Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AC024405.2-202ENST00000532731 184 ntBASIC6.86□□□□□ -1.31
LRCH3Q96II8 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC6.86□□□□□ -1.31
LRCH3Q96II8 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC6.86□□□□□ -1.31
LRCH3Q96II8 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC6.86□□□□□ -1.31
LRCH3Q96II8 AL451044.1-201ENST00000604867 238 ntBASIC6.86□□□□□ -1.31
LRCH3Q96II8 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC6.86□□□□□ -1.31
LRCH3Q96II8 MIR6793-201ENST00000612376 63 ntBASIC6.86□□□□□ -1.31
LRCH3Q96II8 U2.14-201ENST00000615943 113 ntBASIC6.86□□□□□ -1.31
LRCH3Q96II8 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.86□□□□□ -1.31
LRCH3Q96II8 EIF2AP4-201ENST00000424793 1781 ntBASIC6.86□□□□□ -1.31
LRCH3Q96II8 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC6.86□□□□□ -1.31
LRCH3Q96II8 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
LRCH3Q96II8 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC6.86□□□□□ -1.31
LRCH3Q96II8 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
LRCH3Q96II8 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.86□□□□□ -1.31
LRCH3Q96II8 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
LRCH3Q96II8 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC6.86□□□□□ -1.31
LRCH3Q96II8 AC023245.2-201ENST00000530760 2978 ntBASIC6.86□□□□□ -1.31
LRCH3Q96II8 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
LRCH3Q96II8 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
LRCH3Q96II8 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
LRCH3Q96II8 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
LRCH3Q96II8 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC6.85□□□□□ -1.31
LRCH3Q96II8 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
LRCH3Q96II8 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
LRCH3Q96II8 AL596244.1-201ENST00000567068 3779 ntBASIC6.85□□□□□ -1.31
LRCH3Q96II8 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
LRCH3Q96II8 TMEM75-201ENST00000624314 2165 ntBASIC6.85□□□□□ -1.31
LRCH3Q96II8 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
LRCH3Q96II8 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC6.85□□□□□ -1.31
LRCH3Q96II8 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
LRCH3Q96II8 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
LRCH3Q96II8 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
LRCH3Q96II8 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC6.85□□□□□ -1.31
LRCH3Q96II8 Y_RNA.199-201ENST00000364014 102 ntBASIC6.85□□□□□ -1.31
LRCH3Q96II8 RNU5E-6P-201ENST00000365574 115 ntBASIC6.85□□□□□ -1.31
LRCH3Q96II8 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
LRCH3Q96II8 RNU6-22P-201ENST00000384355 107 ntBASIC6.85□□□□□ -1.31
LRCH3Q96II8 RN7SKP62-201ENST00000384539 329 ntBASIC6.85□□□□□ -1.31
LRCH3Q96II8 MIR23A-201ENST00000385245 73 ntBASIC6.85□□□□□ -1.31
LRCH3Q96II8 RNU6-130P-201ENST00000411112 103 ntBASIC6.85□□□□□ -1.31
LRCH3Q96II8 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.85□□□□□ -1.31
LRCH3Q96II8 BX276092.3-201ENST00000424182 230 ntBASIC6.85□□□□□ -1.31
LRCH3Q96II8 RPL23AP25-201ENST00000430973 463 ntBASIC6.85□□□□□ -1.31
LRCH3Q96II8 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC6.85□□□□□ -1.31
LRCH3Q96II8 EEF1B2P6-201ENST00000445713 673 ntBASIC6.85□□□□□ -1.31
LRCH3Q96II8 AC009220.1-201ENST00000451614 275 ntBASIC6.85□□□□□ -1.31
LRCH3Q96II8 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC6.85□□□□□ -1.31
LRCH3Q96II8 AC004453.1-201ENST00000487895 408 ntBASIC6.85□□□□□ -1.31
LRCH3Q96II8 AC110792.1-201ENST00000491826 472 ntBASIC6.85□□□□□ -1.31
LRCH3Q96II8 AC095057.1-201ENST00000507583 168 ntBASIC6.85□□□□□ -1.31
LRCH3Q96II8 RNU7-4P-201ENST00000516961 62 ntBASIC6.85□□□□□ -1.31
LRCH3Q96II8 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC6.85□□□□□ -1.31
LRCH3Q96II8 FAM60DP-201ENST00000524174 632 ntBASIC6.85□□□□□ -1.31
LRCH3Q96II8 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.85□□□□□ -1.31
LRCH3Q96II8 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC6.85□□□□□ -1.31
LRCH3Q96II8 AC004024.1-201ENST00000549244 247 ntBASIC6.85□□□□□ -1.31
LRCH3Q96II8 AC091078.2-201ENST00000557145 559 ntBASIC6.85□□□□□ -1.31
LRCH3Q96II8 AC004232.1-201ENST00000571388 208 ntBASIC6.85□□□□□ -1.31
LRCH3Q96II8 COX6CP7-201ENST00000597056 208 ntBASIC6.85□□□□□ -1.31
LRCH3Q96II8 AC023813.4-201ENST00000607580 580 ntBASIC6.85□□□□□ -1.31
LRCH3Q96II8 AC009570.1-201ENST00000609599 745 ntBASIC6.85□□□□□ -1.31
LRCH3Q96II8 AC005344.1-201ENST00000613391 459 ntBASIC6.85□□□□□ -1.31
LRCH3Q96II8 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC6.85□□□□□ -1.31
LRCH3Q96II8 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC6.85□□□□□ -1.31
LRCH3Q96II8 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
LRCH3Q96II8 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
LRCH3Q96II8 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC6.85□□□□□ -1.31
LRCH3Q96II8 AL359976.1-201ENST00000418655 3528 ntBASIC6.85□□□□□ -1.31
LRCH3Q96II8 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC6.85□□□□□ -1.31
LRCH3Q96II8 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
LRCH3Q96II8 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
LRCH3Q96II8 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
LRCH3Q96II8 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
LRCH3Q96II8 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
LRCH3Q96II8 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
LRCH3Q96II8 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
LRCH3Q96II8 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
LRCH3Q96II8 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC6.84□□□□□ -1.31
LRCH3Q96II8 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
LRCH3Q96II8 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6.84□□□□□ -1.31
LRCH3Q96II8 CTNNA1P1-201ENST00000515849 2728 ntBASIC6.84□□□□□ -1.31
LRCH3Q96II8 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC6.84□□□□□ -1.31
LRCH3Q96II8 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
LRCH3Q96II8 SNORA21-201ENST00000362423 132 ntBASIC6.84□□□□□ -1.31
LRCH3Q96II8 RNU6-1078P-201ENST00000364522 103 ntBASIC6.84□□□□□ -1.31
LRCH3Q96II8 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC6.84□□□□□ -1.31
LRCH3Q96II8 RNU6-441P-201ENST00000384545 106 ntBASIC6.84□□□□□ -1.31
LRCH3Q96II8 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
LRCH3Q96II8 RNU6-387P-201ENST00000411331 105 ntBASIC6.84□□□□□ -1.31
LRCH3Q96II8 CBX1P3-201ENST00000413296 527 ntBASIC6.84□□□□□ -1.31
LRCH3Q96II8 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC6.84□□□□□ -1.31
LRCH3Q96II8 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC6.84□□□□□ -1.31
LRCH3Q96II8 RPS6P12-201ENST00000432491 726 ntBASIC6.84□□□□□ -1.31
LRCH3Q96II8 RPL23AP22-201ENST00000437556 453 ntBASIC6.84□□□□□ -1.31
LRCH3Q96II8 AL772161.1-201ENST00000439130 476 ntBASIC6.84□□□□□ -1.31
LRCH3Q96II8 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC6.84□□□□□ -1.31
LRCH3Q96II8 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC6.84□□□□□ -1.31
LRCH3Q96II8 AL034399.1-201ENST00000451535 380 ntBASIC6.84□□□□□ -1.31
LRCH3Q96II8 AC002553.3-201ENST00000453002 341 ntBASIC6.84□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms