Protein–RNA interactions for Protein: Q9UN37

VPS4A, Vacuolar protein sorting-associated protein 4A, humanhuman

Predictions only

Length 437 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4AQ9UN37 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC4.48□□□□□ -1.69
VPS4AQ9UN37 AC133555.2-201ENST00000550213 292 ntBASIC4.48□□□□□ -1.69
VPS4AQ9UN37 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.48□□□□□ -1.69
VPS4AQ9UN37 PSMB7P1-201ENST00000556349 514 ntBASIC4.48□□□□□ -1.69
VPS4AQ9UN37 AGGF1P4-201ENST00000568249 801 ntBASIC4.48□□□□□ -1.69
VPS4AQ9UN37 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC4.48□□□□□ -1.69
VPS4AQ9UN37 MIR4716-201ENST00000579628 84 ntBASIC4.48□□□□□ -1.69
VPS4AQ9UN37 AL109618.2-201ENST00000605527 211 ntBASIC4.48□□□□□ -1.69
VPS4AQ9UN37 RNU6-88P-201ENST00000606801 100 ntBASIC4.48□□□□□ -1.69
VPS4AQ9UN37 MIR6716-201ENST00000613413 80 ntBASIC4.48□□□□□ -1.69
VPS4AQ9UN37 AC079228.1-201ENST00000624774 1049 ntBASIC4.48□□□□□ -1.69
VPS4AQ9UN37 AC012020.1-201ENST00000624541 1728 ntBASIC4.48□□□□□ -1.69
VPS4AQ9UN37 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
VPS4AQ9UN37 ZFRP1-201ENST00000457579 2970 ntBASIC4.48□□□□□ -1.69
VPS4AQ9UN37 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
VPS4AQ9UN37 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.48□□□□□ -1.69
VPS4AQ9UN37 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
VPS4AQ9UN37 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
VPS4AQ9UN37 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
VPS4AQ9UN37 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
VPS4AQ9UN37 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
VPS4AQ9UN37 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
VPS4AQ9UN37 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
VPS4AQ9UN37 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
VPS4AQ9UN37 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
VPS4AQ9UN37 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
VPS4AQ9UN37 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
VPS4AQ9UN37 RNA5SP447-201ENST00000363749 119 ntBASIC4.47□□□□□ -1.69
VPS4AQ9UN37 RNU4-75P-201ENST00000364621 146 ntBASIC4.47□□□□□ -1.69
VPS4AQ9UN37 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC4.47□□□□□ -1.69
VPS4AQ9UN37 RNU6-1293P-201ENST00000384077 107 ntBASIC4.47□□□□□ -1.69
VPS4AQ9UN37 MIR649-201ENST00000384843 97 ntBASIC4.47□□□□□ -1.69
VPS4AQ9UN37 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
VPS4AQ9UN37 MTCO3P41-201ENST00000414801 328 ntBASIC4.47□□□□□ -1.69
VPS4AQ9UN37 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.47□□□□□ -1.69
VPS4AQ9UN37 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.47□□□□□ -1.69
VPS4AQ9UN37 AC016831.4-201ENST00000438302 307 ntBASIC4.47□□□□□ -1.69
VPS4AQ9UN37 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.47□□□□□ -1.69
VPS4AQ9UN37 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.47□□□□□ -1.69
VPS4AQ9UN37 RPS26P56-201ENST00000444468 240 ntBASIC4.47□□□□□ -1.69
VPS4AQ9UN37 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC4.47□□□□□ -1.69
VPS4AQ9UN37 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.47□□□□□ -1.69
VPS4AQ9UN37 IFNWP4-201ENST00000453148 294 ntBASIC4.47□□□□□ -1.69
VPS4AQ9UN37 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.47□□□□□ -1.69
VPS4AQ9UN37 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
VPS4AQ9UN37 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.47□□□□□ -1.69
VPS4AQ9UN37 AC010469.1-201ENST00000463864 576 ntBASIC4.47□□□□□ -1.69
VPS4AQ9UN37 RN7SL41P-201ENST00000476144 297 ntBASIC4.47□□□□□ -1.69
VPS4AQ9UN37 RPL21P129-201ENST00000491732 478 ntBASIC4.47□□□□□ -1.69
VPS4AQ9UN37 AC091965.2-201ENST00000512324 613 ntBASIC4.47□□□□□ -1.69
VPS4AQ9UN37 AC018797.3-201ENST00000513388 1241 ntBASIC4.47□□□□□ -1.69
VPS4AQ9UN37 SNORD116-26-201ENST00000516006 96 ntBASIC4.47□□□□□ -1.69
VPS4AQ9UN37 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
VPS4AQ9UN37 AP000873.5-201ENST00000533906 236 ntBASIC4.47□□□□□ -1.69
VPS4AQ9UN37 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.47□□□□□ -1.69
VPS4AQ9UN37 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.47□□□□□ -1.69
VPS4AQ9UN37 AC006362.1-201ENST00000567392 174 ntBASIC4.47□□□□□ -1.69
VPS4AQ9UN37 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.47□□□□□ -1.69
VPS4AQ9UN37 RN7SL802P-201ENST00000577858 299 ntBASIC4.47□□□□□ -1.69
VPS4AQ9UN37 MIR3160-1-201ENST00000577972 85 ntBASIC4.47□□□□□ -1.69
VPS4AQ9UN37 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.47□□□□□ -1.69
VPS4AQ9UN37 MIR5699-201ENST00000578903 90 ntBASIC4.47□□□□□ -1.69
VPS4AQ9UN37 AC023575.1-201ENST00000580510 358 ntBASIC4.47□□□□□ -1.69
VPS4AQ9UN37 AC022726.1-201ENST00000587475 207 ntBASIC4.47□□□□□ -1.69
VPS4AQ9UN37 AC080078.2-201ENST00000603766 501 ntBASIC4.47□□□□□ -1.69
VPS4AQ9UN37 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.47□□□□□ -1.69
VPS4AQ9UN37 AC087752.4-201ENST00000605911 462 ntBASIC4.47□□□□□ -1.69
VPS4AQ9UN37 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.47□□□□□ -1.69
VPS4AQ9UN37 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.47□□□□□ -1.69
VPS4AQ9UN37 AL391497.1-201ENST00000608671 547 ntBASIC4.47□□□□□ -1.69
VPS4AQ9UN37 AC012360.2-201ENST00000609349 391 ntBASIC4.47□□□□□ -1.69
VPS4AQ9UN37 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.47□□□□□ -1.69
VPS4AQ9UN37 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.47□□□□□ -1.69
VPS4AQ9UN37 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
VPS4AQ9UN37 RNU6-156P-201ENST00000621869 107 ntBASIC4.47□□□□□ -1.69
VPS4AQ9UN37 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.47□□□□□ -1.69
VPS4AQ9UN37 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.47□□□□□ -1.69
VPS4AQ9UN37 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.47□□□□□ -1.69
VPS4AQ9UN37 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.47□□□□□ -1.69
VPS4AQ9UN37 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
VPS4AQ9UN37 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
VPS4AQ9UN37 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
VPS4AQ9UN37 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.47□□□□□ -1.69
VPS4AQ9UN37 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
VPS4AQ9UN37 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
VPS4AQ9UN37 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.47□□□□□ -1.69
VPS4AQ9UN37 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.46□□□□□ -1.69
VPS4AQ9UN37 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
VPS4AQ9UN37 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
VPS4AQ9UN37 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.46□□□□□ -1.69
VPS4AQ9UN37 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.69
VPS4AQ9UN37 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
VPS4AQ9UN37 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
VPS4AQ9UN37 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
VPS4AQ9UN37 AL031119.1-201ENST00000404707 1879 ntBASIC4.46□□□□□ -1.7
VPS4AQ9UN37 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
VPS4AQ9UN37 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
VPS4AQ9UN37 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
VPS4AQ9UN37 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
VPS4AQ9UN37 RNU1-64P-201ENST00000365443 163 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 134.4 ms