Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 HMGB1P13-201ENST00000406019 642 ntBASIC4.36□□□□□ -1.71
NPC1L1Q9UHC9 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.36□□□□□ -1.71
NPC1L1Q9UHC9 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.36□□□□□ -1.71
NPC1L1Q9UHC9 PTP4A1P3-201ENST00000433661 420 ntBASIC4.36□□□□□ -1.71
NPC1L1Q9UHC9 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC4.36□□□□□ -1.71
NPC1L1Q9UHC9 AL353718.1-201ENST00000451028 517 ntBASIC4.36□□□□□ -1.71
NPC1L1Q9UHC9 AC011037.1-201ENST00000483964 558 ntBASIC4.36□□□□□ -1.71
NPC1L1Q9UHC9 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.36□□□□□ -1.71
NPC1L1Q9UHC9 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.36□□□□□ -1.71
NPC1L1Q9UHC9 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.36□□□□□ -1.71
NPC1L1Q9UHC9 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC4.36□□□□□ -1.71
NPC1L1Q9UHC9 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC4.36□□□□□ -1.71
NPC1L1Q9UHC9 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.36□□□□□ -1.71
NPC1L1Q9UHC9 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NPC1L1Q9UHC9 AL133412.1-201ENST00000380194 2992 ntBASIC4.36□□□□□ -1.71
NPC1L1Q9UHC9 Z73965.1-201ENST00000623412 2297 ntBASIC4.35□□□□□ -1.71
NPC1L1Q9UHC9 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
NPC1L1Q9UHC9 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.35□□□□□ -1.71
NPC1L1Q9UHC9 U3.26-201ENST00000391236 204 ntBASIC4.35□□□□□ -1.71
NPC1L1Q9UHC9 RPS12P23-201ENST00000419579 400 ntBASIC4.35□□□□□ -1.71
NPC1L1Q9UHC9 AL138785.1-201ENST00000425821 331 ntBASIC4.35□□□□□ -1.71
NPC1L1Q9UHC9 MTATP6P11-201ENST00000428071 670 ntBASIC4.35□□□□□ -1.71
NPC1L1Q9UHC9 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.35□□□□□ -1.71
NPC1L1Q9UHC9 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.35□□□□□ -1.71
NPC1L1Q9UHC9 AC091862.1-201ENST00000438016 1100 ntBASIC4.35□□□□□ -1.71
NPC1L1Q9UHC9 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.35□□□□□ -1.71
NPC1L1Q9UHC9 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC4.35□□□□□ -1.71
NPC1L1Q9UHC9 RPL37P3-201ENST00000456825 293 ntBASIC4.35□□□□□ -1.71
NPC1L1Q9UHC9 HMGN1P18-201ENST00000457642 277 ntBASIC4.35□□□□□ -1.71
NPC1L1Q9UHC9 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.35□□□□□ -1.71
NPC1L1Q9UHC9 MTND2P31-201ENST00000512602 616 ntBASIC4.35□□□□□ -1.71
NPC1L1Q9UHC9 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.35□□□□□ -1.71
NPC1L1Q9UHC9 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
NPC1L1Q9UHC9 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.35□□□□□ -1.71
NPC1L1Q9UHC9 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.35□□□□□ -1.71
NPC1L1Q9UHC9 AC025918.2-201ENST00000558683 763 ntBASIC4.35□□□□□ -1.71
NPC1L1Q9UHC9 AC084757.1-201ENST00000559987 490 ntBASIC4.35□□□□□ -1.71
NPC1L1Q9UHC9 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC4.35□□□□□ -1.71
NPC1L1Q9UHC9 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.35□□□□□ -1.71
NPC1L1Q9UHC9 AL450270.1-201ENST00000606160 391 ntBASIC4.35□□□□□ -1.71
NPC1L1Q9UHC9 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC4.35□□□□□ -1.71
NPC1L1Q9UHC9 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
NPC1L1Q9UHC9 AC024341.1-201ENST00000526444 1552 ntBASIC4.35□□□□□ -1.71
NPC1L1Q9UHC9 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
NPC1L1Q9UHC9 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
NPC1L1Q9UHC9 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
NPC1L1Q9UHC9 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
NPC1L1Q9UHC9 RNU6-1279P-201ENST00000383917 103 ntBASIC4.34□□□□□ -1.71
NPC1L1Q9UHC9 Y_RNA.500-201ENST00000384466 111 ntBASIC4.34□□□□□ -1.71
NPC1L1Q9UHC9 AL353692.2-201ENST00000407054 335 ntBASIC4.34□□□□□ -1.71
NPC1L1Q9UHC9 AC013404.1-201ENST00000413068 249 ntBASIC4.34□□□□□ -1.71
NPC1L1Q9UHC9 RPS7P13-201ENST00000413955 498 ntBASIC4.34□□□□□ -1.71
NPC1L1Q9UHC9 BX890604.2-201ENST00000427883 474 ntBASIC4.34□□□□□ -1.71
NPC1L1Q9UHC9 FO393419.3-201ENST00000428741 282 ntBASIC4.34□□□□□ -1.71
NPC1L1Q9UHC9 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.34□□□□□ -1.71
NPC1L1Q9UHC9 RPS12P18-201ENST00000442381 270 ntBASIC4.34□□□□□ -1.71
NPC1L1Q9UHC9 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.34□□□□□ -1.71
NPC1L1Q9UHC9 AC069540.1-201ENST00000446320 988 ntBASIC4.34□□□□□ -1.71
NPC1L1Q9UHC9 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.34□□□□□ -1.71
NPC1L1Q9UHC9 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
NPC1L1Q9UHC9 HMGB3P21-201ENST00000452483 547 ntBASIC4.34□□□□□ -1.71
NPC1L1Q9UHC9 MTND2P6-201ENST00000455337 1030 ntBASIC4.34□□□□□ -1.71
NPC1L1Q9UHC9 MTND2P30-201ENST00000456663 382 ntBASIC4.34□□□□□ -1.71
NPC1L1Q9UHC9 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.34□□□□□ -1.71
NPC1L1Q9UHC9 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC4.34□□□□□ -1.71
NPC1L1Q9UHC9 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC4.34□□□□□ -1.71
NPC1L1Q9UHC9 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.34□□□□□ -1.71
NPC1L1Q9UHC9 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.34□□□□□ -1.71
NPC1L1Q9UHC9 MIR4325-201ENST00000583049 90 ntBASIC4.34□□□□□ -1.71
NPC1L1Q9UHC9 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC4.34□□□□□ -1.71
NPC1L1Q9UHC9 AC125494.3-201ENST00000602759 455 ntBASIC4.34□□□□□ -1.71
NPC1L1Q9UHC9 AL671309.1-201ENST00000603750 544 ntBASIC4.34□□□□□ -1.71
NPC1L1Q9UHC9 AC079610.2-201ENST00000604818 690 ntBASIC4.34□□□□□ -1.71
NPC1L1Q9UHC9 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC4.34□□□□□ -1.71
NPC1L1Q9UHC9 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC4.34□□□□□ -1.71
NPC1L1Q9UHC9 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC4.34□□□□□ -1.71
NPC1L1Q9UHC9 AL592437.2-201ENST00000421655 2434 ntBASIC4.34□□□□□ -1.71
NPC1L1Q9UHC9 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
NPC1L1Q9UHC9 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
NPC1L1Q9UHC9 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
NPC1L1Q9UHC9 IARS-201ENST00000375627 697 ntTSL 3 BASIC4.33□□□□□ -1.72
NPC1L1Q9UHC9 SNORA54-201ENST00000384281 123 ntBASIC4.33□□□□□ -1.72
NPC1L1Q9UHC9 RPL31P52-201ENST00000407532 367 ntBASIC4.33□□□□□ -1.72
NPC1L1Q9UHC9 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.33□□□□□ -1.72
NPC1L1Q9UHC9 AL031663.1-201ENST00000437445 219 ntBASIC4.33□□□□□ -1.72
NPC1L1Q9UHC9 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC4.33□□□□□ -1.72
NPC1L1Q9UHC9 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.33□□□□□ -1.72
NPC1L1Q9UHC9 NFU1-207ENST00000462320 558 ntTSL 4 BASIC4.33□□□□□ -1.72
NPC1L1Q9UHC9 RN7SL863P-201ENST00000462370 296 ntBASIC4.33□□□□□ -1.72
NPC1L1Q9UHC9 AC010683.1-201ENST00000473673 378 ntBASIC4.33□□□□□ -1.72
NPC1L1Q9UHC9 UBE2DNL-203ENST00000474922 222 ntBASIC4.33□□□□□ -1.72
NPC1L1Q9UHC9 PTGES3P3-201ENST00000511479 482 ntBASIC4.33□□□□□ -1.72
NPC1L1Q9UHC9 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC4.33□□□□□ -1.72
NPC1L1Q9UHC9 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.33□□□□□ -1.72
NPC1L1Q9UHC9 HAUS1P3-201ENST00000523909 662 ntBASIC4.33□□□□□ -1.72
NPC1L1Q9UHC9 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC4.33□□□□□ -1.72
NPC1L1Q9UHC9 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC4.33□□□□□ -1.72
NPC1L1Q9UHC9 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4.33□□□□□ -1.72
NPC1L1Q9UHC9 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC4.33□□□□□ -1.72
NPC1L1Q9UHC9 AP001033.2-201ENST00000609701 1003 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms