Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
RFT1Q96AA3 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
RFT1Q96AA3 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RFT1Q96AA3 RPS4XP5-202ENST00000449995 1334 ntBASIC3.62□□□□□ -1.83
RFT1Q96AA3 AC109315.1-201ENST00000584143 1347 ntBASIC3.62□□□□□ -1.83
RFT1Q96AA3 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.62□□□□□ -1.83
RFT1Q96AA3 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RFT1Q96AA3 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RFT1Q96AA3 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
RFT1Q96AA3 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RFT1Q96AA3 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RFT1Q96AA3 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.61□□□□□ -1.83
RFT1Q96AA3 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.61□□□□□ -1.83
RFT1Q96AA3 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.61□□□□□ -1.83
RFT1Q96AA3 IPO8P1-201ENST00000455509 3109 ntBASIC3.61□□□□□ -1.83
RFT1Q96AA3 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.61□□□□□ -1.83
RFT1Q96AA3 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RFT1Q96AA3 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RFT1Q96AA3 ZNF29P-201ENST00000225587 168 ntBASIC3.61□□□□□ -1.83
RFT1Q96AA3 SNORA58B-201ENST00000364259 136 ntBASIC3.61□□□□□ -1.83
RFT1Q96AA3 HMGN2P8-201ENST00000391458 268 ntBASIC3.61□□□□□ -1.83
RFT1Q96AA3 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RFT1Q96AA3 ERHP2-201ENST00000402323 299 ntBASIC3.61□□□□□ -1.83
RFT1Q96AA3 SNORA11F-201ENST00000408237 128 ntBASIC3.61□□□□□ -1.83
RFT1Q96AA3 AL161449.1-201ENST00000414531 1199 ntBASIC3.61□□□□□ -1.83
RFT1Q96AA3 AL513175.2-201ENST00000422071 443 ntBASIC3.61□□□□□ -1.83
RFT1Q96AA3 GTF2IP23-201ENST00000423746 351 ntBASIC3.61□□□□□ -1.83
RFT1Q96AA3 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.61□□□□□ -1.83
RFT1Q96AA3 AC092648.1-201ENST00000425870 423 ntBASIC3.61□□□□□ -1.83
RFT1Q96AA3 AL035410.1-201ENST00000427409 427 ntBASIC3.61□□□□□ -1.83
RFT1Q96AA3 RPL23AP1-201ENST00000428990 471 ntBASIC3.61□□□□□ -1.83
RFT1Q96AA3 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.61□□□□□ -1.83
RFT1Q96AA3 USP9YP24-201ENST00000434374 697 ntBASIC3.61□□□□□ -1.83
RFT1Q96AA3 AL356276.2-201ENST00000435919 558 ntBASIC3.61□□□□□ -1.83
RFT1Q96AA3 USP9YP17-201ENST00000444617 696 ntBASIC3.61□□□□□ -1.83
RFT1Q96AA3 AF213884.1-201ENST00000488102 463 ntBASIC3.61□□□□□ -1.83
RFT1Q96AA3 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.61□□□□□ -1.83
RFT1Q96AA3 AC078918.1-201ENST00000498515 228 ntBASIC3.61□□□□□ -1.83
RFT1Q96AA3 RNU2-58P-201ENST00000516403 183 ntBASIC3.61□□□□□ -1.83
RFT1Q96AA3 RNA5SP519-201ENST00000516480 119 ntBASIC3.61□□□□□ -1.83
RFT1Q96AA3 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.61□□□□□ -1.83
RFT1Q96AA3 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.61□□□□□ -1.83
RFT1Q96AA3 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.61□□□□□ -1.83
RFT1Q96AA3 OR8G5-201ENST00000524943 1041 ntBASIC3.61□□□□□ -1.83
RFT1Q96AA3 AP003385.6-201ENST00000531603 374 ntBASIC3.61□□□□□ -1.83
RFT1Q96AA3 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.61□□□□□ -1.83
RFT1Q96AA3 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.61□□□□□ -1.83
RFT1Q96AA3 AC008127.2-201ENST00000549925 1075 ntBASIC3.61□□□□□ -1.83
RFT1Q96AA3 AL132857.1-201ENST00000555180 708 ntBASIC3.61□□□□□ -1.83
RFT1Q96AA3 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC3.61□□□□□ -1.83
RFT1Q96AA3 AC090888.2-201ENST00000559765 1144 ntBASIC3.61□□□□□ -1.83
RFT1Q96AA3 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.61□□□□□ -1.83
RFT1Q96AA3 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC3.61□□□□□ -1.83
RFT1Q96AA3 AC107954.1-201ENST00000565906 727 ntBASIC3.61□□□□□ -1.83
RFT1Q96AA3 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC3.61□□□□□ -1.83
RFT1Q96AA3 AL669831.4-202ENST00000590817 238 ntBASIC3.61□□□□□ -1.83
RFT1Q96AA3 BNIP3P38-201ENST00000601117 544 ntBASIC3.61□□□□□ -1.83
RFT1Q96AA3 AC013244.3-201ENST00000605614 388 ntBASIC3.61□□□□□ -1.83
RFT1Q96AA3 AC140725.3-201ENST00000616193 880 ntBASIC3.61□□□□□ -1.83
RFT1Q96AA3 AC231759.1-201ENST00000616455 597 ntBASIC3.61□□□□□ -1.83
RFT1Q96AA3 AP005264.7-201ENST00000625003 745 ntBASIC3.61□□□□□ -1.83
RFT1Q96AA3 UGP2-231ENST00000627474 264 ntTSL 5 BASIC3.61□□□□□ -1.83
RFT1Q96AA3 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC3.61□□□□□ -1.83
RFT1Q96AA3 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
RFT1Q96AA3 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RFT1Q96AA3 GABPAP-201ENST00000419271 1356 ntBASIC3.61□□□□□ -1.83
RFT1Q96AA3 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RFT1Q96AA3 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.6□□□□□ -1.83
RFT1Q96AA3 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RFT1Q96AA3 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.6□□□□□ -1.83
RFT1Q96AA3 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RFT1Q96AA3 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC3.6□□□□□ -1.83
RFT1Q96AA3 AL158163.1-201ENST00000603915 1649 ntBASIC3.6□□□□□ -1.83
RFT1Q96AA3 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.6□□□□□ -1.83
RFT1Q96AA3 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RFT1Q96AA3 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
RFT1Q96AA3 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
RFT1Q96AA3 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
RFT1Q96AA3 AC079741.1-201ENST00000321498 212 ntBASIC3.6□□□□□ -1.83
RFT1Q96AA3 Y_RNA.25-201ENST00000362528 102 ntBASIC3.6□□□□□ -1.83
RFT1Q96AA3 RNU4-68P-201ENST00000364314 141 ntBASIC3.6□□□□□ -1.83
RFT1Q96AA3 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
RFT1Q96AA3 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
RFT1Q96AA3 MIR129-1-201ENST00000384972 72 ntBASIC3.6□□□□□ -1.83
RFT1Q96AA3 MT-TC-201ENST00000387405 66 ntBASIC3.6□□□□□ -1.83
RFT1Q96AA3 FNDC3CP-201ENST00000420795 1155 ntBASIC3.6□□□□□ -1.83
RFT1Q96AA3 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC3.6□□□□□ -1.83
RFT1Q96AA3 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RFT1Q96AA3 AL157831.1-201ENST00000426134 473 ntBASIC3.6□□□□□ -1.83
RFT1Q96AA3 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.6□□□□□ -1.83
RFT1Q96AA3 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.6□□□□□ -1.83
RFT1Q96AA3 AL772161.1-201ENST00000439130 476 ntBASIC3.6□□□□□ -1.83
RFT1Q96AA3 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.6□□□□□ -1.83
RFT1Q96AA3 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC3.6□□□□□ -1.83
RFT1Q96AA3 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC3.6□□□□□ -1.83
RFT1Q96AA3 AC007327.1-201ENST00000447461 264 ntBASIC3.6□□□□□ -1.83
RFT1Q96AA3 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC3.6□□□□□ -1.83
RFT1Q96AA3 PTGES3P5-201ENST00000455109 434 ntBASIC3.6□□□□□ -1.83
RFT1Q96AA3 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC3.6□□□□□ -1.83
RFT1Q96AA3 RN7SL98P-201ENST00000462271 300 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms