Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 RPL6P5-201ENST00000445678 828 ntBASIC3.16□□□□□ -1.9
DUX4Q9UBX2 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.16□□□□□ -1.9
DUX4Q9UBX2 UBDP1-202ENST00000457888 382 ntBASIC3.16□□□□□ -1.9
DUX4Q9UBX2 AC091959.2-201ENST00000477363 321 ntBASIC3.16□□□□□ -1.9
DUX4Q9UBX2 AC020893.1-201ENST00000502452 580 ntBASIC3.16□□□□□ -1.9
DUX4Q9UBX2 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.16□□□□□ -1.9
DUX4Q9UBX2 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.16□□□□□ -1.9
DUX4Q9UBX2 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC3.16□□□□□ -1.9
DUX4Q9UBX2 AC114967.1-201ENST00000504890 259 ntBASIC3.16□□□□□ -1.9
DUX4Q9UBX2 RNU2-58P-201ENST00000516403 183 ntBASIC3.16□□□□□ -1.9
DUX4Q9UBX2 AC068657.1-201ENST00000520807 306 ntBASIC3.16□□□□□ -1.9
DUX4Q9UBX2 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.16□□□□□ -1.9
DUX4Q9UBX2 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.16□□□□□ -1.9
DUX4Q9UBX2 OR4R3P-201ENST00000525084 838 ntBASIC3.16□□□□□ -1.9
DUX4Q9UBX2 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.16□□□□□ -1.9
DUX4Q9UBX2 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC3.16□□□□□ -1.9
DUX4Q9UBX2 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC3.16□□□□□ -1.9
DUX4Q9UBX2 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.16□□□□□ -1.9
DUX4Q9UBX2 AC053481.3-201ENST00000577881 843 ntBASIC3.16□□□□□ -1.9
DUX4Q9UBX2 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.16□□□□□ -1.9
DUX4Q9UBX2 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
DUX4Q9UBX2 AC096586.1-201ENST00000610267 561 ntBASIC3.16□□□□□ -1.9
DUX4Q9UBX2 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
DUX4Q9UBX2 AC112200.1-201ENST00000625015 234 ntBASIC3.16□□□□□ -1.9
DUX4Q9UBX2 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.16□□□□□ -1.9
DUX4Q9UBX2 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
DUX4Q9UBX2 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
DUX4Q9UBX2 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
DUX4Q9UBX2 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
DUX4Q9UBX2 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
DUX4Q9UBX2 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC3.16□□□□□ -1.9
DUX4Q9UBX2 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
DUX4Q9UBX2 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.9
DUX4Q9UBX2 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
DUX4Q9UBX2 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
DUX4Q9UBX2 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
DUX4Q9UBX2 AC016716.1-201ENST00000265882 708 ntBASIC3.15□□□□□ -1.91
DUX4Q9UBX2 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
DUX4Q9UBX2 RNA5SP387-201ENST00000364226 106 ntBASIC3.15□□□□□ -1.91
DUX4Q9UBX2 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
DUX4Q9UBX2 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC3.15□□□□□ -1.91
DUX4Q9UBX2 SNORD3H-201ENST00000384486 214 ntBASIC3.15□□□□□ -1.91
DUX4Q9UBX2 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
DUX4Q9UBX2 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
DUX4Q9UBX2 PTMAP2-201ENST00000397627 327 ntBASIC3.15□□□□□ -1.91
DUX4Q9UBX2 SFR1P1-201ENST00000403720 688 ntBASIC3.15□□□□□ -1.91
DUX4Q9UBX2 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.15□□□□□ -1.91
DUX4Q9UBX2 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.15□□□□□ -1.91
DUX4Q9UBX2 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.15□□□□□ -1.91
DUX4Q9UBX2 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.15□□□□□ -1.91
DUX4Q9UBX2 AC073508.1-201ENST00000428866 656 ntBASIC3.15□□□□□ -1.91
DUX4Q9UBX2 RPL23AP22-201ENST00000437556 453 ntBASIC3.15□□□□□ -1.91
DUX4Q9UBX2 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC3.15□□□□□ -1.91
DUX4Q9UBX2 AL358232.1-201ENST00000448030 501 ntBASIC3.15□□□□□ -1.91
DUX4Q9UBX2 AL034418.1-201ENST00000448675 860 ntBASIC3.15□□□□□ -1.91
DUX4Q9UBX2 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.15□□□□□ -1.91
DUX4Q9UBX2 snoU13.22-201ENST00000459428 104 ntBASIC3.15□□□□□ -1.91
DUX4Q9UBX2 AC087879.1-201ENST00000474343 374 ntBASIC3.15□□□□□ -1.91
DUX4Q9UBX2 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.15□□□□□ -1.91
DUX4Q9UBX2 RPS27P23-201ENST00000487608 251 ntBASIC3.15□□□□□ -1.91
DUX4Q9UBX2 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.15□□□□□ -1.91
DUX4Q9UBX2 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.15□□□□□ -1.91
DUX4Q9UBX2 AC110768.1-201ENST00000509222 400 ntBASIC3.15□□□□□ -1.91
DUX4Q9UBX2 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
DUX4Q9UBX2 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.15□□□□□ -1.91
DUX4Q9UBX2 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.15□□□□□ -1.91
DUX4Q9UBX2 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC3.15□□□□□ -1.91
DUX4Q9UBX2 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.15□□□□□ -1.91
DUX4Q9UBX2 CYCSP30-201ENST00000546447 172 ntBASIC3.15□□□□□ -1.91
DUX4Q9UBX2 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.15□□□□□ -1.91
DUX4Q9UBX2 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.15□□□□□ -1.91
DUX4Q9UBX2 EIF5A2P1-201ENST00000564027 460 ntBASIC3.15□□□□□ -1.91
DUX4Q9UBX2 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.15□□□□□ -1.91
DUX4Q9UBX2 AC095057.3-201ENST00000567102 1157 ntBASIC3.15□□□□□ -1.91
DUX4Q9UBX2 AC012254.4-201ENST00000588843 273 ntBASIC3.15□□□□□ -1.91
DUX4Q9UBX2 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.15□□□□□ -1.91
DUX4Q9UBX2 YWHAQP7-201ENST00000603536 658 ntBASIC3.15□□□□□ -1.91
DUX4Q9UBX2 SNORA62.6-201ENST00000606322 83 ntBASIC3.15□□□□□ -1.91
DUX4Q9UBX2 AC090912.3-201ENST00000609775 533 ntBASIC3.15□□□□□ -1.91
DUX4Q9UBX2 AC005344.1-201ENST00000613391 459 ntBASIC3.15□□□□□ -1.91
DUX4Q9UBX2 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.15□□□□□ -1.91
DUX4Q9UBX2 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
DUX4Q9UBX2 AC006213.5-201ENST00000619673 288 ntBASIC3.15□□□□□ -1.91
DUX4Q9UBX2 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
DUX4Q9UBX2 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
DUX4Q9UBX2 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.15□□□□□ -1.91
DUX4Q9UBX2 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.15□□□□□ -1.91
DUX4Q9UBX2 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
DUX4Q9UBX2 AL359893.1-201ENST00000447628 1580 ntBASIC3.15□□□□□ -1.91
DUX4Q9UBX2 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
DUX4Q9UBX2 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
DUX4Q9UBX2 AC007496.3-201ENST00000624987 3443 ntBASIC3.15□□□□□ -1.91
DUX4Q9UBX2 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
DUX4Q9UBX2 SRP72P2-201ENST00000344851 1979 ntBASIC3.14□□□□□ -1.91
DUX4Q9UBX2 ZNF37BP-203ENST00000452306 1352 ntBASIC3.14□□□□□ -1.91
DUX4Q9UBX2 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.14□□□□□ -1.91
DUX4Q9UBX2 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
DUX4Q9UBX2 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.14□□□□□ -1.91
DUX4Q9UBX2 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.14□□□□□ -1.91
DUX4Q9UBX2 AC021755.1-201ENST00000559747 1447 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms