Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
PGBD4Q96DM1 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PGBD4Q96DM1 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PGBD4Q96DM1 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PGBD4Q96DM1 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.14□□□□□ -1.59
PGBD4Q96DM1 AC000123.3-201ENST00000624029 4975 ntBASIC5.14□□□□□ -1.59
PGBD4Q96DM1 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PGBD4Q96DM1 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PGBD4Q96DM1 RNU6-984P-201ENST00000363236 109 ntBASIC5.14□□□□□ -1.59
PGBD4Q96DM1 RNU6-660P-201ENST00000364566 109 ntBASIC5.14□□□□□ -1.59
PGBD4Q96DM1 SNORA71.2-201ENST00000364941 134 ntBASIC5.14□□□□□ -1.59
PGBD4Q96DM1 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
PGBD4Q96DM1 AC092634.6-201ENST00000418558 192 ntBASIC5.14□□□□□ -1.59
PGBD4Q96DM1 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC5.14□□□□□ -1.59
PGBD4Q96DM1 USP9YP18-201ENST00000425912 695 ntBASIC5.14□□□□□ -1.59
PGBD4Q96DM1 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC5.14□□□□□ -1.59
PGBD4Q96DM1 RPL31P54-201ENST00000429803 370 ntBASIC5.14□□□□□ -1.59
PGBD4Q96DM1 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
PGBD4Q96DM1 TRAPPC2P9-201ENST00000434556 343 ntBASIC5.14□□□□□ -1.59
PGBD4Q96DM1 RPL35AP21-201ENST00000437667 333 ntBASIC5.14□□□□□ -1.59
PGBD4Q96DM1 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC5.14□□□□□ -1.59
PGBD4Q96DM1 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC5.14□□□□□ -1.59
PGBD4Q96DM1 EEF1E1P1-201ENST00000446998 430 ntBASIC5.14□□□□□ -1.59
PGBD4Q96DM1 WASF1P1-201ENST00000447560 1131 ntBASIC5.14□□□□□ -1.59
PGBD4Q96DM1 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.14□□□□□ -1.59
PGBD4Q96DM1 TPT1P12-201ENST00000448968 492 ntBASIC5.14□□□□□ -1.59
PGBD4Q96DM1 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC5.14□□□□□ -1.59
PGBD4Q96DM1 snoU13.7-201ENST00000459220 104 ntBASIC5.14□□□□□ -1.59
PGBD4Q96DM1 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC5.14□□□□□ -1.59
PGBD4Q96DM1 SNORA48.10-201ENST00000516965 160 ntBASIC5.14□□□□□ -1.59
PGBD4Q96DM1 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.14□□□□□ -1.59
PGBD4Q96DM1 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.14□□□□□ -1.59
PGBD4Q96DM1 AC009643.1-201ENST00000532030 391 ntBASIC5.14□□□□□ -1.59
PGBD4Q96DM1 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC5.14□□□□□ -1.59
PGBD4Q96DM1 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.14□□□□□ -1.59
PGBD4Q96DM1 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC5.14□□□□□ -1.59
PGBD4Q96DM1 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC5.14□□□□□ -1.59
PGBD4Q96DM1 GTF2IP22-201ENST00000554443 182 ntBASIC5.14□□□□□ -1.59
PGBD4Q96DM1 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC5.14□□□□□ -1.59
PGBD4Q96DM1 MIR4528-201ENST00000577763 90 ntBASIC5.14□□□□□ -1.59
PGBD4Q96DM1 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC5.14□□□□□ -1.59
PGBD4Q96DM1 MIR4697-201ENST00000582977 78 ntBASIC5.14□□□□□ -1.59
PGBD4Q96DM1 MIR4715-201ENST00000584117 79 ntBASIC5.14□□□□□ -1.59
PGBD4Q96DM1 HSPE1P14-201ENST00000605812 302 ntBASIC5.14□□□□□ -1.59
PGBD4Q96DM1 AC080013.4-201ENST00000607624 649 ntBASIC5.14□□□□□ -1.59
PGBD4Q96DM1 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC5.14□□□□□ -1.59
PGBD4Q96DM1 AC022140.2-201ENST00000623500 188 ntBASIC5.14□□□□□ -1.59
PGBD4Q96DM1 MKKS-204ENST00000639674 192 ntBASIC5.14□□□□□ -1.59
PGBD4Q96DM1 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.14□□□□□ -1.59
PGBD4Q96DM1 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.14□□□□□ -1.59
PGBD4Q96DM1 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PGBD4Q96DM1 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.14□□□□□ -1.59
PGBD4Q96DM1 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
PGBD4Q96DM1 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PGBD4Q96DM1 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PGBD4Q96DM1 TEX21P-201ENST00000447107 1476 ntBASIC5.13□□□□□ -1.59
PGBD4Q96DM1 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
PGBD4Q96DM1 OR10J6P-201ENST00000289731 930 ntBASIC5.13□□□□□ -1.59
PGBD4Q96DM1 RNU6-1042P-201ENST00000384204 107 ntBASIC5.13□□□□□ -1.59
PGBD4Q96DM1 MIR129-1-201ENST00000384972 72 ntBASIC5.13□□□□□ -1.59
PGBD4Q96DM1 Z98745.1-201ENST00000402553 494 ntBASIC5.13□□□□□ -1.59
PGBD4Q96DM1 RPS3AP24-201ENST00000407896 734 ntBASIC5.13□□□□□ -1.59
PGBD4Q96DM1 RPL18P10-201ENST00000425606 538 ntBASIC5.13□□□□□ -1.59
PGBD4Q96DM1 RPL23AP1-201ENST00000428990 471 ntBASIC5.13□□□□□ -1.59
PGBD4Q96DM1 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC5.13□□□□□ -1.59
PGBD4Q96DM1 UBE2V1P3-201ENST00000439651 417 ntBASIC5.13□□□□□ -1.59
PGBD4Q96DM1 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.13□□□□□ -1.59
PGBD4Q96DM1 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC5.13□□□□□ -1.59
PGBD4Q96DM1 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.13□□□□□ -1.59
PGBD4Q96DM1 AC079168.2-201ENST00000453977 416 ntBASIC5.13□□□□□ -1.59
PGBD4Q96DM1 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PGBD4Q96DM1 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC5.13□□□□□ -1.59
PGBD4Q96DM1 RPL30P9-201ENST00000465586 330 ntBASIC5.13□□□□□ -1.59
PGBD4Q96DM1 AP000893.1-201ENST00000474462 794 ntBASIC5.13□□□□□ -1.59
PGBD4Q96DM1 RPL7P38-201ENST00000488396 739 ntBASIC5.13□□□□□ -1.59
PGBD4Q96DM1 HMGB1P21-201ENST00000502313 581 ntBASIC5.13□□□□□ -1.59
PGBD4Q96DM1 SNX5P1-201ENST00000505757 1041 ntBASIC5.13□□□□□ -1.59
PGBD4Q96DM1 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC5.13□□□□□ -1.59
PGBD4Q96DM1 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PGBD4Q96DM1 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC5.13□□□□□ -1.59
PGBD4Q96DM1 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.13□□□□□ -1.59
PGBD4Q96DM1 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC5.13□□□□□ -1.59
PGBD4Q96DM1 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC5.13□□□□□ -1.59
PGBD4Q96DM1 ADI1P3-201ENST00000549509 470 ntBASIC5.13□□□□□ -1.59
PGBD4Q96DM1 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.13□□□□□ -1.59
PGBD4Q96DM1 AC138915.2-201ENST00000569776 97 ntBASIC5.13□□□□□ -1.59
PGBD4Q96DM1 SNORA59B-202ENST00000578183 701 ntBASIC5.13□□□□□ -1.59
PGBD4Q96DM1 AC069061.3-201ENST00000582254 823 ntBASIC5.13□□□□□ -1.59
PGBD4Q96DM1 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC5.13□□□□□ -1.59
PGBD4Q96DM1 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC5.13□□□□□ -1.59
PGBD4Q96DM1 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC5.13□□□□□ -1.59
PGBD4Q96DM1 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.13□□□□□ -1.59
PGBD4Q96DM1 AC138932.5-201ENST00000617759 563 ntBASIC5.13□□□□□ -1.59
PGBD4Q96DM1 OR5AK4P-201ENST00000635912 903 ntBASIC5.13□□□□□ -1.59
PGBD4Q96DM1 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
PGBD4Q96DM1 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.13□□□□□ -1.59
PGBD4Q96DM1 AL592148.3-201ENST00000608771 2646 ntBASIC5.13□□□□□ -1.59
PGBD4Q96DM1 AC107982.1-201ENST00000507171 1300 ntBASIC5.13□□□□□ -1.59
PGBD4Q96DM1 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.13□□□□□ -1.59
PGBD4Q96DM1 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms