Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.35□□□□□ -1.71
CTHRC1Q96CG8 AL022322.2-201ENST00000624072 20397 ntBASIC4.35□□□□□ -1.71
CTHRC1Q96CG8 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CTHRC1Q96CG8 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.35□□□□□ -1.71
CTHRC1Q96CG8 AC011978.2-201ENST00000569835 2054 ntBASIC4.35□□□□□ -1.71
CTHRC1Q96CG8 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.35□□□□□ -1.71
CTHRC1Q96CG8 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CTHRC1Q96CG8 OR11H4-201ENST00000315409 1082 ntBASIC4.35□□□□□ -1.71
CTHRC1Q96CG8 RNY4P24-201ENST00000362735 96 ntBASIC4.35□□□□□ -1.71
CTHRC1Q96CG8 RNU6-1243P-201ENST00000364028 107 ntBASIC4.35□□□□□ -1.71
CTHRC1Q96CG8 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CTHRC1Q96CG8 RNU6-1226P-201ENST00000384317 107 ntBASIC4.35□□□□□ -1.71
CTHRC1Q96CG8 CYB5AP4-201ENST00000396692 399 ntBASIC4.35□□□□□ -1.71
CTHRC1Q96CG8 DHFRP6-201ENST00000401776 268 ntBASIC4.35□□□□□ -1.71
CTHRC1Q96CG8 MIR1271-201ENST00000408537 86 ntBASIC4.35□□□□□ -1.71
CTHRC1Q96CG8 NUP35P2-201ENST00000416748 943 ntBASIC4.35□□□□□ -1.71
CTHRC1Q96CG8 AC073136.2-201ENST00000417282 849 ntBASIC4.35□□□□□ -1.71
CTHRC1Q96CG8 AL358176.3-201ENST00000420757 454 ntBASIC4.35□□□□□ -1.71
CTHRC1Q96CG8 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.35□□□□□ -1.71
CTHRC1Q96CG8 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.35□□□□□ -1.71
CTHRC1Q96CG8 HSPE1P28-201ENST00000443139 211 ntBASIC4.35□□□□□ -1.71
CTHRC1Q96CG8 AC244505.5-201ENST00000443639 207 ntBASIC4.35□□□□□ -1.71
CTHRC1Q96CG8 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC4.35□□□□□ -1.71
CTHRC1Q96CG8 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CTHRC1Q96CG8 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.35□□□□□ -1.71
CTHRC1Q96CG8 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC4.35□□□□□ -1.71
CTHRC1Q96CG8 AC108751.2-201ENST00000469993 231 ntBASIC4.35□□□□□ -1.71
CTHRC1Q96CG8 RPL31P50-201ENST00000471002 296 ntBASIC4.35□□□□□ -1.71
CTHRC1Q96CG8 AC104563.1-201ENST00000476147 376 ntBASIC4.35□□□□□ -1.71
CTHRC1Q96CG8 AC023424.2-201ENST00000493479 777 ntBASIC4.35□□□□□ -1.71
CTHRC1Q96CG8 AC108941.1-201ENST00000502853 530 ntBASIC4.35□□□□□ -1.71
CTHRC1Q96CG8 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.35□□□□□ -1.71
CTHRC1Q96CG8 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.35□□□□□ -1.71
CTHRC1Q96CG8 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CTHRC1Q96CG8 AC108064.1-201ENST00000513791 460 ntBASIC4.35□□□□□ -1.71
CTHRC1Q96CG8 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC4.35□□□□□ -1.71
CTHRC1Q96CG8 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.35□□□□□ -1.71
CTHRC1Q96CG8 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.35□□□□□ -1.71
CTHRC1Q96CG8 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC4.35□□□□□ -1.71
CTHRC1Q96CG8 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.35□□□□□ -1.71
CTHRC1Q96CG8 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.35□□□□□ -1.71
CTHRC1Q96CG8 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CTHRC1Q96CG8 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.35□□□□□ -1.71
CTHRC1Q96CG8 AC087481.2-201ENST00000565492 330 ntBASIC4.35□□□□□ -1.71
CTHRC1Q96CG8 LARP7P2-201ENST00000575306 125 ntBASIC4.35□□□□□ -1.71
CTHRC1Q96CG8 MIR5697-201ENST00000578045 78 ntBASIC4.35□□□□□ -1.71
CTHRC1Q96CG8 RN7SL690P-201ENST00000582087 240 ntBASIC4.35□□□□□ -1.71
CTHRC1Q96CG8 TPMTP1-201ENST00000592307 737 ntBASIC4.35□□□□□ -1.71
CTHRC1Q96CG8 AC022916.3-201ENST00000592961 742 ntBASIC4.35□□□□□ -1.71
CTHRC1Q96CG8 AC073091.2-201ENST00000603205 907 ntBASIC4.35□□□□□ -1.71
CTHRC1Q96CG8 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC4.35□□□□□ -1.71
CTHRC1Q96CG8 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC4.35□□□□□ -1.71
CTHRC1Q96CG8 AC013476.2-201ENST00000614456 459 ntBASIC4.35□□□□□ -1.71
CTHRC1Q96CG8 MIR6780A-201ENST00000615089 68 ntBASIC4.35□□□□□ -1.71
CTHRC1Q96CG8 AC022106.2-201ENST00000620114 757 ntBASIC4.35□□□□□ -1.71
CTHRC1Q96CG8 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CTHRC1Q96CG8 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CTHRC1Q96CG8 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
CTHRC1Q96CG8 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CTHRC1Q96CG8 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CTHRC1Q96CG8 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
CTHRC1Q96CG8 ELL2P4-201ENST00000446870 1376 ntBASIC4.35□□□□□ -1.71
CTHRC1Q96CG8 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.35□□□□□ -1.71
CTHRC1Q96CG8 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CTHRC1Q96CG8 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CTHRC1Q96CG8 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CTHRC1Q96CG8 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CTHRC1Q96CG8 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.34□□□□□ -1.71
CTHRC1Q96CG8 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CTHRC1Q96CG8 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CTHRC1Q96CG8 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.34□□□□□ -1.71
CTHRC1Q96CG8 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CTHRC1Q96CG8 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.34□□□□□ -1.71
CTHRC1Q96CG8 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.34□□□□□ -1.71
CTHRC1Q96CG8 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CTHRC1Q96CG8 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
CTHRC1Q96CG8 MAPK10-349ENST00000641767 3661 ntBASIC4.34□□□□□ -1.71
CTHRC1Q96CG8 RNU6-777P-201ENST00000364265 104 ntBASIC4.34□□□□□ -1.71
CTHRC1Q96CG8 RNU6-533P-201ENST00000384144 107 ntBASIC4.34□□□□□ -1.71
CTHRC1Q96CG8 Y_RNA.582-201ENST00000391023 95 ntBASIC4.34□□□□□ -1.71
CTHRC1Q96CG8 MIR921-201ENST00000401133 56 ntBASIC4.34□□□□□ -1.71
CTHRC1Q96CG8 AL078595.1-201ENST00000404458 226 ntBASIC4.34□□□□□ -1.71
CTHRC1Q96CG8 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
CTHRC1Q96CG8 MTCO1P17-201ENST00000411522 491 ntBASIC4.34□□□□□ -1.71
CTHRC1Q96CG8 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.34□□□□□ -1.71
CTHRC1Q96CG8 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.34□□□□□ -1.71
CTHRC1Q96CG8 MTCO2P5-201ENST00000422621 426 ntBASIC4.34□□□□□ -1.71
CTHRC1Q96CG8 NPM1P34-201ENST00000428821 893 ntBASIC4.34□□□□□ -1.71
CTHRC1Q96CG8 CEACAMP1-201ENST00000434624 1035 ntBASIC4.34□□□□□ -1.71
CTHRC1Q96CG8 RPS3AP54-201ENST00000435535 734 ntBASIC4.34□□□□□ -1.71
CTHRC1Q96CG8 RPL12P46-201ENST00000436610 195 ntBASIC4.34□□□□□ -1.71
CTHRC1Q96CG8 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.34□□□□□ -1.71
CTHRC1Q96CG8 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.34□□□□□ -1.71
CTHRC1Q96CG8 GDI2P2-201ENST00000445131 608 ntBASIC4.34□□□□□ -1.71
CTHRC1Q96CG8 AL590365.1-201ENST00000450788 243 ntBASIC4.34□□□□□ -1.71
CTHRC1Q96CG8 KLF3P2-201ENST00000465138 268 ntBASIC4.34□□□□□ -1.71
CTHRC1Q96CG8 AL358832.1-201ENST00000497800 389 ntBASIC4.34□□□□□ -1.71
CTHRC1Q96CG8 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CTHRC1Q96CG8 NDUFB4P2-201ENST00000509515 391 ntBASIC4.34□□□□□ -1.71
CTHRC1Q96CG8 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms