Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 RNA5SP52-201ENST00000362448 134 ntBASIC4.54□□□□□ -1.68
VPS50Q96JG6 Y_RNA.359-201ENST00000365498 102 ntBASIC4.54□□□□□ -1.68
VPS50Q96JG6 CYB5AP4-201ENST00000396692 399 ntBASIC4.54□□□□□ -1.68
VPS50Q96JG6 DEFB108C-201ENST00000400154 252 ntBASIC4.54□□□□□ -1.68
VPS50Q96JG6 FABP12P1-201ENST00000401911 322 ntBASIC4.54□□□□□ -1.68
VPS50Q96JG6 Z98745.1-201ENST00000402553 494 ntBASIC4.54□□□□□ -1.68
VPS50Q96JG6 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
VPS50Q96JG6 RN7SKP267-201ENST00000410381 285 ntBASIC4.54□□□□□ -1.68
VPS50Q96JG6 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC4.54□□□□□ -1.68
VPS50Q96JG6 DNAJC19P7-201ENST00000428811 344 ntBASIC4.54□□□□□ -1.68
VPS50Q96JG6 ZYG11AP1-201ENST00000430329 837 ntBASIC4.54□□□□□ -1.68
VPS50Q96JG6 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.54□□□□□ -1.68
VPS50Q96JG6 USP9YP29-201ENST00000445112 563 ntBASIC4.54□□□□□ -1.68
VPS50Q96JG6 COX6CP12-201ENST00000446748 202 ntBASIC4.54□□□□□ -1.68
VPS50Q96JG6 VN1R10P-201ENST00000447106 875 ntBASIC4.54□□□□□ -1.68
VPS50Q96JG6 MTCO1P48-201ENST00000448024 1096 ntBASIC4.54□□□□□ -1.68
VPS50Q96JG6 HMGN3P1-201ENST00000453847 193 ntBASIC4.54□□□□□ -1.68
VPS50Q96JG6 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.54□□□□□ -1.68
VPS50Q96JG6 AC116337.2-201ENST00000477662 156 ntBASIC4.54□□□□□ -1.68
VPS50Q96JG6 RN7SL481P-201ENST00000477764 299 ntBASIC4.54□□□□□ -1.68
VPS50Q96JG6 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.54□□□□□ -1.68
VPS50Q96JG6 AC090071.1-201ENST00000507713 644 ntBASIC4.54□□□□□ -1.68
VPS50Q96JG6 MRPS33P2-201ENST00000507850 322 ntBASIC4.54□□□□□ -1.68
VPS50Q96JG6 CBX3P3-201ENST00000508108 532 ntBASIC4.54□□□□□ -1.68
VPS50Q96JG6 AC079140.3-201ENST00000511111 550 ntBASIC4.54□□□□□ -1.68
VPS50Q96JG6 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
VPS50Q96JG6 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC4.54□□□□□ -1.68
VPS50Q96JG6 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.54□□□□□ -1.68
VPS50Q96JG6 AP006289.1-201ENST00000538089 277 ntBASIC4.54□□□□□ -1.68
VPS50Q96JG6 AP001880.2-201ENST00000538233 448 ntBASIC4.54□□□□□ -1.68
VPS50Q96JG6 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.54□□□□□ -1.68
VPS50Q96JG6 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.54□□□□□ -1.68
VPS50Q96JG6 AC133555.2-201ENST00000550213 292 ntBASIC4.54□□□□□ -1.68
VPS50Q96JG6 AL161713.1-201ENST00000555538 145 ntBASIC4.54□□□□□ -1.68
VPS50Q96JG6 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.54□□□□□ -1.68
VPS50Q96JG6 AGGF1P8-201ENST00000562979 1000 ntBASIC4.54□□□□□ -1.68
VPS50Q96JG6 LARP7P2-201ENST00000575306 125 ntBASIC4.54□□□□□ -1.68
VPS50Q96JG6 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.54□□□□□ -1.68
VPS50Q96JG6 AC068790.5-201ENST00000602741 355 ntBASIC4.54□□□□□ -1.68
VPS50Q96JG6 AC078795.2-201ENST00000602835 1252 ntBASIC4.54□□□□□ -1.68
VPS50Q96JG6 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.54□□□□□ -1.68
VPS50Q96JG6 AC007497.1-201ENST00000610421 561 ntBASIC4.54□□□□□ -1.68
VPS50Q96JG6 AC243773.3-201ENST00000613270 256 ntBASIC4.54□□□□□ -1.68
VPS50Q96JG6 AC010678.1-201ENST00000614118 713 ntBASIC4.54□□□□□ -1.68
VPS50Q96JG6 AC099842.1-201ENST00000619919 596 ntBASIC4.54□□□□□ -1.68
VPS50Q96JG6 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.54□□□□□ -1.68
VPS50Q96JG6 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.54□□□□□ -1.68
VPS50Q96JG6 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC4.54□□□□□ -1.68
VPS50Q96JG6 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.54□□□□□ -1.68
VPS50Q96JG6 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.54□□□□□ -1.68
VPS50Q96JG6 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
VPS50Q96JG6 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
VPS50Q96JG6 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.54□□□□□ -1.68
VPS50Q96JG6 AC008758.3-201ENST00000507003 1829 ntBASIC4.53□□□□□ -1.68
VPS50Q96JG6 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
VPS50Q96JG6 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.53□□□□□ -1.68
VPS50Q96JG6 XPOTP1-201ENST00000443317 2398 ntBASIC4.53□□□□□ -1.68
VPS50Q96JG6 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
VPS50Q96JG6 RNVU1-6-201ENST00000364688 164 ntBASIC4.53□□□□□ -1.68
VPS50Q96JG6 RHOT1P2-201ENST00000366423 333 ntBASIC4.53□□□□□ -1.68
VPS50Q96JG6 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC4.53□□□□□ -1.68
VPS50Q96JG6 RNU6-723P-201ENST00000383973 107 ntBASIC4.53□□□□□ -1.68
VPS50Q96JG6 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.53□□□□□ -1.68
VPS50Q96JG6 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.53□□□□□ -1.68
VPS50Q96JG6 AC073264.1-201ENST00000411508 416 ntBASIC4.53□□□□□ -1.68
VPS50Q96JG6 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.53□□□□□ -1.68
VPS50Q96JG6 TBCAP2-201ENST00000416175 326 ntBASIC4.53□□□□□ -1.68
VPS50Q96JG6 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.53□□□□□ -1.68
VPS50Q96JG6 LINC00993-201ENST00000420453 540 ntBASIC4.53□□□□□ -1.68
VPS50Q96JG6 AL451139.1-201ENST00000434718 346 ntBASIC4.53□□□□□ -1.68
VPS50Q96JG6 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.53□□□□□ -1.68
VPS50Q96JG6 MTND4P6-201ENST00000438297 472 ntBASIC4.53□□□□□ -1.68
VPS50Q96JG6 RPS24P1-201ENST00000438550 371 ntBASIC4.53□□□□□ -1.68
VPS50Q96JG6 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.53□□□□□ -1.68
VPS50Q96JG6 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.53□□□□□ -1.68
VPS50Q96JG6 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.53□□□□□ -1.68
VPS50Q96JG6 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.53□□□□□ -1.68
VPS50Q96JG6 RPL39P6-201ENST00000448289 150 ntBASIC4.53□□□□□ -1.68
VPS50Q96JG6 MTND1P27-201ENST00000451117 902 ntBASIC4.53□□□□□ -1.68
VPS50Q96JG6 USP9YP10-201ENST00000454868 628 ntBASIC4.53□□□□□ -1.68
VPS50Q96JG6 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
VPS50Q96JG6 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.53□□□□□ -1.68
VPS50Q96JG6 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.53□□□□□ -1.68
VPS50Q96JG6 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.53□□□□□ -1.68
VPS50Q96JG6 USP9YP5-201ENST00000511770 630 ntBASIC4.53□□□□□ -1.68
VPS50Q96JG6 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
VPS50Q96JG6 AC018797.3-201ENST00000513388 1241 ntBASIC4.53□□□□□ -1.68
VPS50Q96JG6 AC006499.2-201ENST00000513470 337 ntBASIC4.53□□□□□ -1.68
VPS50Q96JG6 AP000873.5-201ENST00000533906 236 ntBASIC4.53□□□□□ -1.68
VPS50Q96JG6 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.53□□□□□ -1.68
VPS50Q96JG6 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.53□□□□□ -1.68
VPS50Q96JG6 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC4.53□□□□□ -1.68
VPS50Q96JG6 AC136618.2-201ENST00000575091 400 ntBASIC4.53□□□□□ -1.68
VPS50Q96JG6 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.53□□□□□ -1.68
VPS50Q96JG6 AC008759.1-201ENST00000589783 983 ntBASIC4.53□□□□□ -1.68
VPS50Q96JG6 AC020634.1-201ENST00000608701 549 ntBASIC4.53□□□□□ -1.68
VPS50Q96JG6 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.53□□□□□ -1.68
VPS50Q96JG6 AC025594.3-201ENST00000613068 790 ntBASIC4.53□□□□□ -1.68
VPS50Q96JG6 AL136964.1-201ENST00000622038 2990 ntBASIC4.53□□□□□ -1.68
VPS50Q96JG6 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms