Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 AC011592.1-201ENST00000624647 3634 ntBASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 MELK-207ENST00000536860 2342 ntTSL 2 BASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 SGMS1-AS1-201ENST00000443374 12400 ntTSL 4 BASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 WBP11P1-201ENST00000562560 1931 ntBASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 AC104581.5-201ENST00000624171 7141 ntBASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 ANAPC1P1-201ENST00000426186 2145 ntBASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 SRP72P2-201ENST00000344851 1979 ntBASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 AC011525.1-201ENST00000562167 5676 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 AP001157.1-201ENST00000550837 2339 ntBASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 OR5M2P-202ENST00000641241 4242 ntBASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 AC083806.2-201ENST00000617795 2685 ntBASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 PCDH15-226ENST00000613657 6329 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 AC020633.1-201ENST00000468439 2247 ntBASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 SNORD16-201ENST00000362803 99 ntBASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 RNU1-49P-201ENST00000363468 159 ntBASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 RNA5SP510-201ENST00000364697 99 ntBASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 RNU6-108P-201ENST00000365558 107 ntBASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 RNU6-549P-201ENST00000384433 107 ntBASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 SNORA41-201ENST00000384675 132 ntBASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 SNORD65C-201ENST00000390962 71 ntBASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 SNORD115-46-201ENST00000390982 71 ntBASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 SNORD115.1-201ENST00000391109 76 ntBASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 MIR513C-201ENST00000401352 84 ntBASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 AL023284.3-201ENST00000407767 334 ntBASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 RNU6-1025P-201ENST00000410629 104 ntBASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 AC096664.2-201ENST00000411843 406 ntBASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 RPS6P23-201ENST00000413224 722 ntBASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 EEF1A1P29-201ENST00000416082 1096 ntBASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 AL713922.1-201ENST00000416477 747 ntBASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 AL158823.1-201ENST00000418441 478 ntBASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 CYP4F30P-202ENST00000420048 405 ntBASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 AC007559.1-201ENST00000428736 355 ntBASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 SKP1P3-201ENST00000429280 487 ntBASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 PCBP2P1-201ENST00000437262 977 ntBASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 EMC3-AS1-205ENST00000438698 534 ntBASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 AC015983.1-201ENST00000441577 373 ntBASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 HMGN2P32-201ENST00000444648 269 ntBASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 AL136380.1-201ENST00000447970 162 ntBASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 GAS5-218ENST00000448718 565 ntTSL 2 BASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 PPIAP20-201ENST00000449839 135 ntBASIC2.12□□□□□ -2.07
KRTAP4-3Q9BYR4 OR52I1-201ENST00000450052 1050 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms