4484 ntBASIC3.1□□□□□ -1.91
KCNIP3Q9Y2W7 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
KCNIP3Q9Y2W7 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
KCNIP3Q9Y2W7 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
KCNIP3Q9Y2W7 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.09□□□□□ -1.91
KCNIP3Q9Y2W7 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
KCNIP3Q9Y2W7 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
KCNIP3Q9Y2W7 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
KCNIP3Q9Y2W7 CASC19-261ENST00000641853 1638 ntBASIC3.09□□□□□ -1.91
KCNIP3Q9Y2W7 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
KCNIP3Q9Y2W7 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.09□□□□□ -1.91
KCNIP3Q9Y2W7 RNU6-805P-201ENST00000365643 106 ntBASIC3.09□□□□□ -1.91
KCNIP3Q9Y2W7 SNORA40.4-201ENST00000390971 128 ntBASIC3.09□□□□□ -1.91
KCNIP3Q9Y2W7 AC092642.1-201ENST00000392417 425 ntBASIC3.09□□□□□ -1.91
KCNIP3Q9Y2W7 MTND4LP20-201ENST00000402379 270 ntBASIC3.09□□□□□ -1.91
KCNIP3Q9Y2W7 ZNF602P-201ENST00000405929 924 ntBASIC3.09□□□□□ -1.91
KCNIP3Q9Y2W7 AP000567.1-201ENST00000406413 156 ntBASIC3.09□□□□□ -1.91
KCNIP3Q9Y2W7 RNU4-78P-201ENST00000410940 126 ntBASIC3.09□□□□□ -1.91
KCNIP3Q9Y2W7 RN7SKP33-201ENST00000410942 340 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 141.2 ms